Project measure / variable:   Schoonjans1   bw_pre_gluc_kinetic_CD

ID, description, units MPD:112634   bw_pre_gluc_kinetic_CD   body weight prior to glucose kinetic test, at 20 wks of age   [g]  CD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schoonjans1 - body weight prior to glucose kinetic test, at 20 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means32.238   g
Median of the strain means31.241   g
SD of the strain means± 3.7709
Coefficient of variation (CV)0.117
Min–max range of strain means25.89   –   40.506   g
Mean sample size per strain4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 2402.1786 68.6337 7.5171 < 0.0001
Residuals 137 1250.8642 9.1304


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 28.05 1.4158   5 0.63315 0.0505 26.44, 30.26 -1.11
BXD100 m 38.314 1.7053   5 0.76264 0.0445 35.8, 40.58 1.61
BXD11 m 30.332 2.2902   4 1.1451 0.0755 27.68, 33.05 -0.51
BXD12 m 29.867 1.0618   4 0.53092 0.0356 28.35, 30.82 -0.63
BXD27 m 29.718 4.6733   4 2.3367 0.1573 25.75, 36.05 -0.67
BXD32 m 30.374 2.0163   5 0.90171 0.0664 27.4, 32.39 -0.49
BXD34 m 33.828 2.2115   5 0.989 0.0654 30.27, 35.47 0.42
BXD39 m 35.744 5.6926   5 2.5458 0.1593 29.73, 43.77 0.93
BXD40 m 28.706 2.4764   5 1.1075 0.0863 24.68, 31.4 -0.94
BXD43 m 38.658 5.6261   5 2.5161 0.1455 32.32, 47.75 1.7
BXD45 m 28.598 2.0964   4 1.0482 0.0733 27.31, 31.71 -0.97
BXD48 m 30.826 4.3635   5 1.9514 0.1416 26.18, 37.92 -0.37
BXD48a m 36.08 2.7659   4 1.3829 0.0767 32.88, 39.39 1.02
BXD49 m 40.506 2.1577   5 0.96497 0.0533 37.26, 42.59 2.19
BXD51 m 27.39 3.3118   5 1.4811 0.1209 22.82, 30.62 -1.29
BXD53 m 31.262 1.9215   5 0.85933 0.0615 29.2, 33.5 -0.26
BXD55 m 29.604 0.95516   5 0.42716 0.0323 28.45, 30.96 -0.7
BXD6 m 28.794 2.6725   5 1.1952 0.0928 25.91, 31.36 -0.91
BXD62 m 31.884 4.205   5 1.8805 0.1319 26.36, 37.7 -0.09
BXD63 m 36.062 3.0631   5 1.3698 0.0849 32.99, 40.19 1.01
BXD64 m 32.95 1.9822   5 0.88645 0.0602 30.78, 35.77 0.19
BXD66 m 34.106 3.5082   5 1.5689 0.1029 30.72, 39.8 0.5
BXD67 m 31.117 0.89078   4 0.44539 0.0286 30.28, 32.37 -0.3
BXD69 m 37.438 0.94121   5 0.42092 0.0251 36.0, 38.31 1.38
BXD73 m 31.22 1.7512   5 0.78315 0.0561 29.37, 33.7 -0.27
BXD75 m 35.018 1.8078   5 0.80845 0.0516 32.55, 37.28 0.74
BXD77 m 35.336 2.3261   5 1.0403 0.0658 32.51, 38.55 0.82
BXD79 m 34.638 4.4543   5 1.992 0.1286 30.0, 41.18 0.64
BXD8 m 26.876 0.68105   5 0.30458 0.0253 25.96, 27.85 -1.42
BXD81 m 25.89 5.1944   4 2.5972 0.2006 21.45, 33.4 -1.68
BXD84 m 38.004 3.7386   5 1.672 0.0984 31.88, 41.92 1.53
BXD87 m 26.548 0.84446   5 0.37766 0.0318 25.55, 27.76 -1.51
BXD89 m 30.23 3.3062   5 1.4786 0.1094 27.14, 34.69 -0.53
BXD90 m 30.59 2.1266   5 0.95104 0.0695 28.52, 33.28 -0.44
C57BL/6J m 32.628 1.8895   5 0.84501 0.0579 30.47, 35.65 0.1
DBA/2J m 33.376 4.6119   5 2.0625 0.1382 28.08, 38.7 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 28.05 1.3513249378 30.72215211 25.37784789
BXD100 m 38.314 1.3513249378 40.98615211 35.64184789
BXD11 m 30.3325 1.5108272103 33.3200568821 27.3449431179
BXD12 m 29.8675 1.5108272103 32.8550568821 26.8799431179
BXD27 m 29.7175 1.5108272103 32.7050568821 26.7299431179
BXD32 m 30.374 1.3513249378 33.04615211 27.70184789
BXD34 m 33.828 1.3513249378 36.50015211 31.15584789
BXD39 m 35.744 1.3513249378 38.41615211 33.07184789
BXD40 m 28.706 1.3513249378 31.37815211 26.03384789
BXD43 m 38.658 1.3513249378 41.33015211 35.98584789
BXD45 m 28.5975 1.5108272103 31.5850568821 25.6099431179
BXD48 m 30.826 1.3513249378 33.49815211 28.15384789
BXD48a m 36.08 1.5108272103 39.0675568821 33.0924431179
BXD49 m 40.506 1.3513249378 43.17815211 37.83384789
BXD51 m 27.39 1.3513249378 30.06215211 24.71784789
BXD53 m 31.262 1.3513249378 33.93415211 28.58984789
BXD55 m 29.604 1.3513249378 32.27615211 26.93184789
BXD6 m 28.794 1.3513249378 31.46615211 26.12184789
BXD62 m 31.884 1.3513249378 34.55615211 29.21184789
BXD63 m 36.062 1.3513249378 38.73415211 33.38984789
BXD64 m 32.95 1.3513249378 35.62215211 30.27784789
BXD66 m 34.106 1.3513249378 36.77815211 31.43384789
BXD67 m 31.1175 1.5108272103 34.1050568821 28.1299431179
BXD69 m 37.438 1.3513249378 40.11015211 34.76584789
BXD73 m 31.22 1.3513249378 33.89215211 28.54784789
BXD75 m 35.018 1.3513249378 37.69015211 32.34584789
BXD77 m 35.336 1.3513249378 38.00815211 32.66384789
BXD79 m 34.638 1.3513249378 37.31015211 31.96584789
BXD8 m 26.876 1.3513249378 29.54815211 24.20384789
BXD81 m 25.89 1.5108272103 28.8775568821 22.9024431179
BXD84 m 38.004 1.3513249378 40.67615211 35.33184789
BXD87 m 26.548 1.3513249378 29.22015211 23.87584789
BXD89 m 30.23 1.3513249378 32.90215211 27.55784789
BXD90 m 30.59 1.3513249378 33.26215211 27.91784789
C57BL/6J m 32.628 1.3513249378 35.30015211 29.95584789
DBA/2J m 33.376 1.3513249378 36.04815211 30.70384789




  GWAS USING LINEAR MIXED MODELS