Project measure / variable:   Noll1   IgG2b_d10

ID, description, units MPD:112618   IgG2b_d10   immunoglobulin G2b (serum IgG2b) area under curve (AUC) post-infection   [AUC]  day 10  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   39 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin G2b (serum IgG2b) area under curve (AUC) post-infection day 10



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested39 strains
Mean of the strain means2.0316   AUC
Median of the strain means1.8468   AUC
SD of the strain means± 1.2269
Coefficient of variation (CV)0.6039
Min–max range of strain means0.25179   –   4.5685   AUC
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 163.9878 4.6854 4.6481 < 0.0001
Residuals 97 97.7778 1.008


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 1.9996 1.5532   3 0.89672 0.7767 0.23293, 3.1501 -0.03
RIX:CC(003 x 051) f 1.3487 0.74528   3 0.43029 0.5526 0.65994, 2.1399 -0.56
RIX:CC(005 x 020) f 1.4167 0.82631   3 0.47707 0.5833 0.70841, 2.3245 -0.5
RIX:CC(007 x 075) f 1.7988 0.51492   4 0.25746 0.2863 1.1607, 2.2353 -0.19
RIX:CC(013 x 026) f 1.8468 0.8425   5 0.37678 0.4562 0.82579, 3.0927 -0.15
RIX:CC(013 x 041) f 0.86483 0.31482   8 0.11131 0.364 0.55274, 1.4989 -0.95
RIX:CC(015 x 018) f 3.7578 0.49868   3 0.28791 0.1327 3.1906, 4.1275 1.41
RIX:CC(015 x 059) f 1.2431 0.08015   3 0.04627 0.0645 1.1563, 1.3143 -0.64
RIX:CC(016 x 038) f 3.8824 0.24676   3 0.14247 0.0636 3.6188, 4.1079 1.51
RIX:CC(017 x 041) f 0.52405 0.01497   2   0.01059 0.0286 0.51347, 0.53464 -1.23
RIX:CC(018 x 009) f 4.4942 1.1693   2   0.8268 0.2602 3.6674, 5.321 2.01
RIX:CC(018 x 065) f 1.4281 0.00556447   3 0.00321265 0.0039 1.4217, 1.432 -0.49
RIX:CC(019 x 002) f 2.7696 1.9153   6 0.78191 0.6915 0.55683, 5.4974 0.6
RIX:CC(025 x 028) f 0.94523 0.36793   4 0.18397 0.3892 0.66573, 1.4624 -0.89
RIX:CC(026 x 034) f 0.84549 0.20296   4 0.10148 0.2401 0.68357, 1.1277 -0.97
RIX:CC(028 x 030) f 2.2929 1.5048   5 0.67294 0.6563 0.84024, 3.9771 0.21
RIX:CC(032 x 013) f 1.4028 1.1051   7 0.41767 0.7878 0.58544, 3.0134 -0.51
RIX:CC(032 x 017) f 2.6764 0.04632   2   0.03275 0.0173 2.6437, 2.7092 0.53
RIX:CC(034 x 016) f 2.4406 1.2289   3 0.70948 0.5035 1.2356, 3.692 0.33
RIX:CC(035 x 071) f 1.8625 0.90451   3 0.52222 0.4856 1.1932, 2.8915 -0.14
RIX:CC(037 x 046) f 0.25179 0.27833   3 0.1607 1.1054 0.08787, 0.57316 -1.45
RIX:CC(037 x 057) f 3.5999 0.22259   3 0.12851 0.0618 3.3432, 3.7388 1.28
RIX:CC(038 x 013) f 0.73432 0.45665   3 0.26365 0.6219 0.29685, 1.208 -1.06
RIX:CC(041 x 016) f 0.58247 0.37   3 0.21362 0.6352 0.15801, 0.83687 -1.18
RIX:CC(042 x 017) f 1.5147 0.0   1   0.0 0.0 1.5147, 1.5147 -0.42
RIX:CC(042 x 019) f 3.3079 0.97248   2   0.68765 0.294 2.6203, 3.9956 1.04
RIX:CC(042 x 025) f 0.42532 0.15224   3 0.0879 0.3579 0.25416, 0.54563 -1.31
RIX:CC(043 x 037) f 1.9709 1.3885   9 0.46283 0.7045 0.02194, 3.7455 -0.05
RIX:CC(051 x 005) f 1.6901 1.1392   4 0.5696 0.6741 0.4651, 3.0068 -0.28
RIX:CC(051 x 009) f 1.9013 0.11073   2   0.0783 0.0582 1.823, 1.9796 -0.11
RIX:CC(052 x 007) f 4.099 0.54669   3 0.31563 0.1334 3.4974, 4.5654 1.69
RIX:CC(057 x 052) f 4.4602 1.3847   3 0.79946 0.3105 2.8748, 5.4327 1.98
RIX:CC(058 x 022) f 2.9061 0.0   1   0.0 0.0 2.9061, 2.9061 0.71
RIX:CC(062 x 046) f 2.0853 0.86026   3 0.49667 0.4125 1.448, 3.0638 0.04
RIX:CC(063 x 002) f 0.39438 0.10451   4 0.05226 0.265 0.2621, 0.51741 -1.33
RIX:CC(074 x 058) f 4.5685 3.4288   2   2.4245 0.7505 2.144, 6.993 2.07
RIX:CC(074 x 062) f 1.2813 0.0   1   0.0 0.0 1.2813, 1.2813 -0.61
RIX:CC(075 x 021) f 2.1462 0.74626   8 0.26384 0.3477 1.1209, 3.3444 0.09
RIX:CC(075 x 035) f 1.472 1.1701   2   0.82742 0.7949 0.64457, 2.2994 -0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 1.9996433333 0.5796605248 3.150109017 0.8491776497
RIX:CC(003 x 051) f 1.34868 0.5796605248 2.4991456837 0.1982143163
RIX:CC(005 x 020) f 1.4167033333 0.5796605248 2.567169017 0.2662376497
RIX:CC(007 x 075) f 1.798775 0.5020007401 2.7951075082 0.8024424918
RIX:CC(013 x 026) f 1.846758 0.4490031118 2.7379048866 0.9556111134
RIX:CC(013 x 041) f 0.8648275 0.3549681275 1.5693409729 0.1603140271
RIX:CC(015 x 018) f 3.7577666667 0.5796605248 4.9082323503 2.607300983
RIX:CC(015 x 059) f 1.2431 0.5796605248 2.3935656837 0.0926343163
RIX:CC(016 x 038) f 3.8823666667 0.5796605248 5.0328323503 2.731900983
RIX:CC(017 x 041) f 0.524055 0.7099362549 1.9330819458 -0.8849719458
RIX:CC(018 x 009) f 4.4942 0.7099362549 5.9032269458 3.0851730542
RIX:CC(018 x 065) f 1.4280666667 0.5796605248 2.5785323503 0.277600983
RIX:CC(019 x 002) f 2.7696216667 0.4098818879 3.5831237531 1.9561195802
RIX:CC(025 x 028) f 0.9452325 0.5020007401 1.9415650082 -0.0511000082
RIX:CC(026 x 034) f 0.845495 0.5020007401 1.8418275082 -0.1508375082
RIX:CC(028 x 030) f 2.29295 0.4490031118 3.1840968866 1.4018031134
RIX:CC(032 x 013) f 1.4027828571 0.3794768904 2.15593944 0.6496262743
RIX:CC(032 x 017) f 2.67645 0.7099362549 4.0854769458 1.2674230542
RIX:CC(034 x 016) f 2.4406333333 0.5796605248 3.591099017 1.2901676497
RIX:CC(035 x 071) f 1.8624666667 0.5796605248 3.0129323503 0.712000983
RIX:CC(037 x 046) f 0.25179 0.5796605248 1.4022556837 -0.8986756837
RIX:CC(037 x 057) f 3.5999333333 0.5796605248 4.750399017 2.4494676497
RIX:CC(038 x 013) f 0.73432 0.5796605248 1.8847856837 -0.4161456837
RIX:CC(041 x 016) f 0.5824666667 0.5796605248 1.7329323503 -0.567999017
RIX:CC(042 x 019) f 3.30795 0.7099362549 4.7169769458 1.8989230542
RIX:CC(042 x 025) f 0.42532 0.5796605248 1.5757856837 -0.7251456837
RIX:CC(043 x 037) f 1.9708844444 0.3346671601 2.6351061166 1.3066627723
RIX:CC(051 x 005) f 1.690075 0.5020007401 2.6864075082 0.6937424918
RIX:CC(051 x 009) f 1.9013 0.7099362549 3.3103269458 0.4922730542
RIX:CC(052 x 007) f 4.099 0.5796605248 5.2494656837 2.9485343163
RIX:CC(057 x 052) f 4.4601666667 0.5796605248 5.6106323503 3.309700983
RIX:CC(062 x 046) f 2.0852666667 0.5796605248 3.2357323503 0.934800983
RIX:CC(063 x 002) f 0.3943775 0.5020007401 1.3907100082 -0.6019550082
RIX:CC(074 x 058) f 4.5685 0.7099362549 5.9775269458 3.1594730542
RIX:CC(075 x 021) f 2.1462 0.3549681275 2.8507134729 1.4416865271
RIX:CC(075 x 035) f 1.471985 0.7099362549 2.8810119458 0.0629580542




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA