Project measure / variable:   Auwerx1   kidney_wt_CD

ID, description, units MPD:111404   kidney_wt_CD   kidney weight (both)   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - kidney weight (both) CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means0.47799   g
Median of the strain means0.46805   g
SD of the strain means± 0.07758
Coefficient of variation (CV)0.1623
Min–max range of strain means0.34237   –   0.6709   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 1.3886 0.0248 10.0581 < 0.0001
Residuals 184 0.4536 0.0025


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.49128 0.03063   5 0.0137 0.0623 0.4561, 0.519 0.17
BXD100 m 0.42643 0.02543   3 0.01468 0.0596 0.4115, 0.4558 -0.66
BXD101 m 0.38335 0.03686   4 0.01843 0.0962 0.3516, 0.4364 -1.22
BXD11 m 0.4161 0.03041   2   0.0215 0.0731 0.3946, 0.4376 -0.8
BXD12 m 0.4692 0.03185   5 0.01425 0.0679 0.417, 0.502 -0.11
BXD16 m 0.46965 0.02733   4 0.01366 0.0582 0.445, 0.494 -0.11
BXD2 m 0.4616 0.04076   3 0.02353 0.0883 0.4227, 0.504 -0.21
BXD27 m 0.47662 0.05706   5 0.02552 0.1197 0.4103, 0.5602 -0.02
BXD32 m 0.6709 0.09292   5 0.04155 0.1385 0.564, 0.764 2.49
BXD34 m 0.56703 0.02453   4 0.01227 0.0433 0.544, 0.5953 1.15
BXD39 m 0.44062 0.03962   4 0.01981 0.0899 0.384, 0.4689 -0.48
BXD40 m 0.35133 0.04821   3 0.02783 0.1372 0.323, 0.407 -1.63
BXD43 m 0.34237 0.03264   3 0.01885 0.0953 0.3084, 0.3735 -1.75
BXD44 m 0.38846 0.05148   9 0.01716 0.1325 0.313, 0.4831 -1.15
BXD45 m 0.5345 0.0506   5 0.02263 0.0947 0.4987, 0.6228 0.73
BXD48 m 0.37104 0.02708   5 0.01211 0.073 0.3361, 0.4065 -1.38
BXD48a m 0.44896 0.05149   5 0.02303 0.1147 0.4022, 0.527 -0.37
BXD49 m 0.51415 0.03369   4 0.01684 0.0655 0.477, 0.5498 0.47
BXD50 m 0.43375 0.05516   4 0.02758 0.1272 0.369, 0.496 -0.57
BXD51 m 0.52803 0.02363   3 0.01364 0.0448 0.5009, 0.5441 0.65
BXD53 m 0.5551 0.04731   5 0.02116 0.0852 0.5015, 0.626 0.99
BXD55 m 0.50094 0.03713   5 0.0166 0.0741 0.4715, 0.5599 0.3
BXD56 m 0.64797 0.09601   3 0.05543 0.1482 0.5372, 0.7073 2.19
BXD6 m 0.41526 0.01804   5 0.00806701 0.0434 0.3891, 0.4315 -0.81
BXD60 m 0.53837 0.01303   4 0.00651618 0.0242 0.5215, 0.5498 0.78
BXD61 m 0.47533 0.06683   3 0.03859 0.1406 0.413, 0.5459 -0.03
BXD62 m 0.46805 0.05651   4 0.02826 0.1207 0.4014, 0.5383 -0.13
BXD63 m 0.36237 0.04751   3 0.02743 0.1311 0.3163, 0.4112 -1.49
BXD64 m 0.42292 0.01191   4 0.00595334 0.0282 0.4068, 0.4334 -0.71
BXD65 m 0.50753 0.05229   4 0.02614 0.103 0.4605, 0.566 0.38
BXD65a m 0.56712 0.03536   5 0.01582 0.0624 0.5282, 0.622 1.15
BXD65b m 0.44505 0.00308707   4 0.00154353 0.0069 0.4411, 0.4477 -0.42
BXD66 m 0.56988 0.04557   5 0.02038 0.08 0.5359, 0.6453 1.18
BXD67 m 0.51534 0.03519   5 0.01574 0.0683 0.474, 0.553 0.48
BXD68 m 0.45063 0.07683   3 0.04436 0.1705 0.3816, 0.5334 -0.35
BXD69 m 0.55442 0.05052   5 0.02259 0.0911 0.5102, 0.6348 0.99
BXD70 m 0.5864 0.1657   3 0.09567 0.2826 0.4582, 0.7735 1.4
BXD71 m 0.45892 0.04885   4 0.02443 0.1065 0.3875, 0.4972 -0.25
BXD73 m 0.531 0.03481   3 0.0201 0.0656 0.4916, 0.5576 0.68
BXD73a m 0.49162 0.0777   5 0.03475 0.158 0.4264, 0.601 0.18
BXD73b m 0.49572 0.07906   5 0.03536 0.1595 0.3917, 0.6021 0.23
BXD75 m 0.54694 0.06117   5 0.02736 0.1118 0.4652, 0.608 0.89
BXD77 m 0.4566 0.04116   5 0.01841 0.0901 0.402, 0.492 -0.28
BXD79 m 0.50612 0.03969   5 0.01775 0.0784 0.4483, 0.5548 0.36
BXD8 m 0.43065 0.01341   4 0.00670504 0.0311 0.4153, 0.448 -0.61
BXD81 m 0.3847 0.06383   4 0.03192 0.1659 0.3062, 0.4488 -1.2
BXD83 m 0.4534 0.04241   3 0.02448 0.0935 0.4203, 0.5012 -0.32
BXD84 m 0.61587 0.06777   3 0.03913 0.11 0.5618, 0.6919 1.78
BXD85 m 0.41762 0.04065   5 0.01818 0.0973 0.3467, 0.45 -0.78
BXD87 m 0.35854 0.02659   5 0.01189 0.0742 0.3298, 0.402 -1.54
BXD89 m 0.42615 0.03237   4 0.01618 0.076 0.3951, 0.4628 -0.67
BXD90 m 0.45905 0.03062   4 0.01531 0.0667 0.415, 0.4822 -0.24
BXD95 m 0.45738 0.07115   4 0.03558 0.1556 0.401, 0.5613 -0.27
BXD98 m 0.52653 0.02003   4 0.01002 0.038 0.4973, 0.5398 0.63
BXD99 m 0.41674 0.02734   5 0.01223 0.0656 0.3852, 0.4579 -0.79
C57BL/6J m 0.37768 0.02036   5 0.00910332 0.0539 0.3518, 0.3958 -1.29
DBA/2J m 0.66623 0.03709   4 0.01855 0.0557 0.6308, 0.7116 2.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.49128 0.022205156 0.5350894525 0.4474705475
BXD100 m 0.4264333333 0.0286667331 0.4829910933 0.3698755734
BXD101 m 0.38335 0.0248261191 0.4323304569 0.3343695431
BXD11 m 0.4161 0.0351094343 0.4853688264 0.3468311736
BXD12 m 0.4692 0.022205156 0.5130094525 0.4253905475
BXD16 m 0.46965 0.0248261191 0.5186304569 0.4206695431
BXD2 m 0.4616 0.0286667331 0.5181577599 0.4050422401
BXD27 m 0.47662 0.022205156 0.5204294525 0.4328105475
BXD32 m 0.6709 0.022205156 0.7147094525 0.6270905475
BXD34 m 0.567025 0.0248261191 0.6160054569 0.5180445431
BXD39 m 0.440625 0.0248261191 0.4896054569 0.3916445431
BXD40 m 0.3513333333 0.0286667331 0.4078910933 0.2947755734
BXD43 m 0.3423666667 0.0286667331 0.3989244266 0.2858089067
BXD44 m 0.3884555556 0.0165507461 0.4211091935 0.3558019176
BXD45 m 0.5345 0.022205156 0.5783094525 0.4906905475
BXD48 m 0.37104 0.022205156 0.4148494525 0.3272305475
BXD48a m 0.44896 0.022205156 0.4927694525 0.4051505475
BXD49 m 0.51415 0.0248261191 0.5631304569 0.4651695431
BXD50 m 0.43375 0.0248261191 0.4827304569 0.3847695431
BXD51 m 0.5280333333 0.0286667331 0.5845910933 0.4714755734
BXD53 m 0.5551 0.022205156 0.5989094525 0.5112905475
BXD55 m 0.50094 0.022205156 0.5447494525 0.4571305475
BXD56 m 0.6479666667 0.0286667331 0.7045244266 0.5914089067
BXD6 m 0.41526 0.022205156 0.4590694525 0.3714505475
BXD60 m 0.538375 0.0248261191 0.5873554569 0.4893945431
BXD61 m 0.4753333333 0.0286667331 0.5318910933 0.4187755734
BXD62 m 0.46805 0.0248261191 0.5170304569 0.4190695431
BXD63 m 0.3623666667 0.0286667331 0.4189244266 0.3058089067
BXD64 m 0.422925 0.0248261191 0.4719054569 0.3739445431
BXD65 m 0.507525 0.0248261191 0.5565054569 0.4585445431
BXD65a m 0.56712 0.022205156 0.6109294525 0.5233105475
BXD65b m 0.44505 0.0248261191 0.4940304569 0.3960695431
BXD66 m 0.56988 0.022205156 0.6136894525 0.5260705475
BXD67 m 0.51534 0.022205156 0.5591494525 0.4715305475
BXD68 m 0.4506333333 0.0286667331 0.5071910933 0.3940755734
BXD69 m 0.55442 0.022205156 0.5982294525 0.5106105475
BXD70 m 0.5864 0.0286667331 0.6429577599 0.5298422401
BXD71 m 0.458925 0.0248261191 0.5079054569 0.4099445431
BXD73 m 0.531 0.0286667331 0.5875577599 0.4744422401
BXD73a m 0.49162 0.022205156 0.5354294525 0.4478105475
BXD73b m 0.49572 0.022205156 0.5395294525 0.4519105475
BXD75 m 0.54694 0.022205156 0.5907494525 0.5031305475
BXD77 m 0.4566 0.022205156 0.5004094525 0.4127905475
BXD79 m 0.50612 0.022205156 0.5499294525 0.4623105475
BXD8 m 0.43065 0.0248261191 0.4796304569 0.3816695431
BXD81 m 0.3847 0.0248261191 0.4336804569 0.3357195431
BXD83 m 0.4534 0.0286667331 0.5099577599 0.3968422401
BXD84 m 0.6158666667 0.0286667331 0.6724244266 0.5593089067
BXD85 m 0.41762 0.022205156 0.4614294525 0.3738105475
BXD87 m 0.35854 0.022205156 0.4023494525 0.3147305475
BXD89 m 0.42615 0.0248261191 0.4751304569 0.3771695431
BXD90 m 0.45905 0.0248261191 0.5080304569 0.4100695431
BXD95 m 0.457375 0.0248261191 0.5063554569 0.4083945431
BXD98 m 0.526525 0.0248261191 0.5755054569 0.4775445431
BXD99 m 0.41674 0.022205156 0.4605494525 0.3729305475
C57BL/6J m 0.37768 0.022205156 0.4214894525 0.3338705475
DBA/2J m 0.666225 0.0248261191 0.7152054569 0.6172445431




  GWAS USING LINEAR MIXED MODELS