Project measure / variable:   Noll1   IgM_d15

ID, description, units MPD:112604   IgM_d15   immunoglobulin M (serum IgM) area under curve (AUC) post-infection   [AUC]  day 15  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   35 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin M (serum IgM) area under curve (AUC) post-infection day 15



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means0.58248   AUC
Median of the strain means0.35962   AUC
SD of the strain means± 0.58435
Coefficient of variation (CV)1.0032
Min–max range of strain means0.11037   –   2.8883   AUC
Mean sample size per strain2.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 26.4557 0.8819 9.6775 < 0.0001
Residuals 66 6.0142 0.0911


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 0.67903 0.50346   5 0.22515 0.7414 0.10924, 1.4953 0.17
RIX:CC(003 x 051) f 0.35962 0.2957   2   0.2091 0.8223 0.15052, 0.56871 -0.38
RIX:CC(003 x 062) f 0.34722 0.17933   4 0.08966 0.5165 0.21621, 0.6076 -0.4
RIX:CC(013 x 041) f 0.13345 0.12571   6 0.05132 0.942 0.03216, 0.35758 -0.77
RIX:CC(015 x 059) f 0.30261 0.0   1   0.0 0.0 0.30261, 0.30261 -0.48
RIX:CC(016 x 038) f 0.33981 0.1734   3 0.10011 0.5103 0.1512, 0.4923 -0.42
RIX:CC(017 x 041) f 0.28864 0.0   1   0.0 0.0 0.28864, 0.28864 -0.5
RIX:CC(018 x 009) f 0.70844 0.31711   3 0.18308 0.4476 0.52442, 1.0746 0.22
RIX:CC(018 x 065) f 0.55841 0.19602   4 0.09801 0.351 0.28498, 0.71921 -0.04
RIX:CC(019 x 002) f 1.1268 0.50237   2   0.35523 0.4459 0.77154, 1.482 0.93
RIX:CC(021 x 032) f 0.35475 0.14944   3 0.08628 0.4213 0.21844, 0.51454 -0.39
RIX:CC(025 x 028) f 0.23834 0.16765   4 0.08383 0.7034 0.01425, 0.41108 -0.59
RIX:CC(026 x 034) f 0.27227 0.12317   3 0.07111 0.4524 0.15587, 0.40125 -0.53
RIX:CC(026 x 042) f 0.72204 0.31454   4 0.15727 0.4356 0.3143, 1.0517 0.24
RIX:CC(028 x 030) f 0.25244 0.05401   4 0.02701 0.214 0.20507, 0.30867 -0.56
RIX:CC(032 x 013) f 0.11037 0.02456   3 0.01418 0.2225 0.08208, 0.12621 -0.81
RIX:CC(032 x 017) f 1.9632 1.0144   3 0.58565 0.5167 1.2942, 3.1303 2.36
RIX:CC(034 x 016) f 0.39356 0.05253   3 0.03033 0.1335 0.35183, 0.45255 -0.32
RIX:CC(035 x 071) f 0.1735 0.0   1   0.0 0.0 0.1735, 0.1735 -0.7
RIX:CC(037 x 046) f 0.14832 0.01872   3 0.01081 0.1262 0.13726, 0.16994 -0.74
RIX:CC(037 x 057) f 0.37819 0.38071   3 0.2198 1.0067 0.14665, 0.81759 -0.35
RIX:CC(038 x 013) f 0.12767 0.02289   3 0.01321 0.1793 0.10709, 0.15232 -0.78
RIX:CC(041 x 016) f 0.12064 0.03812   3 0.02201 0.316 0.08525, 0.161 -0.79
RIX:CC(042 x 017) f 0.4282 0.23082   4 0.11541 0.539 0.15575, 0.70132 -0.26
RIX:CC(042 x 019) f 2.8883 0.17819   2   0.126 0.0617 2.7623, 3.0143 3.95
RIX:CC(042 x 025) f 0.1928 0.04578   4 0.02289 0.2374 0.15687, 0.25989 -0.67
RIX:CC(043 x 037) f 0.65843 0.23697   3 0.13682 0.3599 0.50358, 0.93123 0.13
RIX:CC(051 x 005) f 0.42802 0.48607   2   0.3437 1.1356 0.08432, 0.77172 -0.26
RIX:CC(051 x 009) f 1.0907 0.37754   3 0.21797 0.3461 0.81732, 1.5215 0.87
RIX:CC(052 x 007) f 0.87829 0.37775   2   0.26711 0.4301 0.61118, 1.1454 0.51
RIX:CC(057 x 052) f 0.14589 0.02668   3 0.0154 0.1829 0.12435, 0.17573 -0.75
RIX:CC(058 x 022) f 1.2973 0.45347   2   0.32066 0.3495 0.97669, 1.618 1.22
RIX:CC(071 x 058) f 0.81114 0.32097   2   0.22696 0.3957 0.58418, 1.0381 0.39
RIX:CC(075 x 021) f 1.3309 0.0   1   0.0 0.0 1.3309, 1.3309 1.28
RIX:CC(075 x 035) f 0.13752 0.014   2   0.0099 0.1018 0.12762, 0.14742 -0.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 0.679032 0.1349998022 0.9485678017 0.4094961983
RIX:CC(003 x 051) f 0.359615 0.2134534293 0.7857885221 -0.0665585221
RIX:CC(003 x 062) f 0.34722 0.1509343673 0.6485701874 0.0458698126
RIX:CC(013 x 041) f 0.1334516667 0.1232373949 0.3795030644 -0.112599731
RIX:CC(016 x 038) f 0.3398133333 0.1742839952 0.687782557 -0.0081558903
RIX:CC(018 x 009) f 0.7084366667 0.1742839952 1.0564058903 0.360467443
RIX:CC(018 x 065) f 0.558405 0.1509343673 0.8597551874 0.2570548126
RIX:CC(019 x 002) f 1.12677 0.2134534293 1.5529435221 0.7005964779
RIX:CC(021 x 032) f 0.35475 0.1742839952 0.7027192237 0.0067807763
RIX:CC(025 x 028) f 0.2383375 0.1509343673 0.5396876874 -0.0630126874
RIX:CC(026 x 034) f 0.2722733333 0.1742839952 0.620242557 -0.0756958903
RIX:CC(026 x 042) f 0.72204 0.1509343673 1.0233901874 0.4206898126
RIX:CC(028 x 030) f 0.252435 0.1509343673 0.5537851874 -0.0489151874
RIX:CC(032 x 013) f 0.1103666667 0.1742839952 0.4583358903 -0.237602557
RIX:CC(032 x 017) f 1.9631666667 0.1742839952 2.3111358903 1.615197443
RIX:CC(034 x 016) f 0.39356 0.1742839952 0.7415292237 0.0455907763
RIX:CC(037 x 046) f 0.1483233333 0.1742839952 0.496292557 -0.1996458903
RIX:CC(037 x 057) f 0.3781933333 0.1742839952 0.726162557 0.0302241097
RIX:CC(038 x 013) f 0.1276666667 0.1742839952 0.4756358903 -0.220302557
RIX:CC(041 x 016) f 0.1206366667 0.1742839952 0.4686058903 -0.227332557
RIX:CC(042 x 017) f 0.4281975 0.1509343673 0.7295476874 0.1268473126
RIX:CC(042 x 019) f 2.8883 0.2134534293 3.3144735221 2.4621264779
RIX:CC(042 x 025) f 0.192795 0.1509343673 0.4941451874 -0.1085551874
RIX:CC(043 x 037) f 0.6584266667 0.1742839952 1.0063958903 0.310457443
RIX:CC(051 x 005) f 0.42802 0.2134534293 0.8541935221 0.0018464779
RIX:CC(051 x 009) f 1.0907433333 0.1742839952 1.438712557 0.7427741097
RIX:CC(052 x 007) f 0.87829 0.2134534293 1.3044635221 0.4521164779
RIX:CC(057 x 052) f 0.14589 0.1742839952 0.4938592237 -0.2020792237
RIX:CC(058 x 022) f 1.297345 0.2134534293 1.7235185221 0.8711714779
RIX:CC(071 x 058) f 0.81114 0.2134534293 1.2373135221 0.3849664779
RIX:CC(075 x 035) f 0.13752 0.2134534293 0.5636935221 -0.2886535221




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA