Project measure / variable:   Noll1   IgM_d7

ID, description, units MPD:112602   IgM_d7   immunoglobulin M (serum IgM) area under curve (AUC) post-infection   [AUC]  day 7  
influenza A (H1N1) virus study
Data set, strains Noll1   CC RIX   39 strains     sex: f     age: 8-12 wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Noll1 - immunoglobulin M (serum IgM) area under curve (AUC) post-infection day 7



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested39 strains
Mean of the strain means0.53551   AUC
Median of the strain means0.36807   AUC
SD of the strain means± 0.51362
Coefficient of variation (CV)0.9591
Min–max range of strain means0.0289   –   1.8207   AUC
Mean sample size per strain3.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 36 37.3375 1.0372 3.76 < 0.0001
Residuals 97 26.7566 0.2758


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(002 x 021) f 0.36997 0.46724   4 0.23362 1.2629 0.02189, 1.0556 -0.32
RIX:CC(003 x 051) f 0.2371 0.0   1   0.0 0.0 0.2371, 0.2371 -0.58
RIX:CC(003 x 062) f 0.85033 0.51154   3 0.29534 0.6016 0.55376, 1.441 0.61
RIX:CC(005 x 038) f 0.17875 0.23075   6 0.0942 1.2909 0.00984962, 0.55943 -0.69
RIX:CC(007 x 075) f 0.15276 0.03835   2   0.02712 0.2511 0.12564, 0.17988 -0.75
RIX:CC(013 x 041) f 0.13828 0.0663   6 0.02707 0.4795 0.0792, 0.25735 -0.77
RIX:CC(015 x 018) f 0.59296 0.33951   4 0.16976 0.5726 0.18234, 0.97867 0.11
RIX:CC(015 x 059) f 0.29329 0.0516   3 0.02979 0.1759 0.23796, 0.3401 -0.47
RIX:CC(016 x 038) f 1.7132 1.1609   3 0.67024 0.6776 0.57119, 2.8921 2.29
RIX:CC(017 x 041) f 0.20005 0.01525   2   0.01079 0.0762 0.18927, 0.21084 -0.65
RIX:CC(018 x 009) f 0.37339 0.46475   3 0.26832 1.2447 0.04188, 0.90462 -0.32
RIX:CC(018 x 065) f 0.08122 0.02426   3 0.014 0.2987 0.05324, 0.09633 -0.88
RIX:CC(019 x 002) f 0.16424 0.03971   6 0.01621 0.2418 0.10957, 0.22275 -0.72
RIX:CC(025 x 028) f 0.63877 0.36437   3 0.21037 0.5704 0.22429, 0.90865 0.2
RIX:CC(026 x 034) f 0.27888 0.02932   2   0.02073 0.1051 0.25815, 0.29962 -0.5
RIX:CC(028 x 030) f 0.19611 0.04891   3 0.02824 0.2494 0.14189, 0.23691 -0.66
RIX:CC(032 x 013) f 1.5893 0.48317   4 0.24159 0.304 1.0367, 2.2112 2.05
RIX:CC(032 x 017) f 0.49108 0.24645   5 0.11022 0.5019 0.16724, 0.69419 -0.09
RIX:CC(035 x 020) f 0.28497 0.09164   4 0.04582 0.3216 0.15161, 0.36062 -0.49
RIX:CC(035 x 071) f 1.8207 0.96492   2   0.6823 0.53 1.1384, 2.503 2.5
RIX:CC(037 x 046) f 0.05068 0.02032   3 0.01173 0.4009 0.03345, 0.07309 -0.94
RIX:CC(037 x 057) f 0.69301 0.23444   4 0.11722 0.3383 0.41687, 0.94732 0.31
RIX:CC(038 x 013) f 0.56212 0.52122   3 0.30093 0.9272 0.12016, 1.1369 0.05
RIX:CC(041 x 016) f 0.4714 0.1353   5 0.06051 0.287 0.35294, 0.68789 -0.12
RIX:CC(042 x 017) f 0.11284 0.07579   3 0.04376 0.6717 0.04878, 0.19651 -0.82
RIX:CC(042 x 019) f 1.4113 0.30365   3 0.17531 0.2152 1.15, 1.7444 1.71
RIX:CC(042 x 025) f 0.46196 0.32748   4 0.16374 0.7089 0.225, 0.93928 -0.14
RIX:CC(043 x 037) f 1.5752 0.5876   9 0.19587 0.373 0.90523, 2.5306 2.02
RIX:CC(051 x 005) f 0.36807 0.48543   4 0.24271 1.3188 0.02608, 1.0866 -0.33
RIX:CC(051 x 009) f 1.3116 0.19822   3 0.11444 0.1511 1.1782, 1.5394 1.51
RIX:CC(052 x 007) f 0.20125 0.004278   2   0.003025 0.0213 0.19823, 0.20428 -0.65
RIX:CC(057 x 052) f 0.64146 0.20399   3 0.11777 0.318 0.42213, 0.82551 0.21
RIX:CC(058 x 022) f 1.2623 1.8836   5 0.84239 1.4923 0.17207, 4.6127 1.42
RIX:CC(059 x 065) f 0.30031 0.0   1   0.0 0.0 0.30031, 0.30031 -0.46
RIX:CC(062 x 046) f 0.18744 0.05284   3 0.03051 0.2819 0.13827, 0.24331 -0.68
RIX:CC(063 x 002) f 0.0289 0.00309724   3 0.00178819 0.1072 0.02533, 0.03087 -0.99
RIX:CC(074 x 058) f 0.10577 0.00520833   3 0.00300703 0.0492 0.10074, 0.11114 -0.84
RIX:CC(074 x 062) f 0.42646 0.50042   3 0.28892 1.1734 0.08734, 1.0012 -0.21
RIX:CC(075 x 035) f 0.06761 0.01698   3 0.00980354 0.2512 0.05589, 0.08708 -0.91


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(002 x 021) f 0.36997 0.2626031268 0.8911645145 -0.1512245145
RIX:CC(003 x 062) f 0.8503266667 0.3032279719 1.4521502532 0.2485030801
RIX:CC(005 x 038) f 0.17874827 0.2144145552 0.6043018091 -0.2468052691
RIX:CC(007 x 075) f 0.15276 0.3713769035 0.8898403511 -0.5843203511
RIX:CC(013 x 041) f 0.1382783333 0.2144145552 0.5638318724 -0.2872752058
RIX:CC(015 x 018) f 0.592955 0.2626031268 1.1141495145 0.0717604855
RIX:CC(015 x 059) f 0.2932933333 0.3032279719 0.8951169199 -0.3085302532
RIX:CC(016 x 038) f 1.7131966667 0.3032279719 2.3150202532 1.1113730801
RIX:CC(017 x 041) f 0.200055 0.3713769035 0.9371353511 -0.5370253511
RIX:CC(018 x 009) f 0.3733933333 0.3032279719 0.9752169199 -0.2284302532
RIX:CC(018 x 065) f 0.08122 0.3032279719 0.6830435865 -0.5206035865
RIX:CC(019 x 002) f 0.1642433333 0.2144145552 0.5897968724 -0.2613102058
RIX:CC(025 x 028) f 0.63877 0.3032279719 1.2405935865 0.0369464135
RIX:CC(026 x 034) f 0.278885 0.3713769035 1.0159653511 -0.4581953511
RIX:CC(028 x 030) f 0.1961066667 0.3032279719 0.7979302532 -0.4057169199
RIX:CC(032 x 013) f 1.58925 0.2626031268 2.1104445145 1.0680554855
RIX:CC(032 x 017) f 0.491076 0.2348793771 0.9572465456 0.0249054544
RIX:CC(035 x 020) f 0.284965 0.2626031268 0.8061595145 -0.2362295145
RIX:CC(035 x 071) f 1.8207 0.3713769035 2.5577803511 1.0836196489
RIX:CC(037 x 046) f 0.0506833333 0.3032279719 0.6525069199 -0.5511402532
RIX:CC(037 x 057) f 0.6930125 0.2626031268 1.2142070145 0.1718179855
RIX:CC(038 x 013) f 0.56212 0.3032279719 1.1639435865 -0.0397035865
RIX:CC(041 x 016) f 0.471398 0.2348793771 0.9375685456 0.0052274544
RIX:CC(042 x 017) f 0.1128366667 0.3032279719 0.7146602532 -0.4889869199
RIX:CC(042 x 019) f 1.4112666667 0.3032279719 2.0130902532 0.8094430801
RIX:CC(042 x 025) f 0.461955 0.2626031268 0.9831495145 -0.0592395145
RIX:CC(043 x 037) f 1.5752033333 0.1750687512 1.922666343 1.2277403236
RIX:CC(051 x 005) f 0.368075 0.2626031268 0.8892695145 -0.1531195145
RIX:CC(051 x 009) f 1.3116333333 0.3032279719 1.9134569199 0.7098097468
RIX:CC(052 x 007) f 0.201255 0.3713769035 0.9383353511 -0.5358253511
RIX:CC(057 x 052) f 0.6414633333 0.3032279719 1.2432869199 0.0396397468
RIX:CC(058 x 022) f 1.26227 0.2348793771 1.7284405456 0.7960994544
RIX:CC(062 x 046) f 0.1874433333 0.3032279719 0.7892669199 -0.4143802532
RIX:CC(063 x 002) f 0.0289 0.3032279719 0.6307235865 -0.5729235865
RIX:CC(074 x 058) f 0.10577 0.3032279719 0.7075935865 -0.4960535865
RIX:CC(074 x 062) f 0.4264633333 0.3032279719 1.0282869199 -0.1753602532
RIX:CC(075 x 035) f 0.0676066667 0.3032279719 0.6694302532 -0.5342169199




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA