Project measure / variable:   Zimmermann1   vco2_light

ID, description, units MPD:112182   vco2_light   volume of carbon dioxide produced, second day   [mL/h]  during light  
Data set, strains Zimmermann1   inbred   30 strains     sex: both     age: 7-15wks
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  STRAIN COMPARISON PLOT
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Zimmermann1 - volume of carbon dioxide produced, second day during light



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means64.4   mL/h 67.12   mL/h
Median of the strain means63.05   mL/h 63.92   mL/h
SD of the strain means± 12.969 ± 13.096
Coefficient of variation (CV)0.2014 0.1951
Min–max range of strain means41.427   –   87.73   mL/h 40.829   –   90.73   mL/h
Mean sample size per strain11.2   mice 11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1110.7316 1110.7316 10.6563 0.0012
strain 29 109539.4059 3777.2209 36.2385 < 0.0001
sex:strain 29 1628.2628 56.147 0.5387 0.9781
Residuals 611 63685.9886 104.2324


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 64.64 11.883   12 3.4304 0.1838 44.625, 86.04 0.02
129S1/SvImJ m 64.34 6.8695   10 2.1723 0.1068 56.3, 77.76 -0.21
129X1/SvJ f 55.0 6.74   6 2.7516 0.1225 48.905, 64.45 -0.72
129X1/SvJ m 58.82 7.678   8 2.7146 0.1305 46.016, 69.81 -0.63
A/J f 41.427 6.4049   12 1.8489 0.1546 31.562, 55.21 -1.77
A/J m 40.829 6.5357   12 1.8867 0.1601 32.267, 56.36 -2.01
AKR/J f 65.71 6.8528   12 1.9782 0.1043 54.75, 76.12 0.1
AKR/J m 66.9 7.0576   11 2.128 0.1055 52.93, 76.54 -0.02
BALB/cJ f 71.48 8.3933   11 2.5307 0.1174 52.56, 80.41 0.55
BALB/cJ m 71.53 10.515   11 3.1704 0.147 55.25, 85.93 0.34
BTBR T+ Itpr3tf/J f 83.33 16.008   12 4.621 0.1921 54.17, 104.0 1.46
BTBR T+ Itpr3tf/J m 82.07 18.046   12 5.2093 0.2199 58.4, 111.9 1.14
BUB/BnJ f 78.68 5.7043   11 1.7199 0.0725 67.89, 86.49 1.1
BUB/BnJ m 78.87 7.3355   11 2.2117 0.093 66.74, 89.47 0.9
C3H/HeJ f 46.555 7.2777   12 2.1009 0.1563 37.478, 62.91 -1.38
C3H/HeJ m 51.71 9.6276   12 2.7793 0.1862 32.444, 63.07 -1.18
C3H/HeOuJ f 69.14 10.749   12 3.1029 0.1555 47.803, 84.62 0.37
C3H/HeOuJ m 69.29 9.8089   12 2.8316 0.1416 56.15, 84.23 0.17
C57BL/6J f 62.04 7.5309   12 2.174 0.1214 51.42, 77.48 -0.18
C57BL/6J m 63.49 7.1629   12 2.0677 0.1128 46.349, 72.64 -0.28
C57BL/6NCrl f 63.31 9.3161   12 2.6893 0.1471 49.305, 75.02 -0.08
C57BL/6NCrl m 67.06 6.6782   12 1.9278 0.0996 57.34, 79.41 0.0
C57BL/6NJ f 62.8 8.9257   12 2.5766 0.1421 49.27, 77.37 -0.12
C57BL/6NJ m 61.73 12.976   12 3.7459 0.2102 40.381, 77.46 -0.41
CBA/J f 56.4 7.8084   12 2.2541 0.1385 47.958, 73.08 -0.62
CBA/J m 61.29 9.9888   12 2.8835 0.163 46.293, 76.74 -0.45
DBA/1J f 45.581 10.111   11 3.0485 0.2218 30.193, 61.42 -1.45
DBA/1J m 52.12 9.3085   12 2.6871 0.1786 35.643, 65.49 -1.15
DBA/2J f 55.27 7.6487   12 2.208 0.1384 42.051, 66.15 -0.7
DBA/2J m 58.42 5.7049   11 1.7201 0.0977 47.903, 66.67 -0.66
FVB/NJ f 80.18 9.9448   12 2.8708 0.124 60.46, 98.73 1.22
FVB/NJ m 82.18 7.6957   12 2.2216 0.0936 66.06, 96.14 1.15
KK/HlJ f 80.64 11.71   12 3.3804 0.1452 55.78, 101.6 1.25
KK/HlJ m 81.63 10.498   12 3.0304 0.1286 68.44, 99.98 1.11
LG/J f 80.27 16.09   12 4.6447 0.2004 49.474, 98.8 1.22
LG/J m 86.42 20.335   12 5.8703 0.2353 46.889, 117.7 1.47
LP/J f 49.57 6.4668   10 2.045 0.1305 39.732, 58.92 -1.14
LP/J m 51.76 9.9353   11 2.9956 0.1919 31.318, 64.63 -1.17
MA/MyJ f 57.44 10.178   10 3.2186 0.1772 42.415, 74.06 -0.54
MA/MyJ m 60.25 5.8015   9 1.9338 0.0963 52.47, 69.29 -0.52
MRL/MpJ f 81.04 9.4458   12 2.7268 0.1166 65.85, 96.36 1.28
MRL/MpJ m 84.29 8.2016   12 2.3676 0.0973 69.45, 97.58 1.31
NOD/ShiLtJ f 62.1 13.343   12 3.8517 0.2148 45.606, 89.49 -0.18
NOD/ShiLtJ m 58.17 8.9377   12 2.5801 0.1536 46.939, 73.67 -0.68
NON/ShiLtJ f 69.15 11.2   10 3.5416 0.162 47.288, 85.21 0.37
NON/ShiLtJ m 80.12 7.6369   12 2.2046 0.0953 72.3, 95.63 0.99
NZB/BlNJ f 55.55 8.6698   12 2.5028 0.1561 42.248, 67.75 -0.68
NZB/BlNJ m 62.72 11.54   12 3.3314 0.184 43.98, 83.03 -0.34
NZO/HlLtJ f 87.73 10.629   12 3.0685 0.1212 65.19, 102.7 1.8
NZO/HlLtJ m 90.73 10.354   10 3.2743 0.1141 73.63, 107.4 1.8
NZW/LacJ f 79.78 7.6159   12 2.1985 0.0955 66.14, 92.7 1.19
NZW/LacJ m 87.67 8.9975   11 2.7129 0.1026 68.12, 98.49 1.57
RIIIS/J f 49.499 9.9922   11 3.0128 0.2019 35.389, 68.69 -1.15
RIIIS/J m 51.77 7.505   9 2.5017 0.145 41.746, 63.07 -1.17
SJL/J f 71.79 13.344   11 4.0235 0.1859 42.435, 87.36 0.57
SJL/J m 75.22 11.705   12 3.379 0.1556 59.28, 92.07 0.62
SM/J f 47.511 6.3855   9 2.1285 0.1344 36.604, 58.33 -1.3
SM/J m 52.41 13.457   9 4.4855 0.2567 31.458, 72.22 -1.12
SWR/J f 58.34 13.059   9 4.3531 0.2239 44.865, 77.35 -0.47
SWR/J m 59.92 13.593   9 4.5311 0.2268 39.327, 84.65 -0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 64.63625 2.947207537 70.4241357836 58.8483642164
129S1/SvImJ m 64.337 3.2285040993 70.6773112079 57.9966887921
129X1/SvJ f 55.0013333333 4.1679808699 63.1866399059 46.8160267607
129X1/SvJ m 58.817 3.6095773158 65.9056834296 51.7283165704
A/J f 41.4274166667 2.947207537 47.2153024503 35.6395308831
A/J m 40.8288333333 2.947207537 46.6167191169 35.0409475497
AKR/J f 65.71 2.947207537 71.4978857836 59.9221142164
AKR/J m 66.9045454545 3.0782578779 72.9497949954 60.8592959137
BALB/cJ f 71.4754545455 3.0782578779 77.5207040863 65.4302050046
BALB/cJ m 71.5318181818 3.0782578779 77.5770677227 65.4865686409
BTBR T+ Itpr3tf/J f 83.335 2.947207537 89.1228857836 77.5471142164
BTBR T+ Itpr3tf/J m 82.07 2.947207537 87.8578857836 76.2821142164
BUB/BnJ f 78.6809090909 3.0782578779 84.7261586318 72.63565955
BUB/BnJ m 78.8736363636 3.0782578779 84.9188859045 72.8283868228
C3H/HeJ f 46.55475 2.947207537 52.3426357836 40.7668642164
C3H/HeJ m 51.7149166667 2.947207537 57.5028024503 45.9270308831
C3H/HeOuJ f 69.1410833333 2.947207537 74.9289691169 63.3531975497
C3H/HeOuJ m 69.2941666667 2.947207537 75.0820524503 63.5062808831
C57BL/6J f 62.0358333333 2.947207537 67.8237191169 56.2479475497
C57BL/6J m 63.4924166667 2.947207537 69.2803024503 57.7045308831
C57BL/6NCrl f 63.3146666667 2.947207537 69.1025524503 57.5267808831
C57BL/6NCrl m 67.0641666667 2.947207537 72.8520524503 61.2762808831
C57BL/6NJ f 62.802 2.947207537 68.5898857836 57.0141142164
C57BL/6NJ m 61.7263333333 2.947207537 67.5142191169 55.9384475497
CBA/J f 56.3959166667 2.947207537 62.1838024503 50.6080308831
CBA/J m 61.2853333333 2.947207537 67.0732191169 55.4974475497
DBA/1J f 45.5809090909 3.0782578779 51.6261586318 39.53565955
DBA/1J m 52.1245 2.947207537 57.9123857836 46.3366142164
DBA/2J f 55.2701666667 2.947207537 61.0580524503 49.4822808831
DBA/2J m 58.4220909091 3.0782578779 64.46734045 52.3768413682
FVB/NJ f 80.1775 2.947207537 85.9653857836 74.3896142164
FVB/NJ m 82.1758333333 2.947207537 87.9637191169 76.3879475497
KK/HlJ f 80.6358333333 2.947207537 86.4237191169 74.8479475497
KK/HlJ m 81.6275 2.947207537 87.4153857836 75.8396142164
LG/J f 80.2686666667 2.947207537 86.0565524503 74.4807808831
LG/J m 86.41575 2.947207537 92.2036357836 80.6278642164
LP/J f 49.5704 3.2285040993 55.9107112079 43.2300887921
LP/J m 51.7643636364 3.0782578779 57.8096131772 45.7191140955
MA/MyJ f 57.4425 3.2285040993 63.7828112079 51.1021887921
MA/MyJ m 60.2455555556 3.4031421297 66.9288303859 53.5622807252
MRL/MpJ f 81.0433333333 2.947207537 86.8312191169 75.2554475497
MRL/MpJ m 84.29 2.947207537 90.0778857836 78.5021142164
NOD/ShiLtJ f 62.1028333333 2.947207537 67.8907191169 56.3149475497
NOD/ShiLtJ m 58.17475 2.947207537 63.9626357836 52.3868642164
NON/ShiLtJ f 69.1478 3.2285040993 75.4881112079 62.8074887921
NON/ShiLtJ m 80.1183333333 2.947207537 85.9062191169 74.3304475497
NZB/BlNJ f 55.5504166667 2.947207537 61.3383024503 49.7625308831
NZB/BlNJ m 62.7225 2.947207537 68.5103857836 56.9346142164
NZO/HlLtJ f 87.7291666667 2.947207537 93.5170524503 81.9412808831
NZO/HlLtJ m 90.728 3.2285040993 97.0683112079 84.3876887921
NZW/LacJ f 79.7775 2.947207537 85.5653857836 73.9896142164
NZW/LacJ m 87.6663636364 3.0782578779 93.7116131772 81.6211140955
RIIIS/J f 49.4989090909 3.0782578779 55.5441586318 43.45365955
RIIIS/J m 51.7693333333 3.4031421297 58.4526081637 45.0860585029
SJL/J f 71.7931818182 3.0782578779 77.8384313591 65.7479322773
SJL/J m 75.2183333333 2.947207537 81.0062191169 69.4304475497
SM/J f 47.5105555556 3.4031421297 54.1938303859 40.8272807252
SM/J m 52.4118888889 3.4031421297 59.0951637193 45.7286140585
SWR/J f 58.3362222222 3.4031421297 65.0194970526 51.6529473918
SWR/J m 59.9241111111 3.4031421297 66.6073859415 53.2408362807


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 64.486625 2.1857076077 68.7790359792 60.1942140208
129X1/SvJ both 56.9091666667 2.7568602128 62.3232380657 51.4950952677
A/J both 41.128125 2.083990435 45.2207782863 37.0354717137
AKR/J both 66.3072727273 2.1308275287 70.4919072351 62.1226382195
BALB/cJ both 71.5036363636 2.1766570197 75.778273308 67.2289994193
BTBR T+ Itpr3tf/J both 82.7025 2.083990435 86.7951532863 78.6098467137
BUB/BnJ both 78.7772727273 2.1766570197 83.0519096716 74.502635783
C3H/HeJ both 49.1348333333 2.083990435 53.2274866196 45.042180047
C3H/HeOuJ both 69.217625 2.083990435 73.3102782863 65.1249717137
C57BL/6J both 62.764125 2.083990435 66.8567782863 58.6714717137
C57BL/6NCrl both 65.1894166667 2.083990435 69.282069953 61.0967633804
C57BL/6NJ both 62.2641666667 2.083990435 66.356819953 58.1715133804
CBA/J both 58.840625 2.083990435 62.9332782863 54.7479717137
DBA/1J both 48.8527045455 2.1308275287 53.0373390532 44.6680700377
DBA/2J both 56.8461287879 2.1308275287 61.0307632957 52.6614942801
FVB/NJ both 81.1766666667 2.083990435 85.269319953 77.0840133804
KK/HlJ both 81.1316666667 2.083990435 85.224319953 77.0390133804
LG/J both 83.3422083333 2.083990435 87.4348616196 79.249555047
LP/J both 50.6673818182 2.2304097315 55.0475812493 46.2871823871
MA/MyJ both 58.8440277778 2.3454538513 63.4501570821 54.2378984735
MRL/MpJ both 82.6666666667 2.083990435 86.759319953 78.5740133804
NOD/ShiLtJ both 60.1387916667 2.083990435 64.231444953 56.0461383804
NON/ShiLtJ both 74.6330666667 2.1857076077 78.9254776458 70.3406556875
NZB/BlNJ both 59.1364583333 2.083990435 63.2291116196 55.043805047
NZO/HlLtJ both 89.2285833333 2.1857076077 93.5209943125 84.9361723542
NZW/LacJ both 83.7219318182 2.1308275287 87.906566326 79.5372973104
RIIIS/J both 50.6341212121 2.2943979558 55.1399841836 46.1282582407
SJL/J both 73.5057575758 2.1308275287 77.6903920836 69.321123068
SM/J both 49.9612222222 2.4063848772 54.6870111753 45.2354332691
SWR/J both 59.1301666667 2.4063848772 63.8559556198 54.4043777136




  GWAS USING LINEAR MIXED MODELS