Project measure / variable:   Noll1   IgG1_d15

ID, description, units MPD:112609   IgG1_d15   immunoglobulin G1 (serum IgG1) area under curve (AUC) post-infection   [AUC]  day 15  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   34 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin G1 (serum IgG1) area under curve (AUC) post-infection day 15



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means2.6632   AUC
Median of the strain means2.9943   AUC
SD of the strain means± 1.6806
Coefficient of variation (CV)0.6311
Min–max range of strain means0.14145   –   5.5197   AUC
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 284.4581 9.1761 6.2343 < 0.0001
Residuals 68 100.0863 1.4719


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 3.2229 1.7873   4 0.89363 0.5545 0.8524, 4.6919 0.33
RIX:CC(003 x 051) f 0.50716 0.37984   2   0.26859 0.7489 0.23858, 0.77575 -1.28
RIX:CC(003 x 062) f 0.14145 0.08616   4 0.04308 0.6091 0.09262, 0.27027 -1.5
RIX:CC(013 x 041) f 0.27631 0.36342   6 0.14836 1.3153 0.03046, 0.96708 -1.42
RIX:CC(016 x 038) f 4.0173 1.241   3 0.71648 0.3089 2.5961, 4.8864 0.81
RIX:CC(017 x 041) f 1.6617 0.0   1   0.0 0.0 1.6617, 1.6617 -0.6
RIX:CC(018 x 009) f 3.3293 0.30151   3 0.17408 0.0906 3.0992, 3.6706 0.4
RIX:CC(018 x 065) f 2.5214 1.6747   4 0.83736 0.6642 0.49697, 4.4431 -0.08
RIX:CC(019 x 002) f 2.6763 1.0659   2   0.7537 0.3983 1.9226, 3.43 0.01
RIX:CC(021 x 032) f 1.2583 0.7633   3 0.44069 0.6066 0.65695, 2.117 -0.84
RIX:CC(025 x 028) f 0.33374 0.46451   4 0.23226 1.3918 0.01734, 1.0244 -1.39
RIX:CC(026 x 034) f 0.7175 0.36671   3 0.21172 0.5111 0.38414, 1.1103 -1.16
RIX:CC(026 x 042) f 4.1599 2.3527   4 1.1763 0.5656 1.4662, 6.3201 0.89
RIX:CC(028 x 030) f 0.8415 0.6726   4 0.3363 0.7993 0.12377, 1.7139 -1.08
RIX:CC(032 x 013) f 1.5148 0.68808   3 0.39726 0.4542 0.86883, 2.2384 -0.68
RIX:CC(032 x 017) f 4.6908 0.6968   3 0.4023 0.1485 3.9222, 5.2812 1.21
RIX:CC(034 x 016) f 1.3922 0.22469   3 0.12972 0.1614 1.1406, 1.5729 -0.76
RIX:CC(035 x 071) f 4.7617 1.759   2   1.2438 0.3694 3.5179, 6.0055 1.25
RIX:CC(037 x 046) f 0.74602 0.45882   3 0.2649 0.615 0.23729, 1.1285 -1.14
RIX:CC(037 x 057) f 3.9659 0.82718   3 0.47757 0.2086 3.0118, 4.4821 0.78
RIX:CC(038 x 013) f 0.79019 0.76281   3 0.44041 0.9653 0.3075, 1.6696 -1.11
RIX:CC(041 x 016) f 5.5197 1.1479   3 0.66272 0.208 4.1943, 6.1903 1.7
RIX:CC(042 x 017) f 3.4617 1.8275   4 0.91377 0.5279 1.7001, 5.5307 0.48
RIX:CC(042 x 019) f 4.0519 0.46309   3 0.26736 0.1143 3.574, 4.4986 0.83
RIX:CC(042 x 025) f 4.0606 1.7231   4 0.86153 0.4243 2.8127, 6.474 0.83
RIX:CC(043 x 037) f 4.5123 0.32989   3 0.19046 0.0731 4.1762, 4.8356 1.1
RIX:CC(051 x 005) f 0.93161 0.32148   3 0.18561 0.3451 0.67494, 1.2922 -1.03
RIX:CC(051 x 009) f 4.1808 1.2268   3 0.70827 0.2934 3.4498, 5.5971 0.9
RIX:CC(052 x 007) f 4.0008 2.4749   2   1.7501 0.6186 2.2507, 5.7508 0.8
RIX:CC(057 x 052) f 4.6227 2.4281   3 1.4019 0.5253 2.0208, 6.8282 1.17
RIX:CC(058 x 022) f 2.7656 1.775   2   1.2551 0.6418 1.5105, 4.0207 0.06
RIX:CC(071 x 058) f 3.5447 1.475   2   1.043 0.4161 2.5017, 4.5877 0.52
RIX:CC(075 x 021) f 4.6854 0.0   1   0.0 0.0 4.6854, 4.6854 1.2
RIX:CC(075 x 035) f 0.68546 0.2945   2   0.20824 0.4296 0.47722, 0.89371 -1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 3.2229 0.6066007137 4.4333528779 2.0124471221
RIX:CC(003 x 051) f 0.507165 0.8578629562 2.2190038766 -1.2046738766
RIX:CC(003 x 062) f 0.141445 0.6066007137 1.3518978779 -1.0690078779
RIX:CC(013 x 041) f 0.27631 0.4952874087 1.2646406362 -0.7120206362
RIX:CC(016 x 038) f 4.0173333333 0.7004421707 5.4150439232 2.6196227435
RIX:CC(018 x 009) f 3.3292666667 0.7004421707 4.7269772565 1.9315560768
RIX:CC(018 x 065) f 2.5214175 0.6066007137 3.7318703779 1.3109646221
RIX:CC(019 x 002) f 2.6763 0.8578629562 4.3881388766 0.9644611234
RIX:CC(021 x 032) f 1.2582833333 0.7004421707 2.6559939232 -0.1394272565
RIX:CC(025 x 028) f 0.33374 0.6066007137 1.5441928779 -0.8767128779
RIX:CC(026 x 034) f 0.7175033333 0.7004421707 2.1152139232 -0.6802072565
RIX:CC(026 x 042) f 4.159875 0.6066007137 5.3703278779 2.9494221221
RIX:CC(028 x 030) f 0.8415025 0.6066007137 2.0519553779 -0.3689503779
RIX:CC(032 x 013) f 1.5147766667 0.7004421707 2.9124872565 0.1170660768
RIX:CC(032 x 017) f 4.6908 0.7004421707 6.0885105898 3.2930894102
RIX:CC(034 x 016) f 1.3921666667 0.7004421707 2.7898772565 -0.0055439232
RIX:CC(035 x 071) f 4.7617 0.8578629562 6.4735388766 3.0498611234
RIX:CC(037 x 046) f 0.74602 0.7004421707 2.1437305898 -0.6516905898
RIX:CC(037 x 057) f 3.9658666667 0.7004421707 5.3635772565 2.5681560768
RIX:CC(038 x 013) f 0.7901866667 0.7004421707 2.1878972565 -0.6075239232
RIX:CC(041 x 016) f 5.5197 0.7004421707 6.9174105898 4.1219894102
RIX:CC(042 x 017) f 3.461675 0.6066007137 4.6721278779 2.2512221221
RIX:CC(042 x 019) f 4.0519 0.7004421707 5.4496105898 2.6541894102
RIX:CC(042 x 025) f 4.060575 0.6066007137 5.2710278779 2.8501221221
RIX:CC(043 x 037) f 4.5123 0.7004421707 5.9100105898 3.1145894102
RIX:CC(051 x 005) f 0.93161 0.7004421707 2.3293205898 -0.4661005898
RIX:CC(051 x 009) f 4.1808 0.7004421707 5.5785105898 2.7830894102
RIX:CC(052 x 007) f 4.00075 0.8578629562 5.7125888766 2.2889111234
RIX:CC(057 x 052) f 4.6226666667 0.7004421707 6.0203772565 3.2249560768
RIX:CC(058 x 022) f 2.7656 0.8578629562 4.4774388766 1.0537611234
RIX:CC(071 x 058) f 3.5447 0.8578629562 5.2565388766 1.8328611234
RIX:CC(075 x 035) f 0.685465 0.8578629562 2.3973038766 -1.0263738766




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA