Project measure / variable:   Zimmermann1   rearing_act_light

ID, description, units MPD:112176   rearing_act_light   rearing movement, number of z-axis beam breaks, second day (beam breaks/min)   [n/min]  during light  
Data set, strains Zimmermann1   inbred   30 strains     sex: both     age: 7-15wks
Procedure monitoring system
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Zimmermann1 - rearing movement, number of z-axis beam breaks, second day (beam breaks/min) during light



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means3.5976   n/min 2.7533   n/min
Median of the strain means2.974   n/min 2.6651   n/min
SD of the strain means± 2.583 ± 1.4129
Coefficient of variation (CV)0.718 0.5132
Min–max range of strain means0.98598   –   13.78   n/min 0.68111   –   7.4774   n/min
Mean sample size per strain11.2   mice 11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 111.3973 111.3973 31.3218 < 0.0001
strain 29 2551.0466 87.9671 24.7339 < 0.0001
sex:strain 29 362.849 12.512 3.518 < 0.0001
Residuals 611 2173.0463 3.5565


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.0958 1.0431   12 0.30111 0.9518 0.17222, 3.9472 -0.97
129S1/SvImJ m 0.68111 0.35656   10 0.11276 0.5235 0.16944, 1.2181 -1.47
129X1/SvJ f 2.7977 3.0719   6 1.2541 1.098 0.3, 8.0986 -0.31
129X1/SvJ m 1.2597 1.6179   8 0.572 1.2843 0.23333, 5.15 -1.06
A/J f 2.4943 1.2071   12 0.34847 0.484 1.1472, 5.3819 -0.43
A/J m 2.5677 1.0945   12 0.31596 0.4263 1.3361, 4.8056 -0.13
AKR/J f 1.5818 1.3125   12 0.37889 0.8297 0.73056, 4.9667 -0.78
AKR/J m 1.1973 0.52577   11 0.15853 0.4391 0.48611, 2.0167 -1.1
BALB/cJ f 9.8116 4.3912   11 1.324 0.4475 3.6264, 16.41 2.41
BALB/cJ m 4.7653 2.3407   11 0.70575 0.4912 2.3125, 9.6194 1.42
BTBR T+ Itpr3tf/J f 2.9939 1.1066   12 0.31943 0.3696 1.1597, 5.1597 -0.23
BTBR T+ Itpr3tf/J m 2.9024 2.3082   12 0.66631 0.7952 0.99444, 9.7472 0.11
BUB/BnJ f 4.7239 2.5918   11 0.78146 0.5487 2.1153, 10.006 0.44
BUB/BnJ m 4.4199 4.1588   11 1.2539 0.9409 0.78333, 15.922 1.18
C3H/HeJ f 1.6412 0.79748   12 0.23021 0.4859 0.66944, 3.1944 -0.76
C3H/HeJ m 2.4515 0.88681   12 0.256 0.3617 1.3306, 4.1667 -0.21
C3H/HeOuJ f 5.3601 2.0423   12 0.58956 0.381 2.7056, 8.9542 0.68
C3H/HeOuJ m 4.5981 2.2883   12 0.66057 0.4977 2.7208, 10.554 1.31
C57BL/6J f 2.5297 1.2123   12 0.34997 0.4792 1.0319, 4.9069 -0.41
C57BL/6J m 1.9968 1.5721   12 0.45381 0.7873 0.54306, 5.325 -0.54
C57BL/6NCrl f 4.2619 2.0683   12 0.59706 0.4853 2.0611, 9.0056 0.26
C57BL/6NCrl m 3.1065 1.9244   12 0.55552 0.6195 1.3403, 7.0375 0.25
C57BL/6NJ f 3.3472 1.3496   12 0.3896 0.4032 1.2694, 5.7347 -0.1
C57BL/6NJ m 3.1881 1.4593   12 0.42125 0.4577 0.64861, 6.2069 0.31
CBA/J f 2.954 1.0956   12 0.31628 0.3709 1.6264, 5.0194 -0.25
CBA/J m 2.9549 0.93013   12 0.26851 0.3148 1.7347, 4.7014 0.14
DBA/1J f 0.98598 0.38316   11 0.11553 0.3886 0.54444, 1.7139 -1.01
DBA/1J m 1.4337 1.0029   12 0.28952 0.6995 0.42222, 4.0917 -0.93
DBA/2J f 1.9127 1.0251   12 0.29593 0.536 0.29306, 4.4306 -0.65
DBA/2J m 1.7819 1.1769   11 0.35486 0.6605 0.56667, 4.4292 -0.69
FVB/NJ f 13.78 3.5084   12 1.0128 0.2546 7.7153, 19.881 3.94
FVB/NJ m 7.4774 4.8938   12 1.4127 0.6545 3.225, 18.321 3.34
KK/HlJ f 1.9516 1.2259   12 0.35388 0.6281 0.68194, 5.1181 -0.64
KK/HlJ m 1.3509 0.65541   12 0.1892 0.4852 0.53194, 2.575 -0.99
LG/J f 4.108 2.1421   12 0.61837 0.5214 1.0556, 9.4069 0.2
LG/J m 4.3237 2.2192   12 0.64064 0.5133 1.2569, 8.7056 1.11
LP/J f 2.4775 1.1367   10 0.35944 0.4588 1.4208, 5.1194 -0.43
LP/J m 1.9004 0.97407   11 0.29369 0.5126 0.45, 4.0444 -0.6
MA/MyJ f 2.8193 1.1002   10 0.34791 0.3902 1.875, 5.5306 -0.3
MA/MyJ m 3.175 1.9606   9 0.65353 0.6175 1.2125, 6.7792 0.3
MRL/MpJ f 2.8558 0.79932   12 0.23074 0.2799 1.3528, 4.1278 -0.29
MRL/MpJ m 1.4623 0.44469   12 0.12837 0.3041 0.50556, 2.3056 -0.91
NOD/ShiLtJ f 3.6875 1.7625   12 0.50878 0.478 1.2361, 6.3722 0.03
NOD/ShiLtJ m 3.1935 1.3196   12 0.38094 0.4132 1.3694, 5.6472 0.31
NON/ShiLtJ f 3.6946 2.4747   10 0.78257 0.6698 1.5889, 10.211 0.04
NON/ShiLtJ m 2.0874 0.67081   12 0.19365 0.3214 1.1833, 3.4139 -0.47
NZB/BlNJ f 1.8416 0.97596   12 0.28174 0.53 0.36389, 3.425 -0.68
NZB/BlNJ m 1.1398 0.98773   12 0.28513 0.8666 0.15556, 3.8319 -1.14
NZO/HlLtJ f 1.2656 0.65908   12 0.19026 0.5208 0.33472, 2.6056 -0.9
NZO/HlLtJ m 1.8906 0.99444   10 0.31447 0.526 0.32778, 3.5417 -0.61
NZW/LacJ f 3.1956 0.95872   12 0.27676 0.3 1.8986, 5.1347 -0.16
NZW/LacJ m 2.441 0.72499   11 0.21859 0.297 1.4792, 3.6694 -0.22
RIIIS/J f 4.2782 2.1916   11 0.66079 0.5123 1.9486, 9.1306 0.26
RIIIS/J m 3.2015 1.2098   9 0.40328 0.3779 1.4597, 5.0819 0.32
SJL/J f 3.7633 2.8449   11 0.85776 0.7559 1.2042, 11.169 0.06
SJL/J m 2.7625 1.3455   12 0.38841 0.4871 1.2681, 6.0819 0.01
SM/J f 5.5547 2.9609   9 0.98695 0.533 1.6333, 10.365 0.76
SM/J m 3.8895 1.7884   9 0.59612 0.4598 1.5292, 7.2403 0.8
SWR/J f 4.1615 3.5773   9 1.1924 0.8596 1.6806, 12.99 0.22
SWR/J m 2.9988 1.1327   9 0.37757 0.3777 1.2292, 4.7042 0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0958391667 0.5444064474 2.1649740335 0.0267042998
129S1/SvImJ m 0.681115 0.5963673834 1.8522935672 -0.4900635672
129X1/SvJ f 2.797685 0.7699069814 4.3096700287 1.2856999713
129X1/SvJ m 1.25972625 0.6667590044 2.569143695 -0.049691195
A/J f 2.494325 0.5444064474 3.5634598668 1.4251901332
A/J m 2.5677 0.5444064474 3.6368348668 1.4985651332
AKR/J f 1.5818375 0.5444064474 2.6509723668 0.5127026332
AKR/J m 1.1973481818 0.5686139895 2.3140231309 0.0806732327
BALB/cJ f 9.8116272727 0.5686139895 10.9283022218 8.6949523236
BALB/cJ m 4.7652727273 0.5686139895 5.8819476764 3.6485977782
BTBR T+ Itpr3tf/J f 2.9938583333 0.5444064474 4.0629932002 1.9247234665
BTBR T+ Itpr3tf/J m 2.9024283333 0.5444064474 3.9715632002 1.8332934665
BUB/BnJ f 4.7239 0.5686139895 5.8405749491 3.6072250509
BUB/BnJ m 4.4199390909 0.5686139895 5.53661404 3.3032641418
C3H/HeJ f 1.6412033333 0.5444064474 2.7103382002 0.5720684665
C3H/HeJ m 2.451525 0.5444064474 3.5206598668 1.3823901332
C3H/HeOuJ f 5.3600833333 0.5444064474 6.4292182002 4.2909484665
C3H/HeOuJ m 4.5981416667 0.5444064474 5.6672765335 3.5290067998
C57BL/6J f 2.5297416667 0.5444064474 3.5988765335 1.4606067998
C57BL/6J m 1.9967533333 0.5444064474 3.0658882002 0.9276184665
C57BL/6NCrl f 4.2619166667 0.5444064474 5.3310515335 3.1927817998
C57BL/6NCrl m 3.1064833333 0.5444064474 4.1756182002 2.0373484665
C57BL/6NJ f 3.3472166667 0.5444064474 4.4163515335 2.2780817998
C57BL/6NJ m 3.1880841667 0.5444064474 4.2572190335 2.1189492998
CBA/J f 2.9540333333 0.5444064474 4.0231682002 1.8848984665
CBA/J m 2.9548583333 0.5444064474 4.0239932002 1.8857234665
DBA/1J f 0.9859818182 0.5686139895 2.1026567673 -0.1306931309
DBA/1J m 1.4336916667 0.5444064474 2.5028265335 0.3645567998
DBA/2J f 1.9127291667 0.5444064474 2.9818640335 0.8435942998
DBA/2J m 1.78195 0.5686139895 2.8986249491 0.6652750509
FVB/NJ f 13.7800416667 0.5444064474 14.8491765335 12.7109067998
FVB/NJ m 7.4774416667 0.5444064474 8.5465765335 6.4083067998
KK/HlJ f 1.95162 0.5444064474 3.0207548668 0.8824851332
KK/HlJ m 1.3509241667 0.5444064474 2.4200590335 0.2817892998
LG/J f 4.1079833333 0.5444064474 5.1771182002 3.0388484665
LG/J m 4.323725 0.5444064474 5.3928598668 3.2545901332
LP/J f 2.47748 0.5963673834 3.6486585672 1.3063014328
LP/J m 1.9003781818 0.5686139895 3.0170531309 0.7837032327
MA/MyJ f 2.8193 0.5963673834 3.9904785672 1.6481214328
MA/MyJ m 3.1750111111 0.6286264179 4.4095417174 1.9404805048
MRL/MpJ f 2.855775 0.5444064474 3.9249098668 1.7866401332
MRL/MpJ m 1.4622658333 0.5444064474 2.5314007002 0.3931309665
NOD/ShiLtJ f 3.6874833333 0.5444064474 4.7566182002 2.6183484665
NOD/ShiLtJ m 3.193525 0.5444064474 4.2626598668 2.1243901332
NON/ShiLtJ f 3.69458 0.5963673834 4.8657585672 2.5234014328
NON/ShiLtJ m 2.0873833333 0.5444064474 3.1565182002 1.0182484665
NZB/BlNJ f 1.841555 0.5444064474 2.9106898668 0.7724201332
NZB/BlNJ m 1.1398108333 0.5444064474 2.2089457002 0.0706759665
NZO/HlLtJ f 1.2656316667 0.5444064474 2.3347665335 0.1964967998
NZO/HlLtJ m 1.890558 0.5963673834 3.0617365672 0.7193794328
NZW/LacJ f 3.1956 0.5444064474 4.2647348668 2.1264651332
NZW/LacJ m 2.4410454545 0.5686139895 3.5577204037 1.3243705054
RIIIS/J f 4.2781636364 0.5686139895 5.3948385855 3.1614886872
RIIIS/J m 3.2015444444 0.6286264179 4.4360750508 1.9670138381
SJL/J f 3.7633454545 0.5686139895 4.8800204037 2.6466705054
SJL/J m 2.7624916667 0.5444064474 3.8316265335 1.6933567998
SM/J f 5.5547333333 0.6286264179 6.7892639397 4.320202727
SM/J m 3.8895111111 0.6286264179 5.1240417174 2.6549805048
SWR/J f 4.1615333333 0.6286264179 5.3960639397 2.927002727
SWR/J m 2.9987555556 0.6286264179 4.2332861619 1.7642249492


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.8884770833 0.4037426272 1.6813687215 0.0955854451
129X1/SvJ both 2.028705625 0.5092456014 3.028789718 1.028621532
A/J both 2.5310125 0.3849534907 3.2870050143 1.7750199857
AKR/J both 1.3895928409 0.3936052112 2.1625760725 0.6166096093
BALB/cJ both 7.28845 0.4020708079 8.0780584289 6.4988415711
BTBR T+ Itpr3tf/J both 2.9481433333 0.3849534907 3.7041358477 2.192150819
BUB/BnJ both 4.5719195455 0.4020708079 5.3615279744 3.7823111166
C3H/HeJ both 2.0463641667 0.3849534907 2.802356681 1.2903716523
C3H/HeOuJ both 4.9791125 0.3849534907 5.7351050143 4.2231199857
C57BL/6J both 2.2632475 0.3849534907 3.0192400143 1.5072549857
C57BL/6NCrl both 3.6842 0.3849534907 4.4401925143 2.9282074857
C57BL/6NJ both 3.2676504167 0.3849534907 4.023642931 2.5116579023
CBA/J both 2.9544458333 0.3849534907 3.7104383477 2.198453319
DBA/1J both 1.2098367424 0.3936052112 1.982819974 0.4368535108
DBA/2J both 1.8473395833 0.3936052112 2.620322815 1.0743563517
FVB/NJ both 10.6287416667 0.3849534907 11.384734181 9.8727491523
KK/HlJ both 1.6512720833 0.3849534907 2.4072645977 0.895279569
LG/J both 4.2158541667 0.3849534907 4.971846681 3.4598616523
LP/J both 2.1889290909 0.4119999773 2.9980369604 1.3798212214
MA/MyJ both 2.9971555556 0.4332508596 3.8479970587 2.1463140524
MRL/MpJ both 2.1590204167 0.3849534907 2.915012931 1.4030279023
NOD/ShiLtJ both 3.4405041667 0.3849534907 4.196496681 2.6845116523
NON/ShiLtJ both 2.8909816667 0.4037426272 3.6838733049 2.0980900285
NZB/BlNJ both 1.4906829167 0.3849534907 2.246675431 0.7346904023
NZO/HlLtJ both 1.5780948333 0.4037426272 2.3709864715 0.7852031951
NZW/LacJ both 2.8183227273 0.3936052112 3.5913059589 2.0453394957
RIIIS/J both 3.7398540404 0.4238198445 4.5721744054 2.9075336754
SJL/J both 3.2629185606 0.3936052112 4.0359017922 2.489935329
SM/J both 4.7221222222 0.444506003 5.5950671855 3.8491772589
SWR/J both 3.5801444444 0.444506003 4.4530894078 2.7071994811




  GWAS USING LINEAR MIXED MODELS