Project measure / variable:   Zimmermann1   rearing_act_dark

ID, description, units MPD:112177   rearing_act_dark   rearing movement, number of z-axis beam breaks, second day (beam breaks/min)   [n/min]  during dark  
Data set, strains Zimmermann1   inbred   30 strains     sex: both     age: 7-15wks
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  STRAIN COMPARISON PLOT
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Zimmermann1 - rearing movement, number of z-axis beam breaks, second day (beam breaks/min) during dark



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means9.2945   n/min 7.5685   n/min
Median of the strain means9.0603   n/min 7.152   n/min
SD of the strain means± 3.2496 ± 3.1082
Coefficient of variation (CV)0.3496 0.4107
Min–max range of strain means2.9802   –   14.699   n/min 2.9383   –   14.655   n/min
Mean sample size per strain11.2   mice 11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 475.4909 475.4909 24.1622 < 0.0001
strain 29 5565.999 191.931 9.753 < 0.0001
sex:strain 29 932.363 32.1504 1.6337 0.0203
Residuals 611 12023.9222 19.6791


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.9802 0.60425   12 0.17443 0.2028 1.4778, 3.7111 -1.94
129S1/SvImJ m 2.9383 0.84849   10 0.26831 0.2888 0.95694, 3.8347 -1.49
129X1/SvJ f 4.8613 1.0276   6 0.41952 0.2114 3.7819, 6.6472 -1.36
129X1/SvJ m 3.1368 2.2538   8 0.79684 0.7185 0.83194, 6.9611 -1.43
A/J f 8.5156 2.845   12 0.82127 0.3341 4.3986, 14.368 -0.24
A/J m 9.8023 2.577   12 0.74391 0.2629 6.4542, 15.875 0.72
AKR/J f 9.9626 3.3026   12 0.95338 0.3315 4.7167, 15.239 0.21
AKR/J m 6.8425 2.225   11 0.67087 0.3252 2.9264, 10.928 -0.23
BALB/cJ f 13.21 4.3389   11 1.3082 0.3285 6.475, 20.078 1.2
BALB/cJ m 14.655 4.6211   11 1.3933 0.3153 8.1889, 23.79 2.28
BTBR T+ Itpr3tf/J f 7.3363 2.7512   12 0.7942 0.375 3.1375, 12.182 -0.6
BTBR T+ Itpr3tf/J m 6.4182 2.6533   12 0.76594 0.4134 2.9694, 10.839 -0.37
BUB/BnJ f 12.857 3.7829   11 1.1406 0.2942 6.8875, 18.56 1.1
BUB/BnJ m 9.4682 3.8135   11 1.1498 0.4028 4.7819, 17.533 0.61
C3H/HeJ f 5.304 2.3662   12 0.68306 0.4461 2.7708, 9.2056 -1.23
C3H/HeJ m 6.2322 1.653   12 0.47718 0.2652 3.7083, 9.7583 -0.43
C3H/HeOuJ f 14.008 4.3054   12 1.2429 0.3073 5.8931, 20.104 1.45
C3H/HeOuJ m 11.727 2.5521   12 0.73673 0.2176 7.1875, 15.031 1.34
C57BL/6J f 11.802 3.4262   12 0.98907 0.2903 8.1278, 18.876 0.77
C57BL/6J m 11.969 3.0832   12 0.89004 0.2576 6.0472, 16.719 1.42
C57BL/6NCrl f 12.364 5.6342   12 1.6265 0.4557 5.1222, 26.4 0.94
C57BL/6NCrl m 9.7416 3.7088   12 1.0706 0.3807 4.5583, 15.974 0.7
C57BL/6NJ f 11.081 3.347   12 0.96619 0.3021 6.4694, 18.374 0.55
C57BL/6NJ m 9.5616 3.528   12 1.0185 0.369 5.0139, 16.929 0.64
CBA/J f 10.748 1.9375   12 0.55931 0.1803 6.9, 13.738 0.45
CBA/J m 7.4614 3.0367   12 0.87663 0.407 3.2681, 12.843 -0.03
DBA/1J f 8.9485 3.854   11 1.162 0.4307 4.1069, 16.479 -0.11
DBA/1J m 7.5078 2.4515   12 0.7077 0.3265 4.4486, 12.776 -0.02
DBA/2J f 7.8518 4.879   12 1.4084 0.6214 3.4, 22.703 -0.44
DBA/2J m 9.0273 4.1038   11 1.2374 0.4546 4.0389, 17.807 0.47
FVB/NJ f 13.398 2.8971   12 0.83631 0.2162 7.2403, 17.76 1.26
FVB/NJ m 8.2142 2.4219   12 0.69914 0.2948 3.0889, 11.622 0.21
KK/HlJ f 9.6161 2.6234   12 0.75731 0.2728 4.4167, 14.854 0.1
KK/HlJ m 7.9957 2.7038   12 0.78053 0.3382 4.7278, 14.758 0.14
LG/J f 6.8846 2.7502   12 0.79392 0.3995 3.2611, 12.358 -0.74
LG/J m 6.7582 1.9275   12 0.55643 0.2852 4.6153, 10.31 -0.26
LP/J f 4.452 2.2665   10 0.71672 0.5091 1.8042, 10.024 -1.49
LP/J m 6.0837 4.1343   11 1.2466 0.6796 1.3222, 16.724 -0.48
MA/MyJ f 7.9289 3.9177   10 1.2389 0.4941 3.7806, 14.408 -0.42
MA/MyJ m 10.874 6.0217   9 2.0072 0.5537 4.3222, 22.435 1.06
MRL/MpJ f 14.334 4.9088   12 1.417 0.3425 7.9917, 22.756 1.55
MRL/MpJ m 11.134 2.8405   12 0.81999 0.2551 6.4958, 16.378 1.15
NOD/ShiLtJ f 14.699 10.344   12 2.986 0.7037 3.3417, 43.504 1.66
NOD/ShiLtJ m 12.524 14.841   12 4.2843 1.185 4.425, 58.94 1.59
NON/ShiLtJ f 8.8219 3.3379   10 1.0555 0.3784 4.7625, 14.262 -0.15
NON/ShiLtJ m 6.8368 1.3012   12 0.37563 0.1903 4.7958, 8.8361 -0.24
NZB/BlNJ f 5.4171 1.9706   12 0.56886 0.3638 3.1153, 8.4208 -1.19
NZB/BlNJ m 3.3681 0.71611   12 0.20672 0.2126 2.2069, 4.6139 -1.35
NZO/HlLtJ f 5.7899 1.5933   12 0.45995 0.2752 3.575, 9.9292 -1.08
NZO/HlLtJ m 5.2475 1.5535   10 0.49126 0.296 2.9972, 8.7264 -0.75
NZW/LacJ f 6.0418 1.3738   12 0.39659 0.2274 3.5403, 8.1792 -1.0
NZW/LacJ m 3.7499 0.98259   11 0.29626 0.262 2.2611, 5.6 -1.23
RIIIS/J f 8.5316 4.1661   11 1.2561 0.4883 2.9764, 16.357 -0.23
RIIIS/J m 4.8208 0.80908   9 0.26969 0.1678 3.6194, 6.4556 -0.88
SJL/J f 12.621 15.263   11 4.6019 1.2093 3.4111, 53.23 1.02
SJL/J m 4.1368 2.3948   12 0.69131 0.5789 2.1389, 10.965 -1.1
SM/J f 9.1721 2.4958   9 0.83193 0.2721 5.7917, 13.122 -0.04
SM/J m 4.6014 2.6974   9 0.89914 0.5862 1.7514, 10.775 -0.95
SWR/J f 9.2969 8.8741   9 2.958 0.9545 3.5403, 32.394 0.0
SWR/J m 4.2216 2.451   9 0.817 0.5806 2.3056, 9.3069 -1.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.9802083333 1.2805951414 5.4951104298 0.4653062368
129S1/SvImJ m 2.938334 1.402821692 5.6932712163 0.1833967837
129X1/SvJ f 4.8613333333 1.8110350169 8.4179419862 1.3047246804
129X1/SvJ m 3.136805 1.5684023318 6.2169184447 0.0566915553
A/J f 8.5156416667 1.2805951414 11.0305437632 6.0007395702
A/J m 9.802275 1.2805951414 12.3171770965 7.2873729035
AKR/J f 9.9626416667 1.2805951414 12.4775437632 7.4477395702
AKR/J m 6.8424545455 1.3375380027 9.4691841169 4.215724974
BALB/cJ f 13.2100454545 1.3375380027 15.836775026 10.5833158831
BALB/cJ m 14.6546272727 1.3375380027 17.2813568442 12.0278977012
BTBR T+ Itpr3tf/J f 7.3363083333 1.2805951414 9.8512104298 4.8214062368
BTBR T+ Itpr3tf/J m 6.4181916667 1.2805951414 8.9330937632 3.9032895702
BUB/BnJ f 12.8568272727 1.3375380027 15.4835568442 10.2300977012
BUB/BnJ m 9.4682181818 1.3375380027 12.0949477533 6.8414886103
C3H/HeJ f 5.3040333333 1.2805951414 7.8189354298 2.7891312368
C3H/HeJ m 6.2321666667 1.2805951414 8.7470687632 3.7172645702
C3H/HeOuJ f 14.0082583333 1.2805951414 16.5231604298 11.4933562368
C3H/HeOuJ m 11.7272416667 1.2805951414 14.2421437632 9.2123395702
C57BL/6J f 11.80165 1.2805951414 14.3165520965 9.2867479035
C57BL/6J m 11.969275 1.2805951414 14.4841770965 9.4543729035
C57BL/6NCrl f 12.3638583333 1.2805951414 14.8787604298 9.8489562368
C57BL/6NCrl m 9.7416166667 1.2805951414 12.2565187632 7.2267145702
C57BL/6NJ f 11.0808166667 1.2805951414 13.5957187632 8.5659145702
C57BL/6NJ m 9.5616416667 1.2805951414 12.0765437632 7.0467395702
CBA/J f 10.74755 1.2805951414 13.2624520965 8.2326479035
CBA/J m 7.4614166667 1.2805951414 9.9763187632 4.9465145702
DBA/1J f 8.9484909091 1.3375380027 11.5752204806 6.3217613376
DBA/1J m 7.5078333333 1.2805951414 10.0227354298 4.9929312368
DBA/2J f 7.8517583333 1.2805951414 10.3666604298 5.3368562368
DBA/2J m 9.0273 1.3375380027 11.6540295715 6.4005704285
FVB/NJ f 13.3978166667 1.2805951414 15.9127187632 10.8829145702
FVB/NJ m 8.2142 1.2805951414 10.7291020965 5.6992979035
KK/HlJ f 9.6160666667 1.2805951414 12.1309687632 7.1011645702
KK/HlJ m 7.9957166667 1.2805951414 10.5106187632 5.4808145702
LG/J f 6.8845583333 1.2805951414 9.3994604298 4.3696562368
LG/J m 6.7582416667 1.2805951414 9.2731437632 4.2433395702
LP/J f 4.45199 1.402821692 7.2069272163 1.6970527837
LP/J m 6.0837272727 1.3375380027 8.7104568442 3.4569977012
MA/MyJ f 7.92886 1.402821692 10.6837972163 5.1739227837
MA/MyJ m 10.8743888889 1.4787038992 13.7783476937 7.9704300841
MRL/MpJ f 14.3342916667 1.2805951414 16.8491937632 11.8193895702
MRL/MpJ m 11.133925 1.2805951414 13.6488270965 8.6190229035
NOD/ShiLtJ f 14.6990333333 1.2805951414 17.2139354298 12.1841312368
NOD/ShiLtJ m 12.523825 1.2805951414 15.0387270965 10.0089229035
NON/ShiLtJ f 8.82188 1.402821692 11.5768172163 6.0669427837
NON/ShiLtJ m 6.8368 1.2805951414 9.3517020965 4.3218979035
NZB/BlNJ f 5.417125 1.2805951414 7.9320270965 2.9022229035
NZB/BlNJ m 3.36805 1.2805951414 5.8829520965 0.8531479035
NZO/HlLtJ f 5.789925 1.2805951414 8.3048270965 3.2750229035
NZO/HlLtJ m 5.2475 1.402821692 8.0024372163 2.4925627837
NZW/LacJ f 6.0417833333 1.2805951414 8.5566854298 3.5268812368
NZW/LacJ m 3.7498636364 1.3375380027 6.3765932078 1.1231340649
RIIIS/J f 8.5315636364 1.3375380027 11.1582932078 5.9048340649
RIIIS/J m 4.8208222222 1.4787038992 7.724781027 1.9168634174
SJL/J f 12.6207454545 1.3375380027 15.247475026 9.9940158831
SJL/J m 4.136775 1.2805951414 6.6516770965 1.6218729035
SM/J f 9.1720666667 1.4787038992 12.0760254714 6.2681078619
SM/J m 4.6014 1.4787038992 7.5053588048 1.6974411952
SWR/J f 9.2969111111 1.4787038992 12.2008699159 6.3929523063
SWR/J m 4.2216111111 1.4787038992 7.1255699159 1.3176523063


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.9592711667 0.949714775 4.824372479 1.0941698544
129X1/SvJ both 3.9990691667 1.1978870676 6.3515446682 1.6465936651
A/J both 9.1589583333 0.9055175085 10.9372626598 7.3806540069
AKR/J both 8.4025481061 0.9258687576 10.2208193177 6.5842768944
BALB/cJ both 13.9323363636 0.9457821918 15.789714656 12.0749580713
BTBR T+ Itpr3tf/J both 6.87725 0.9055175085 8.6555543264 5.0989456736
BUB/BnJ both 11.1625227273 0.9457821918 13.0199010196 9.3051444349
C3H/HeJ both 5.7681 0.9055175085 7.5464043264 3.9897956736
C3H/HeOuJ both 12.86775 0.9055175085 14.6460543264 11.0894456736
C57BL/6J both 11.8854625 0.9055175085 13.6637668264 10.1071581736
C57BL/6NCrl both 11.0527375 0.9055175085 12.8310418264 9.2744331736
C57BL/6NJ both 10.3212291667 0.9055175085 12.0995334931 8.5429248402
CBA/J both 9.1044833333 0.9055175085 10.8827876598 7.3261790069
DBA/1J both 8.2281621212 0.9258687576 10.0464333329 6.4098909096
DBA/2J both 8.4395291667 0.9258687576 10.2578003783 6.621257955
FVB/NJ both 10.8060083333 0.9055175085 12.5843126598 9.0277040069
KK/HlJ both 8.8058916667 0.9055175085 10.5841959931 7.0275873402
LG/J both 6.8214 0.9055175085 8.5997043264 5.0430956736
LP/J both 5.2678586364 0.9691383555 7.1711050279 3.3646122448
MA/MyJ both 9.4016244444 1.0191263319 11.4030399314 7.4002089575
MRL/MpJ both 12.7341083333 0.9055175085 14.5124126598 10.9558040069
NOD/ShiLtJ both 13.6114291667 0.9055175085 15.3897334931 11.8331248402
NON/ShiLtJ both 7.82934 0.949714775 9.6944413123 5.9642386877
NZB/BlNJ both 4.3925875 0.9055175085 6.1708918264 2.6142831736
NZO/HlLtJ both 5.5187125 0.949714775 7.3838138123 3.6536111877
NZW/LacJ both 4.8958234848 0.9258687576 6.7140946965 3.0775522732
RIIIS/J both 6.6761929293 0.9969419655 8.6340415561 4.7183443025
SJL/J both 8.3787602273 0.9258687576 10.1970314389 6.5604890156
SM/J both 6.8867333333 1.0456015545 8.9401422965 4.8333243702
SWR/J both 6.7592611111 1.0456015545 8.8126700743 4.705852148




  GWAS USING LINEAR MIXED MODELS