Project measure / variable:   Auwerx1   perirenal_wt_CD

ID, description, units MPD:111408   perirenal_wt_CD   perirenal white adipose tissue   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - perirenal white adipose tissue CD

BXD66BXD16BXD67BXD65bBXD65BXD60BXD73bBXD34BXD48aBXD98BXD69BXD100BXD44BXD73aBXD68BXD48BXD79BXD63BXD64BXD95BXD11BXD85BXD89BXD84BXD49BXD50BXD71BXD32BXD51BXD62BXD2BXD70BXD39DBA/2JBXD61BXD27BXD73BXD99BXD87BXD65aBXD75BXD1BXD6BXD77BXD101BXD56BXD43BXD81BXD83BXD90BXD8BXD45C57BL/6JBXD55BXD53BXD12BXD40 g 0.00.51.01.52.02.5femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means0.70857   g
Median of the strain means0.58367   g
SD of the strain means± 0.37495
Coefficient of variation (CV)0.5292
Min–max range of strain means0.133   –   1.7822   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 34.9645 0.6244 7.0473 < 0.0001
Residuals 186 16.4789 0.0886


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 57 (57)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 m 0.41256 0.32842   5 0.14687 0.7961 0.1757, 0.9923 -0.79
BXD100 m 1.011 0.39831   3 0.22997 0.394 0.5942, 1.3878 0.81
BXD101 m 0.39272 0.14803   4 0.07401 0.3769 0.2158, 0.5672 -0.84
BXD11 m 0.8553 0.38254   2   0.2705 0.4473 0.5848, 1.1258 0.39
BXD12 m 0.1656 0.0643   5 0.02876 0.3883 0.072, 0.242 -1.45
BXD16 m 1.5102 0.14659   4 0.0733 0.0971 1.3707, 1.649 2.14
BXD2 m 0.56563 0.05332   3 0.03078 0.0943 0.5283, 0.6267 -0.38
BXD27 m 0.53482 0.20276   5 0.09068 0.3791 0.3222, 0.8602 -0.46
BXD32 m 0.58942 0.25081   5 0.11216 0.4255 0.348, 0.978 -0.32
BXD34 m 1.114 0.22964   4 0.11482 0.2061 0.852, 1.3199 1.08
BXD39 m 0.55518 0.08047   5 0.03599 0.1449 0.4951, 0.6908 -0.41
BXD40 m 0.133 0.04133   3 0.02386 0.3107 0.089, 0.171 -1.54
BXD43 m 0.3766 0.24271   3 0.14013 0.6445 0.2315, 0.6568 -0.89
BXD44 m 1.0109 0.45087   9 0.15029 0.446 0.4574, 1.7417 0.81
BXD45 m 0.32426 0.17019   5 0.07611 0.5249 0.1242, 0.5906 -1.02
BXD48 m 0.95434 0.09667   5 0.04323 0.1013 0.8571, 1.0868 0.66
BXD48a m 1.1137 0.26285   5 0.11755 0.236 0.768, 1.4601 1.08
BXD49 m 0.68593 0.1573   4 0.07865 0.2293 0.4833, 0.8669 -0.06
BXD50 m 0.68532 0.28598   4 0.14299 0.4173 0.3011, 0.932 -0.06
BXD51 m 0.58367 0.08501   3 0.04908 0.1456 0.4889, 0.6532 -0.33
BXD53 m 0.2268 0.08714   5 0.03897 0.3842 0.1366, 0.371 -1.28
BXD55 m 0.26644 0.12587   5 0.05629 0.4724 0.0798, 0.3712 -1.18
BXD56 m 0.3768 0.0945   3 0.05456 0.2508 0.2902, 0.4776 -0.88
BXD6 m 0.4009 0.14324   5 0.06406 0.3573 0.2365, 0.5864 -0.82
BXD60 m 1.1943 0.14727   4 0.07364 0.1233 1.0665, 1.377 1.3
BXD61 m 0.55287 0.13844   3 0.07993 0.2504 0.4181, 0.6947 -0.42
BXD62 m 0.5748 0.17172   4 0.08586 0.2988 0.3918, 0.7988 -0.36
BXD63 m 0.8722 0.14792   3 0.0854 0.1696 0.737, 1.0302 0.44
BXD64 m 0.86547 0.14288   4 0.07144 0.1651 0.7154, 1.0428 0.42
BXD65 m 1.3668 0.3046   4 0.1523 0.2229 1.1207, 1.8 1.76
BXD65a m 0.45588 0.10261   5 0.04589 0.2251 0.3628, 0.6021 -0.67
BXD65b m 1.4197 0.2955   4 0.14775 0.2081 1.1949, 1.8202 1.9
BXD66 m 1.7822 0.5186   5 0.23192 0.291 1.2868, 2.5868 2.86
BXD67 m 1.4389 0.80579   5 0.36036 0.56 0.681, 2.6332 1.95
BXD68 m 0.98597 0.38277   3 0.22099 0.3882 0.5443, 1.2213 0.74
BXD69 m 1.047 0.09712   5 0.04343 0.0928 0.8846, 1.131 0.9
BXD70 m 0.5648 0.50803   3 0.29331 0.8995 0.2466, 1.1507 -0.38
BXD71 m 0.65892 0.3033   4 0.15165 0.4603 0.3812, 1.0752 -0.13
BXD73 m 0.49033 0.40412   4 0.20206 0.8242 0.128, 1.0418 -0.58
BXD73a m 0.9988 0.22828   5 0.10209 0.2286 0.8432, 1.4003 0.77
BXD73b m 1.1928 0.93734   5 0.41919 0.7858 0.4555, 2.6721 1.29
BXD75 m 0.45046 0.19117   5 0.08549 0.4244 0.2156, 0.6477 -0.69
BXD77 m 0.40008 0.1641   5 0.07339 0.4102 0.169, 0.5614 -0.82
BXD79 m 0.8751 0.20555   5 0.09193 0.2349 0.5864, 1.0856 0.44
BXD8 m 0.33003 0.22432   4 0.11216 0.6797 0.0618, 0.6109 -1.01
BXD81 m 0.36155 0.23318   4 0.11659 0.6449 0.0763, 0.5865 -0.93
BXD83 m 0.349 0.05078   3 0.02932 0.1455 0.2906, 0.3828 -0.96
BXD84 m 0.70127 0.16851   3 0.09729 0.2403 0.5238, 0.8591 -0.02
BXD85 m 0.8329 0.17712   5 0.07921 0.2127 0.6321, 1.052 0.33
BXD87 m 0.46684 0.11007   5 0.04923 0.2358 0.3334, 0.6078 -0.64
BXD89 m 0.70845 0.13105   4 0.06552 0.185 0.5449, 0.849 0.0
BXD90 m 0.3371 0.1066   4 0.0533 0.3162 0.1931, 0.4506 -0.99
BXD95 m 0.85752 0.30161   4 0.1508 0.3517 0.451, 1.1115 0.4
BXD98 m 1.0958 0.4603   4 0.23015 0.4201 0.4636, 1.506 1.03
BXD99 m 0.48768 0.15438   5 0.06904 0.3166 0.309, 0.6802 -0.59
C57BL/6J m 0.27292 0.12172   5 0.05443 0.446 0.1232, 0.4474 -1.16
DBA/2J m 0.55478 0.19726   4 0.09863 0.3556 0.3724, 0.8327 -0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.41256 0.1331135566 0.6751664396 0.1499535604
BXD100 m 1.0110333333 0.1718488626 1.3500567891 0.6720098776
BXD101 m 0.392725 0.1488254806 0.6863279252 0.0991220748
BXD11 m 0.8553 0.2104710131 1.2705172387 0.4400827613
BXD12 m 0.1656 0.1331135566 0.4282064396 -0.0970064396
BXD16 m 1.5102 0.1488254806 1.8038029252 1.2165970748
BXD2 m 0.5656333333 0.1718488626 0.9046567891 0.2266098776
BXD27 m 0.53482 0.1331135566 0.7974264396 0.2722135604
BXD32 m 0.58942 0.1331135566 0.8520264396 0.3268135604
BXD34 m 1.113975 0.1488254806 1.4075779252 0.8203720748
BXD39 m 0.55518 0.1331135566 0.8177864396 0.2925735604
BXD40 m 0.133 0.1718488626 0.4720234557 -0.2060234557
BXD43 m 0.3766 0.1718488626 0.7156234557 0.0375765443
BXD44 m 1.0109 0.0992169871 1.2066352834 0.8151647166
BXD45 m 0.32426 0.1331135566 0.5868664396 0.0616535604
BXD48 m 0.95434 0.1331135566 1.2169464396 0.6917335604
BXD48a m 1.11374 0.1331135566 1.3763464396 0.8511335604
BXD49 m 0.685925 0.1488254806 0.9795279252 0.3923220748
BXD50 m 0.685325 0.1488254806 0.9789279252 0.3917220748
BXD51 m 0.5836666667 0.1718488626 0.9226901224 0.2446432109
BXD53 m 0.2268 0.1331135566 0.4894064396 -0.0358064396
BXD55 m 0.26644 0.1331135566 0.5290464396 0.0038335604
BXD56 m 0.3768 0.1718488626 0.7158234557 0.0377765443
BXD6 m 0.4009 0.1331135566 0.6635064396 0.1382935604
BXD60 m 1.194275 0.1488254806 1.4878779252 0.9006720748
BXD61 m 0.5528666667 0.1718488626 0.8918901224 0.2138432109
BXD62 m 0.5748 0.1488254806 0.8684029252 0.2811970748
BXD63 m 0.8722 0.1718488626 1.2112234557 0.5331765443
BXD64 m 0.865475 0.1488254806 1.1590779252 0.5718720748
BXD65 m 1.36685 0.1488254806 1.6604529252 1.0732470748
BXD65a m 0.45588 0.1331135566 0.7184864396 0.1932735604
BXD65b m 1.41975 0.1488254806 1.7133529252 1.1261470748
BXD66 m 1.78224 0.1331135566 2.0448464396 1.5196335604
BXD67 m 1.43892 0.1331135566 1.7015264396 1.1763135604
BXD68 m 0.9859666667 0.1718488626 1.3249901224 0.6469432109
BXD69 m 1.047 0.1331135566 1.3096064396 0.7843935604
BXD70 m 0.5648 0.1718488626 0.9038234557 0.2257765443
BXD71 m 0.658925 0.1488254806 0.9525279252 0.3653220748
BXD73 m 0.490325 0.1488254806 0.7839279252 0.1967220748
BXD73a m 0.9988 0.1331135566 1.2614064396 0.7361935604
BXD73b m 1.19284 0.1331135566 1.4554464396 0.9302335604
BXD75 m 0.45046 0.1331135566 0.7130664396 0.1878535604
BXD77 m 0.40008 0.1331135566 0.6626864396 0.1374735604
BXD79 m 0.8751 0.1331135566 1.1377064396 0.6124935604
BXD8 m 0.330025 0.1488254806 0.6236279252 0.0364220748
BXD81 m 0.36155 0.1488254806 0.6551529252 0.0679470748
BXD83 m 0.349 0.1718488626 0.6880234557 0.0099765443
BXD84 m 0.7012666667 0.1718488626 1.0402901224 0.3622432109
BXD85 m 0.8329 0.1331135566 1.0955064396 0.5702935604
BXD87 m 0.46684 0.1331135566 0.7294464396 0.2042335604
BXD89 m 0.70845 0.1488254806 1.0020529252 0.4148470748
BXD90 m 0.3371 0.1488254806 0.6307029252 0.0434970748
BXD95 m 0.857525 0.1488254806 1.1511279252 0.5639220748
BXD98 m 1.095775 0.1488254806 1.3893779252 0.8021720748
BXD99 m 0.48768 0.1331135566 0.7502864396 0.2250735604
C57BL/6J m 0.27292 0.1331135566 0.5355264396 0.0103135604
DBA/2J m 0.554775 0.1488254806 0.8483779252 0.2611720748




  GWAS USING LINEAR MIXED MODELS

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