Project measure / variable:   Auwerx1   subcut_adip_wt_HFD

ID, description, units MPD:111411   subcut_adip_wt_HFD   subcutaneous adipose tissue weight   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   53 strains     sex: m     age: 29wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Auwerx1 - subcutaneous adipose tissue weight HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested53 strains
Mean of the strain means2.2511   g
Median of the strain means2.202   g
SD of the strain means± 0.93816
Coefficient of variation (CV)0.4168
Min–max range of strain means0.72716   –   5.4832   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 52 220.8368 4.2469 9.1362 < 0.0001
Residuals 175 81.3464 0.4648


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 1.3511 0.3467   5 0.15505 0.2566 0.9112, 1.823 -0.96
BXD100 m 2.35 0.4838   5 0.21636 0.2059 1.8901, 2.9732 0.11
BXD101 m 3.642 0.46059   4 0.23029 0.1265 3.115, 4.089 1.48
BXD11 m 3.5387 0.62366   4 0.31183 0.1762 3.0, 4.438 1.37
BXD12 m 0.88664 0.28364   5 0.12685 0.3199 0.4187, 1.174 -1.45
BXD16 m 2.638 0.35581   5 0.15912 0.1349 2.308, 3.065 0.41
BXD2 m 2.0773 0.70013   5 0.31311 0.337 0.9135, 2.7095 -0.19
BXD27 m 1.2967 0.405   4 0.2025 0.3123 0.815, 1.65 -1.02
BXD32 m 1.9255 0.50354   3 0.29072 0.2615 1.4501, 2.4531 -0.35
BXD34 m 0.72716 0.54909   5 0.24556 0.7551 0.299, 1.5163 -1.62
BXD39 m 2.072 0.22599   5 0.10106 0.1091 1.78, 2.36 -0.19
BXD40 m 0.764 0.33282   4 0.16641 0.4356 0.347, 1.123 -1.59
BXD43 m 2.197 0.25273   3 0.14591 0.115 2.0376, 2.4884 -0.06
BXD44 m 5.4832 1.0578   7 0.39983 0.1929 4.41, 7.2813 3.45
BXD45 m 1.3299 0.44438   4 0.22219 0.3341 0.9726, 1.9554 -0.98
BXD48 m 2.9344 0.51663   5 0.23105 0.1761 2.2779, 3.44 0.73
BXD48a m 2.4934 0.37691   3 0.21761 0.1512 2.1347, 2.8862 0.26
BXD49 m 2.5387 2.4706   4 1.2353 0.9732 0.7152, 5.9676 0.31
BXD50 m 2.1764 0.21122   5 0.09446 0.0971 1.951, 2.477 -0.08
BXD51 m 4.6722 0.61151   4 0.30575 0.1309 4.1219, 5.5368 2.58
BXD53 m 1.3184 0.18455   5 0.08253 0.14 1.12, 1.606 -0.99
BXD55 m 1.6774 0.26446   4 0.13223 0.1577 1.2814, 1.8279 -0.61
BXD56 m 0.9186 0.00763675   2   0.0054 0.0083 0.9132, 0.924 -1.42
BXD6 m 2.3826 0.81237   5 0.3633 0.341 1.2645, 3.2782 0.14
BXD60 m 3.6958 0.86231   5 0.38564 0.2333 2.883, 4.994 1.54
BXD61 m 2.1592 0.62445   5 0.27926 0.2892 1.2513, 3.0065 -0.1
BXD62 m 1.55 0.16727   4 0.08364 0.1079 1.3122, 1.691 -0.75
BXD63 m 1.6797 0.04476   2   0.03165 0.0266 1.648, 1.7113 -0.61
BXD64 m 2.9047 0.73176   4 0.36588 0.2519 2.1254, 3.8465 0.7
BXD65 m 2.4957 0.33933   4 0.16967 0.136 2.1704, 2.9691 0.26
BXD65a m 2.2233 0.8498   4 0.4249 0.3822 1.289, 3.248 -0.03
BXD66 m 3.0832 0.51978   5 0.23245 0.1686 2.2711, 3.5541 0.89
BXD67 m 2.7698 1.2957   5 0.57946 0.4678 1.862, 5.024 0.55
BXD68 m 2.282 0.17984   3 0.10383 0.0788 2.113, 2.471 0.03
BXD69 m 1.9151 0.22256   5 0.09953 0.1162 1.7221, 2.2726 -0.36
BXD70 m 2.5555 0.01714   3 0.00989787 0.0067 2.5371, 2.571 0.32
BXD71 m 2.7376 0.56234   3 0.32466 0.2054 2.108, 3.1899 0.52
BXD73 m 1.6922 0.57554   4 0.28777 0.3401 0.9572, 2.3199 -0.6
BXD73b m 2.5357 0.51934   5 0.23226 0.2048 2.028, 3.1686 0.3
BXD75 m 2.0449 0.66931   5 0.29932 0.3273 1.3007, 2.8344 -0.22
BXD77 m 1.7535 0.53243   5 0.23811 0.3036 1.0914, 2.334 -0.53
BXD79 m 1.5544 0.37186   5 0.1663 0.2392 1.0254, 2.0393 -0.74
BXD8 m 0.9209 0.325   5 0.14534 0.3529 0.5101, 1.2761 -1.42
BXD81 m 3.7271 0.13427   3 0.07752 0.036 3.5724, 3.813 1.57
BXD83 m 1.2292 0.43582   4 0.21791 0.3545 0.6182, 1.6166 -1.09
BXD84 m 2.3663 0.83901   3 0.4844 0.3546 1.525, 3.203 0.12
BXD85 m 2.475 0.69516   4 0.34758 0.2809 1.7459, 3.3781 0.24
BXD87 m 1.3802 0.42074   5 0.18816 0.3048 0.9604, 2.074 -0.93
BXD89 m 1.6682 0.12867   4 0.06433 0.0771 1.5434, 1.7992 -0.62
BXD90 m 2.8902 1.7808   4 0.89042 0.6162 1.5329, 5.3765 0.68
BXD95 m 2.202 0.81424   5 0.36414 0.3698 1.1151, 3.047 -0.05
BXD98 m 2.7188 0.41111   5 0.18385 0.1512 2.33, 3.242 0.5
BXD99 m 2.7053 0.43101   5 0.19275 0.1593 2.2104, 3.272 0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.35112 0.3049054477 1.9528851913 0.7493548087
BXD100 m 2.34996 0.3049054477 2.9517251913 1.7481948087
BXD101 m 3.642 0.3408946539 4.3147939371 2.9692060629
BXD11 m 3.53875 0.3408946539 4.2115439371 2.8659560629
BXD12 m 0.88664 0.3049054477 1.4884051913 0.2848748087
BXD16 m 2.638 0.3049054477 3.2397651913 2.0362348087
BXD2 m 2.07728 0.3049054477 2.6790451913 1.4755148087
BXD27 m 1.29665 0.3408946539 1.9694439371 0.6238560629
BXD32 m 1.9254666667 0.3936312404 2.7023421881 1.1485911452
BXD34 m 0.72716 0.3049054477 1.3289251913 0.1253948087
BXD39 m 2.072 0.3049054477 2.6737651913 1.4702348087
BXD40 m 0.764 0.3408946539 1.4367939371 0.0912060629
BXD43 m 2.197 0.3936312404 2.9738755214 1.4201244786
BXD44 m 5.4831571429 0.2576921364 5.9917415546 4.9745727311
BXD45 m 1.32995 0.3408946539 2.0027439371 0.6571560629
BXD48 m 2.93442 0.3049054477 3.5361851913 2.3326548087
BXD48a m 2.4934 0.3936312404 3.2702755214 1.7165244786
BXD49 m 2.53865 0.3408946539 3.2114439371 1.8658560629
BXD50 m 2.1764 0.3049054477 2.7781651913 1.5746348087
BXD51 m 4.6722 0.3408946539 5.3449939371 3.9994060629
BXD53 m 1.3184 0.3049054477 1.9201651913 0.7166348087
BXD55 m 1.677375 0.3408946539 2.3501689371 1.0045810629
BXD56 m 0.9186 0.4820978429 1.8700743106 -0.0328743106
BXD6 m 2.38258 0.3049054477 2.9843451913 1.7808148087
BXD60 m 3.6958 0.3049054477 4.2975651913 3.0940348087
BXD61 m 2.1592 0.3049054477 2.7609651913 1.5574348087
BXD62 m 1.55 0.3408946539 2.2227939371 0.8772060629
BXD63 m 1.67965 0.4820978429 2.6311243106 0.7281756894
BXD64 m 2.90465 0.3408946539 3.5774439371 2.2318560629
BXD65 m 2.495675 0.3408946539 3.1684689371 1.8228810629
BXD65a m 2.22325 0.3408946539 2.8960439371 1.5504560629
BXD66 m 3.08322 0.3049054477 3.6849851913 2.4814548087
BXD67 m 2.7698 0.3049054477 3.3715651913 2.1680348087
BXD68 m 2.282 0.3936312404 3.0588755214 1.5051244786
BXD69 m 1.91514 0.3049054477 2.5169051913 1.3133748087
BXD70 m 2.5555333333 0.3936312404 3.3324088548 1.7786578119
BXD71 m 2.7376333333 0.3936312404 3.5145088548 1.9607578119
BXD73 m 1.6922 0.3408946539 2.3649939371 1.0194060629
BXD73b m 2.53574 0.3049054477 3.1375051913 1.9339748087
BXD75 m 2.04492 0.3049054477 2.6466851913 1.4431548087
BXD77 m 1.75348 0.3049054477 2.3552451913 1.1517148087
BXD79 m 1.5544 0.3049054477 2.1561651913 0.9526348087
BXD8 m 0.9209 0.3049054477 1.5226651913 0.3191348087
BXD81 m 3.7271333333 0.3936312404 4.5040088548 2.9502578119
BXD83 m 1.22925 0.3408946539 1.9020439371 0.5564560629
BXD84 m 2.3663333333 0.3936312404 3.1432088548 1.5894578119
BXD85 m 2.474975 0.3408946539 3.1477689371 1.8021810629
BXD87 m 1.38018 0.3049054477 1.9819451913 0.7784148087
BXD89 m 1.668175 0.3408946539 2.3409689371 0.9953810629
BXD90 m 2.89025 0.3408946539 3.5630439371 2.2174560629
BXD95 m 2.202 0.3049054477 2.8037651913 1.6002348087
BXD98 m 2.7188 0.3049054477 3.3205651913 2.1170348087
BXD99 m 2.70528 0.3049054477 3.3070451913 2.1035148087




  GWAS USING LINEAR MIXED MODELS