Project measure / variable:   Auwerx1   hct_CD

ID, description, units MPD:111394   hct_CD   hematocrit (HCT)   [%]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   29 strains     sex: m     age: 29wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Auwerx1 - hematocrit (HCT) CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested29 strains
Mean of the strain means45.79   %
Median of the strain means45.4   %
SD of the strain means± 3.3924
Coefficient of variation (CV)0.0741
Min–max range of strain means39.733   –   55.0   %
Mean sample size per strain3.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 28 1087.0758 38.8241 4.6965 < 0.0001
Residuals 75 619.9982 8.2666


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100 m 46.95 0.21213   2   0.15 0.0045 46.8, 47.1 0.34
BXD101 m 51.0 2.2331   4 1.1165 0.0438 47.8, 52.8 1.54
BXD43 m 45.667 1.4742   3 0.85114 0.0323 44.0, 46.8 -0.04
BXD48 m 42.64 1.161   5 0.51923 0.0272 40.6, 43.4 -0.93
BXD48a m 44.325 1.9207   4 0.96036 0.0433 42.0, 46.7 -0.43
BXD49 m 43.7 2.0817   4 1.0408 0.0476 41.4, 46.0 -0.62
BXD50 m 51.55 1.8502   4 0.92511 0.0359 49.2, 53.6 1.7
BXD60 m 43.75 3.8891   2   2.75 0.0889 41.0, 46.5 -0.6
BXD63 m 47.667 2.1008   3 1.2129 0.0441 45.6, 49.8 0.55
BXD64 m 40.067 1.4048   3 0.81104 0.0351 38.6, 41.4 -1.69
BXD65 m 47.75 0.91469   4 0.45735 0.0192 46.6, 48.8 0.58
BXD65b m 41.867 3.8436   3 2.2191 0.0918 38.4, 46.0 -1.16
BXD66 m 48.86 3.4385   5 1.5377 0.0704 44.5, 53.9 0.9
BXD68 m 55.0 7.7872   3 4.4959 0.1416 49.0, 63.8 2.71
BXD69 m 41.7 1.6207   4 0.81035 0.0389 39.4, 43.2 -1.21
BXD71 m 45.4 3.1958   4 1.5979 0.0704 41.6, 48.6 -0.12
BXD73a m 47.2 2.5846   4 1.2923 0.0548 44.9, 50.9 0.42
BXD73b m 44.68 2.352   5 1.0519 0.0526 42.0, 47.4 -0.33
BXD79 m 48.445 1.6334   2   1.155 0.0337 47.29, 49.6 0.78
BXD81 m 47.5 1.4652   4 0.73258 0.0308 45.8, 49.0 0.5
BXD84 m 47.7 4.6669   2   3.3 0.0978 44.4, 51.0 0.56
BXD85 m 45.1 1.7701   4 0.88506 0.0392 43.2, 46.8 -0.2
BXD89 m 42.5 4.9497   2   3.5 0.1165 39.0, 46.0 -0.97
BXD90 m 46.2 0.71181   4 0.3559 0.0154 45.6, 47.0 0.12
BXD95 m 39.733 5.5185   3 3.1861 0.1389 35.6, 46.0 -1.79
BXD98 m 45.023 4.4692   3 2.5803 0.0993 40.67, 49.6 -0.23
BXD99 m 44.16 2.447   5 1.0943 0.0554 40.8, 46.6 -0.48
C57BL/6J m 47.48 3.3789   5 1.5111 0.0712 42.4, 51.2 0.5
DBA/2J m 44.3 2.2301   4 1.115 0.0503 41.4, 46.8 -0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 m 46.95 2.0330570577 51.0000573439 42.8999426561
BXD101 m 51.0 1.4375884321 53.8638230121 48.1361769879
BXD43 m 45.6666666667 1.6599841365 48.9735246405 42.3598086928
BXD48 m 42.64 1.2858181831 45.2014811722 40.0785188278
BXD48a m 44.325 1.4375884321 47.1888230121 41.4611769879
BXD49 m 43.7 1.4375884321 46.5638230121 40.8361769879
BXD50 m 51.55 1.4375884321 54.4138230121 48.6861769879
BXD60 m 43.75 2.0330570577 47.8000573439 39.6999426561
BXD63 m 47.6666666667 1.6599841365 50.9735246405 44.3598086928
BXD64 m 40.0666666667 1.6599841365 43.3735246405 36.7598086928
BXD65 m 47.75 1.4375884321 50.6138230121 44.8861769879
BXD65b m 41.8666666667 1.6599841365 45.1735246405 38.5598086928
BXD66 m 48.86 1.2858181831 51.4214811722 46.2985188278
BXD68 m 55.0 1.6599841365 58.3068579739 51.6931420261
BXD69 m 41.7 1.4375884321 44.5638230121 38.8361769879
BXD71 m 45.4 1.4375884321 48.2638230121 42.5361769879
BXD73a m 47.2 1.4375884321 50.0638230121 44.3361769879
BXD73b m 44.68 1.2858181831 47.2414811722 42.1185188278
BXD79 m 48.445 2.0330570577 52.4950573439 44.3949426561
BXD81 m 47.5 1.4375884321 50.3638230121 44.6361769879
BXD84 m 47.7 2.0330570577 51.7500573439 43.6499426561
BXD85 m 45.1 1.4375884321 47.9638230121 42.2361769879
BXD89 m 42.5 2.0330570577 46.5500573439 38.4499426561
BXD90 m 46.2 1.4375884321 49.0638230121 43.3361769879
BXD95 m 39.7333333333 1.6599841365 43.0401913072 36.4264753595
BXD98 m 45.0233333333 1.6599841365 48.3301913072 41.7164753595
BXD99 m 44.16 1.2858181831 46.7214811722 41.5985188278
C57BL/6J m 47.48 1.2858181831 50.0414811722 44.9185188278
DBA/2J m 44.3 1.4375884321 47.1638230121 41.4361769879




  GWAS USING LINEAR MIXED MODELS