Project measure / variable:   Noll1   IgG1_d7

ID, description, units MPD:112607   IgG1_d7   immunoglobulin G1 (serum IgG1) area under curve (AUC) post-infection   [AUC]  day 7  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   39 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin G1 (serum IgG1) area under curve (AUC) post-infection day 7



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested39 strains
Mean of the strain means0.13313   AUC
Median of the strain means0.05854   AUC
SD of the strain means± 0.18053
Coefficient of variation (CV)1.356
Min–max range of strain means0.00193136   –   0.68865   AUC
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 4.0693 0.1163 1.9546 0.0055
Residuals 96 5.7104 0.0595


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 0.50887 0.58857   4 0.29429 1.1566 0.0161, 1.2317 2.08
RIX:CC(003 x 051) f 0.00595424 0.0   1   0.0 0.0 0.00595424, 0.00595424 -0.7
RIX:CC(003 x 062) f 0.01485 0.01534   3 0.00885907 1.0331 0.00588561, 0.03257 -0.66
RIX:CC(005 x 038) f 0.08101 0.05008   6 0.02045 0.6182 0.03564, 0.15407 -0.29
RIX:CC(007 x 075) f 0.08929 0.00746705   2   0.00528 0.0836 0.08401, 0.09457 -0.24
RIX:CC(013 x 041) f 0.02138 0.01251   6 0.0051083 0.5853 0.01334, 0.04659 -0.62
RIX:CC(015 x 018) f 0.04735 0.01725   4 0.00862252 0.3642 0.03192, 0.07137 -0.48
RIX:CC(015 x 059) f 0.05536 0.02549   3 0.01472 0.4605 0.02968, 0.08066 -0.43
RIX:CC(016 x 038) f 0.12514 0.09889   3 0.05709 0.7902 0.06683, 0.23932 -0.04
RIX:CC(017 x 041) f 0.02577 0.00558387   3 0.00322385 0.2167 0.02144, 0.03207 -0.59
RIX:CC(018 x 009) f 0.61365 0.87463   3 0.50497 1.4253 0.03302, 1.6196 2.66
RIX:CC(018 x 065) f 0.00193136 0.0   1   0.0 0.0 0.00193136, 0.00193136 -0.73
RIX:CC(019 x 002) f 0.03882 0.05283   6 0.02157 1.3611 0.00816992, 0.14513 -0.52
RIX:CC(025 x 028) f 0.11982 0.13777   3 0.07954 1.1498 0.03921, 0.2789 -0.07
RIX:CC(026 x 034) f 0.05854 0.02067   2   0.01462 0.353 0.04393, 0.07316 -0.41
RIX:CC(028 x 030) f 0.0195 0.02079   3 0.012 1.066 0.00364705, 0.04304 -0.63
RIX:CC(032 x 013) f 0.0424 0.01186   4 0.00592863 0.2796 0.02574, 0.05375 -0.5
RIX:CC(032 x 017) f 0.47305 0.41348   5 0.18491 0.8741 0.04208, 1.0099 1.88
RIX:CC(035 x 020) f 0.04372 0.02223   4 0.01111 0.5084 0.02318, 0.07481 -0.5
RIX:CC(035 x 071) f 0.01574 0.00871268   2   0.0061608 0.5536 0.00957841, 0.0219 -0.65
RIX:CC(037 x 046) f 0.01583 0.0087645   3 0.00506019 0.5536 0.00895424, 0.0257 -0.65
RIX:CC(037 x 057) f 0.1996 0.26887   4 0.13443 1.347 0.03978, 0.60002 0.37
RIX:CC(038 x 013) f 0.07761 0.03962   3 0.02287 0.5105 0.04925, 0.12288 -0.31
RIX:CC(041 x 016) f 0.08456 0.03351   5 0.01499 0.3963 0.05053, 0.13989 -0.27
RIX:CC(042 x 017) f 0.55732 0.10282   3 0.05936 0.1845 0.4974, 0.67604 2.35
RIX:CC(042 x 019) f 0.04084 0.01627   3 0.0093924 0.3983 0.03013, 0.05956 -0.51
RIX:CC(042 x 025) f 0.13789 0.09282   4 0.04641 0.6731 0.0199, 0.24407 0.03
RIX:CC(043 x 037) f 0.09675 0.08988   9 0.02996 0.929 0.03995, 0.32759 -0.2
RIX:CC(051 x 005) f 0.23114 0.39618   4 0.19809 1.714 0.00538561, 0.82275 0.54
RIX:CC(051 x 009) f 0.68865 0.87067   3 0.50268 1.2643 0.11028, 1.69 3.08
RIX:CC(052 x 007) f 0.23655 0.13557   2   0.09586 0.5731 0.14068, 0.33241 0.57
RIX:CC(057 x 052) f 0.1107 0.06003   3 0.03466 0.5423 0.05808, 0.17608 -0.12
RIX:CC(058 x 022) f 0.02451 0.01349   5 0.0060313 0.5502 0.0106, 0.04304 -0.6
RIX:CC(059 x 065) f 0.03835 0.0   1   0.0 0.0 0.03835, 0.03835 -0.53
RIX:CC(062 x 046) f 0.07452 0.01499   3 0.00865493 0.2012 0.06085, 0.09055 -0.32
RIX:CC(063 x 002) f 0.01566 0.00172181   3 0.00099409 0.1099 0.01386, 0.01729 -0.65
RIX:CC(074 x 058) f 0.09871 0.08819   3 0.05092 0.8935 0.04493, 0.20049 -0.19
RIX:CC(074 x 062) f 0.04808 0.01339   3 0.00772985 0.2784 0.04009, 0.06354 -0.47
RIX:CC(075 x 035) f 0.01269 0.00175503   3 0.00101327 0.1383 0.01086, 0.01436 -0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 0.508875 0.1219459712 0.7509358398 0.2668141602
RIX:CC(003 x 062) f 0.0148523 0.1408110786 0.294360082 -0.264655482
RIX:CC(005 x 038) f 0.08101 0.0995684686 0.278651848 -0.116631848
RIX:CC(007 x 075) f 0.08929 0.1724576464 0.4316157225 -0.2530357225
RIX:CC(013 x 041) f 0.02138 0.0995684686 0.219021848 -0.176261848
RIX:CC(015 x 018) f 0.0473525 0.1219459712 0.2894133398 -0.1947083398
RIX:CC(015 x 059) f 0.05536 0.1408110786 0.334867782 -0.224147782
RIX:CC(016 x 038) f 0.1251433333 0.1408110786 0.4046511153 -0.1543644487
RIX:CC(017 x 041) f 0.0257666667 0.1408110786 0.3052744487 -0.2537411153
RIX:CC(018 x 009) f 0.61365 0.1408110786 0.893157782 0.334142218
RIX:CC(019 x 002) f 0.038816375 0.0995684686 0.236458223 -0.158825473
RIX:CC(025 x 028) f 0.1198233333 0.1408110786 0.3993311153 -0.1596844487
RIX:CC(026 x 034) f 0.058545 0.1724576464 0.4008707225 -0.2837807225
RIX:CC(028 x 030) f 0.01950235 0.1408110786 0.299010132 -0.260005432
RIX:CC(032 x 013) f 0.042405 0.1219459712 0.2844658398 -0.1996558398
RIX:CC(032 x 017) f 0.473048 0.1090717925 0.689553797 0.256542203
RIX:CC(035 x 020) f 0.04372 0.1219459712 0.2857808398 -0.1983408398
RIX:CC(035 x 071) f 0.015739205 0.1724576464 0.3580649275 -0.3265865175
RIX:CC(037 x 046) f 0.0158314133 0.1408110786 0.2953391953 -0.2636763687
RIX:CC(037 x 057) f 0.1996 0.1219459712 0.4416608398 -0.0424608398
RIX:CC(038 x 013) f 0.0776133333 0.1408110786 0.3571211153 -0.2018944487
RIX:CC(041 x 016) f 0.084564 0.1090717925 0.301069797 -0.131941797
RIX:CC(042 x 017) f 0.55732 0.1408110786 0.836827782 0.277812218
RIX:CC(042 x 019) f 0.04084 0.1408110786 0.320347782 -0.238667782
RIX:CC(042 x 025) f 0.1378925 0.1219459712 0.3799533398 -0.1041683398
RIX:CC(043 x 037) f 0.0967533333 0.0812973142 0.2581272265 -0.0646205598
RIX:CC(051 x 005) f 0.231142445 0.1219459712 0.4732032848 -0.0109183948
RIX:CC(051 x 009) f 0.6886533333 0.1408110786 0.9681611153 0.4091455513
RIX:CC(052 x 007) f 0.236545 0.1724576464 0.5788707225 -0.1057807225
RIX:CC(057 x 052) f 0.1106966667 0.1408110786 0.3902044487 -0.1688111153
RIX:CC(058 x 022) f 0.02451 0.1090717925 0.241015797 -0.191995797
RIX:CC(062 x 046) f 0.0745166667 0.1408110786 0.3540244487 -0.2049911153
RIX:CC(063 x 002) f 0.0156633333 0.1408110786 0.2951711153 -0.2638444487
RIX:CC(074 x 058) f 0.0987066667 0.1408110786 0.3782144487 -0.1808011153
RIX:CC(074 x 062) f 0.0480833333 0.1408110786 0.3275911153 -0.2314244487
RIX:CC(075 x 035) f 0.0126866667 0.1408110786 0.2921944487 -0.2668211153




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA