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Project measure / variable:   Noll1   IgG3_d45

ID, description, units MPD:112626   IgG3_d45   immunoglobulin G3 (serum IgG3) area under curve (AUC) post-infection   [AUC]  day 45  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   34 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin G3 (serum IgG3) area under curve (AUC) post-infection day 45



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means2.0924   AUC
Median of the strain means1.6582   AUC
SD of the strain means± 1.7282
Coefficient of variation (CV)0.8259
Min–max range of strain means0.32584   –   6.825   AUC
Mean sample size per strain3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 28 396.782 14.1708 6.7373 < 0.0001
Residuals 77 161.9576 2.1033


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 2.2535 1.406   3 0.81174 0.6239 1.3912, 3.8759 0.09
RIX:CC(003 x 051) f 1.9738 1.4049   3 0.81111 0.7118 0.89497, 3.5624 -0.07
RIX:CC(003 x 062) f 6.1213 1.6956   8 0.5995 0.277 2.6138, 7.6551 2.33
RIX:CC(007 x 075) f 1.1409 0.0   1   0.0 0.0 1.1409, 1.1409 -0.55
RIX:CC(013 x 026) f 1.7961 1.1648   3 0.6725 0.6485 0.4527, 2.5239 -0.17
RIX:CC(013 x 041) f 0.83949 1.1194   6 0.457 1.3334 0.18165, 3.1003 -0.72
RIX:CC(015 x 018) f 4.5611 2.9207   2   2.0653 0.6403 2.4959, 6.6264 1.43
RIX:CC(015 x 059) f 0.64651 0.0   1   0.0 0.0 0.64651, 0.64651 -0.84
RIX:CC(016 x 038) f 6.825 1.2981   6 0.52993 0.1902 4.9858, 8.322 2.74
RIX:CC(017 x 041) f 3.1921 1.7854   3 1.0308 0.5593 1.2637, 4.7876 0.64
RIX:CC(018 x 009) f 3.0477 1.7026   6 0.6951 0.5587 1.2907, 6.0762 0.55
RIX:CC(018 x 065) f 0.7211 0.59432   3 0.34313 0.8242 0.18642, 1.361 -0.79
RIX:CC(019 x 002) f 3.3384 1.9769   4 0.98843 0.5922 0.43446, 4.8606 0.72
RIX:CC(025 x 028) f 1.7177 0.1611   3 0.09301 0.0938 1.5542, 1.8763 -0.22
RIX:CC(026 x 034) f 1.7417 1.6527   4 0.82636 0.9489 0.26608, 3.9467 -0.2
RIX:CC(028 x 030) f 2.1422 2.7088   5 1.2114 1.2645 0.38745, 6.9332 0.03
RIX:CC(032 x 017) f 1.4033 1.0994   3 0.63473 0.7834 0.45455, 2.6081 -0.4
RIX:CC(034 x 016) f 3.4532 1.5215   4 0.76073 0.4406 1.5505, 4.9556 0.79
RIX:CC(035 x 020) f 1.604 0.3457   2   0.24445 0.2155 1.3596, 1.8485 -0.28
RIX:CC(035 x 071) f 0.97101 1.2749   2   0.90149 1.313 0.06952, 1.8725 -0.65
RIX:CC(037 x 057) f 0.47374 0.0   1   0.0 0.0 0.47374, 0.47374 -0.94
RIX:CC(038 x 013) f 1.5001 1.4762   2   1.0438 0.984 0.4563, 2.5439 -0.34
RIX:CC(041 x 016) f 0.87765 0.73067   4 0.36534 0.8325 0.11328, 1.5826 -0.7
RIX:CC(042 x 017) f 5.3402 1.8398   5 0.82279 0.3445 2.1117, 6.5124 1.88
RIX:CC(042 x 019) f 1.7123 0.36311   3 0.20964 0.2121 1.3478, 2.074 -0.22
RIX:CC(043 x 037) f 0.74872 0.24858   2   0.17577 0.332 0.57295, 0.92449 -0.78
RIX:CC(051 x 005) f 0.75268 0.19126   3 0.11042 0.2541 0.5441, 0.91981 -0.78
RIX:CC(051 x 009) f 0.67753 0.33499   3 0.1934 0.4944 0.36832, 1.0334 -0.82
RIX:CC(057 x 052) f 0.3926 0.14394   4 0.07197 0.3666 0.18497, 0.5027 -0.98
RIX:CC(062 x 046) f 0.60906 0.57558   4 0.28779 0.945 0.09392, 1.2921 -0.86
RIX:CC(063 x 002) f 1.8151 1.4235   3 0.82186 0.7843 0.78265, 3.439 -0.16
RIX:CC(074 x 062) f 0.32584 0.0   1   0.0 0.0 0.32584, 0.32584 -1.02
RIX:CC(075 x 021) f 5.2073 0.0   1   0.0 0.0 5.2073, 5.2073 1.8
RIX:CC(075 x 035) f 1.2174 1.2122   3 0.69987 0.9958 0.34841, 2.6022 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 2.2535 0.8373261713 3.920829419 0.586170581
RIX:CC(003 x 051) f 1.97379 0.8373261713 3.641119419 0.306460581
RIX:CC(003 x 062) f 6.1212875 0.512755467 7.1423140774 5.1002609226
RIX:CC(013 x 026) f 1.7961333333 0.8373261713 3.4634627524 0.1288039143
RIX:CC(013 x 041) f 0.839495 0.5920790138 2.0184749387 -0.3394849387
RIX:CC(015 x 018) f 4.56115 1.025510934 6.6032031549 2.5190968451
RIX:CC(016 x 038) f 6.8250333333 0.5920790138 8.004013272 5.6460533947
RIX:CC(017 x 041) f 3.1920666667 0.8373261713 4.8593960857 1.5247372476
RIX:CC(018 x 009) f 3.0477333333 0.5920790138 4.226713272 1.8687533947
RIX:CC(018 x 065) f 0.7211 0.8373261713 2.388429419 -0.946229419
RIX:CC(019 x 002) f 3.338365 0.7251457356 4.7823146334 1.8944153666
RIX:CC(025 x 028) f 1.7176666667 0.8373261713 3.3849960857 0.0503372476
RIX:CC(026 x 034) f 1.74167 0.7251457356 3.1856196334 0.2977203666
RIX:CC(028 x 030) f 2.142232 0.6485900634 3.4337398145 0.8507241855
RIX:CC(032 x 017) f 1.4032833333 0.8373261713 3.0706127524 -0.2640460857
RIX:CC(034 x 016) f 3.45325 0.7251457356 4.8971996334 2.0093003666
RIX:CC(035 x 020) f 1.60405 1.025510934 3.6461031549 -0.4380031549
RIX:CC(035 x 071) f 0.97101 1.025510934 3.0130631549 -1.0710431549
RIX:CC(038 x 013) f 1.5001 1.025510934 3.5421531549 -0.5419531549
RIX:CC(041 x 016) f 0.877645 0.7251457356 2.3215946334 -0.5663046334
RIX:CC(042 x 017) f 5.34016 0.6485900634 6.6316678145 4.0486521855
RIX:CC(042 x 019) f 1.7122666667 0.8373261713 3.3795960857 0.0449372476
RIX:CC(043 x 037) f 0.74872 1.025510934 2.7907731549 -1.2933331549
RIX:CC(051 x 005) f 0.7526833333 0.8373261713 2.4200127524 -0.9146460857
RIX:CC(051 x 009) f 0.67753 0.8373261713 2.344859419 -0.989799419
RIX:CC(057 x 052) f 0.3926 0.7251457356 1.8365496334 -1.0513496334
RIX:CC(062 x 046) f 0.609055 0.7251457356 2.0530046334 -0.8348946334
RIX:CC(063 x 002) f 1.8151166667 0.8373261713 3.4824460857 0.1477872476
RIX:CC(075 x 035) f 1.2173766667 0.8373261713 2.8847060857 -0.4499527524




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA