Project measure / variable:   Noll1   Total_IgG_d7

ID, description, units MPD:112627   Total_IgG_d7   total immunoglobulin G (serum IgG) area under curve (AUC) post-infection   [AUC]  day 7  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   37 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - total immunoglobulin G (serum IgG) area under curve (AUC) post-infection day 7



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested37 strains
Mean of the strain means0.73728   AUC
Median of the strain means0.53368   AUC
SD of the strain means± 0.58051
Coefficient of variation (CV)0.7874
Min–max range of strain means0.08658   –   2.2701   AUC
Mean sample size per strain3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 37.358 1.1321 4.525 < 0.0001
Residuals 88 22.0157 0.2502


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 1.1013 1.5193   2   1.0743 1.3796 0.02696, 2.1756 0.63
RIX:CC(003 x 051) f 0.17716 0.13249   3 0.07649 0.7479 0.06196, 0.32194 -0.96
RIX:CC(003 x 062) f 1.3346 0.63917   3 0.36903 0.4789 0.84026, 2.0564 1.03
RIX:CC(005 x 038) f 0.49281 0.41052   6 0.16759 0.833 0.18776, 1.287 -0.42
RIX:CC(007 x 075) f 1.517 1.1928   2   0.84341 0.7863 0.67357, 2.3604 1.34
RIX:CC(013 x 041) f 0.44725 0.32422   6 0.13236 0.7249 0.04989, 0.98284 -0.5
RIX:CC(015 x 018) f 2.2701 0.88001   4 0.44 0.3877 1.3665, 3.4492 2.64
RIX:CC(015 x 059) f 1.3598 0.43332   3 0.25018 0.3187 0.86282, 1.6583 1.07
RIX:CC(016 x 038) f 0.48715 0.24879   3 0.14364 0.5107 0.30653, 0.77092 -0.43
RIX:CC(017 x 041) f 0.56506 0.65771   3 0.37973 1.164 0.10957, 1.3191 -0.3
RIX:CC(018 x 009) f 0.53368 0.27797   3 0.16049 0.5209 0.26226, 0.81777 -0.35
RIX:CC(018 x 065) f 0.17318 0.0   1   0.0 0.0 0.17318, 0.17318 -0.97
RIX:CC(019 x 002) f 0.58498 0.26137   6 0.10671 0.4468 0.27058, 0.9723 -0.26
RIX:CC(025 x 028) f 0.35958 0.43444   3 0.25082 1.2082 0.03846, 0.8539 -0.65
RIX:CC(026 x 034) f 1.758 0.59899   2   0.42355 0.3407 1.3345, 2.1816 1.76
RIX:CC(032 x 013) f 0.23845 0.13048   4 0.06524 0.5472 0.16569, 0.4337 -0.86
RIX:CC(032 x 017) f 1.4856 0.66836   4 0.33418 0.4499 0.68509, 2.3214 1.29
RIX:CC(035 x 020) f 0.81462 0.37082   4 0.18541 0.4552 0.54484, 1.3468 0.13
RIX:CC(035 x 071) f 0.35992 0.14002   2   0.09901 0.389 0.26091, 0.45893 -0.65
RIX:CC(037 x 046) f 0.11132 0.06777   3 0.03913 0.6088 0.05738, 0.18739 -1.08
RIX:CC(037 x 057) f 0.31002 0.24158   4 0.12079 0.7793 0.11446, 0.62928 -0.74
RIX:CC(038 x 013) f 0.30519 0.1825   3 0.10536 0.598 0.19235, 0.51574 -0.74
RIX:CC(041 x 016) f 0.24036 0.06649   5 0.02974 0.2766 0.20531, 0.35908 -0.86
RIX:CC(042 x 017) f 0.95089 0.0   1   0.0 0.0 0.95089, 0.95089 0.37
RIX:CC(042 x 019) f 0.529 0.37976   3 0.21926 0.7179 0.16213, 0.92046 -0.36
RIX:CC(043 x 037) f 1.2697 0.75698   9 0.25233 0.5962 0.32951, 2.7041 0.92
RIX:CC(051 x 005) f 0.21697 0.35953   4 0.17977 1.6571 0.00412417, 0.75438 -0.9
RIX:CC(051 x 009) f 1.168 0.77982   3 0.45023 0.6677 0.57409, 2.0511 0.74
RIX:CC(052 x 007) f 2.0824 0.82802   2   0.5855 0.3976 1.4969, 2.6679 2.32
RIX:CC(057 x 052) f 0.79352 0.49712   3 0.28701 0.6265 0.4142, 1.3563 0.1
RIX:CC(058 x 022) f 0.12677 0.08645   5 0.03866 0.682 0.05353, 0.27121 -1.05
RIX:CC(059 x 065) f 0.08658 0.0   1   0.0 0.0 0.08658, 0.08658 -1.12
RIX:CC(062 x 046) f 1.0758 0.07817   3 0.04513 0.0727 1.0118, 1.1629 0.58
RIX:CC(063 x 002) f 0.10844 0.03579   3 0.02066 0.33 0.08619, 0.14972 -1.08
RIX:CC(074 x 058) f 0.81296 0.80652   3 0.46564 0.9921 0.24796, 1.7366 0.13
RIX:CC(074 x 062) f 0.80146 0.15553   3 0.0898 0.1941 0.62207, 0.89865 0.11
RIX:CC(075 x 035) f 0.22956 0.02937   3 0.01696 0.1279 0.19605, 0.25084 -0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 1.10128 0.3536791346 1.8041429596 0.3984170404
RIX:CC(003 x 051) f 0.1771566667 0.2887778041 0.75104187 -0.3967285367
RIX:CC(003 x 062) f 1.33462 0.2887778041 1.9085052033 0.7607347967
RIX:CC(005 x 038) f 0.4928083333 0.2041967436 0.8986064522 0.0870102144
RIX:CC(007 x 075) f 1.516985 0.3536791346 2.2198479596 0.8141220404
RIX:CC(013 x 041) f 0.4472466667 0.2041967436 0.8530447856 0.0414485478
RIX:CC(015 x 018) f 2.270075 0.2500889144 2.767074165 1.773075835
RIX:CC(015 x 059) f 1.35984 0.2887778041 1.9337252033 0.7859547967
RIX:CC(016 x 038) f 0.4871466667 0.2887778041 1.06103187 -0.0867385367
RIX:CC(017 x 041) f 0.5650633333 0.2887778041 1.1389485367 -0.00882187
RIX:CC(018 x 009) f 0.5336833333 0.2887778041 1.1075685367 -0.04020187
RIX:CC(019 x 002) f 0.58498 0.2041967436 0.9907781189 0.1791818811
RIX:CC(025 x 028) f 0.3595766667 0.2887778041 0.93346187 -0.2143085367
RIX:CC(026 x 034) f 1.75805 0.3536791346 2.4609129596 1.0551870404
RIX:CC(032 x 013) f 0.2384475 0.2500889144 0.735446665 -0.258551665
RIX:CC(032 x 017) f 1.4856475 0.2500889144 1.982646665 0.988648335
RIX:CC(035 x 020) f 0.81462 0.2500889144 1.311619165 0.317620835
RIX:CC(035 x 071) f 0.35992 0.3536791346 1.0627829596 -0.3429429596
RIX:CC(037 x 046) f 0.1113166667 0.2887778041 0.68520187 -0.4625685367
RIX:CC(037 x 057) f 0.3100175 0.2500889144 0.807016665 -0.186981665
RIX:CC(038 x 013) f 0.3051933333 0.2887778041 0.8790785367 -0.26869187
RIX:CC(041 x 016) f 0.240356 0.2236863252 0.684885567 -0.204173567
RIX:CC(042 x 019) f 0.5289966667 0.2887778041 1.10288187 -0.0448885367
RIX:CC(043 x 037) f 1.2696833333 0.166725943 1.60101611 0.9383505567
RIX:CC(051 x 005) f 0.2169685425 0.2500889144 0.7139677075 -0.2800306225
RIX:CC(051 x 009) f 1.1679866667 0.2887778041 1.74187187 0.5941014633
RIX:CC(052 x 007) f 2.0824 0.3536791346 2.7852629596 1.3795370404
RIX:CC(057 x 052) f 0.79352 0.2887778041 1.3674052033 0.2196347967
RIX:CC(058 x 022) f 0.126768 0.2236863252 0.571297567 -0.317761567
RIX:CC(062 x 046) f 1.0757666667 0.2887778041 1.64965187 0.5018814633
RIX:CC(063 x 002) f 0.1084366667 0.2887778041 0.68232187 -0.4654485367
RIX:CC(074 x 058) f 0.8129633333 0.2887778041 1.3868485367 0.23907813
RIX:CC(074 x 062) f 0.8014566667 0.2887778041 1.37534187 0.2275714633
RIX:CC(075 x 035) f 0.2295566667 0.2887778041 0.80344187 -0.3443285367




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA