Project measure / variable:   Auwerx1   ltm_25wks_HFD

ID, description, units MPD:111329   ltm_25wks_HFD   lean tissue mass, 25 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   52 strains     sex: m     age: 25wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - lean tissue mass, 25 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means27.161   g
Median of the strain means27.058   g
SD of the strain means± 2.4884
Coefficient of variation (CV)0.0916
Min–max range of strain means20.85   –   33.284   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 51 1359.0962 26.6489 10.8205 < 0.0001
Residuals 174 428.5324 2.4628


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 25.531 1.0294   5 0.46035 0.0403 23.847, 26.63 -0.66
BXD100 m 30.186 2.4572   5 1.0989 0.0814 27.48, 33.747 1.22
BXD101 m 27.23 0.86884   4 0.43442 0.0319 26.071, 28.025 0.03
BXD11 m 29.833 1.6386   5 0.73282 0.0549 27.926, 31.373 1.07
BXD12 m 25.026 1.0316   5 0.46135 0.0412 24.132, 26.729 -0.86
BXD16 m 33.284 2.0506   5 0.91706 0.0616 31.021, 35.249 2.46
BXD2 m 27.33 2.8849   5 1.2902 0.1056 23.318, 30.267 0.07
BXD27 m 25.562 1.0628   4 0.53139 0.0416 24.783, 27.127 -0.64
BXD32 m 29.803 2.7739   3 1.6015 0.0931 27.166, 32.696 1.06
BXD34 m 27.542 1.1296   5 0.50517 0.041 26.421, 29.4 0.15
BXD39 m 27.576 1.0079   5 0.45074 0.0365 26.505, 29.043 0.17
BXD40 m 20.85 1.2689   4 0.63443 0.0609 19.1, 22.1 -2.54
BXD43 m 27.756 1.8426   3 1.0638 0.0664 26.596, 29.881 0.24
BXD44 m 25.269 1.9769   4 0.98844 0.0782 22.696, 27.497 -0.76
BXD48 m 26.964 2.1804   5 0.97509 0.0809 25.08, 30.12 -0.08
BXD48a m 31.713 2.1509   3 1.2418 0.0678 29.691, 33.973 1.83
BXD49 m 30.853 1.6988   5 0.75973 0.0551 28.11, 32.298 1.48
BXD50 m 26.174 0.39274   5 0.17564 0.015 25.478, 26.406 -0.4
BXD53 m 30.066 1.5609   5 0.69806 0.0519 28.322, 31.698 1.17
BXD56 m 29.486 1.4404   2   1.0185 0.0489 28.467, 30.504 0.93
BXD6 m 27.541 1.6126   5 0.72119 0.0586 25.512, 29.738 0.15
BXD60 m 27.956 1.8934   5 0.84675 0.0677 24.981, 29.733 0.32
BXD61 m 29.356 0.30857   5 0.138 0.0105 28.893, 29.592 0.88
BXD62 m 25.313 1.3721   4 0.68604 0.0542 23.326, 26.449 -0.74
BXD63 m 26.152 1.1377   2   0.8045 0.0435 25.348, 26.957 -0.41
BXD64 m 25.767 0.9671   4 0.48355 0.0375 24.871, 26.787 -0.56
BXD65 m 29.044 1.4448   4 0.7224 0.0497 27.462, 30.963 0.76
BXD65a m 29.17 1.5882   4 0.79408 0.0544 27.92, 31.42 0.81
BXD66 m 25.453 1.1927   5 0.53338 0.0469 24.24, 27.224 -0.69
BXD67 m 25.238 0.89883   5 0.40197 0.0356 23.853, 26.21 -0.77
BXD68 m 24.524 1.1225   4 0.56123 0.0458 23.346, 25.965 -1.06
BXD69 m 23.5 1.1315   5 0.50602 0.0481 21.571, 24.462 -1.47
BXD70 m 26.997 3.4064   4 1.7032 0.1262 22.419, 30.661 -0.07
BXD71 m 29.896 1.2303   3 0.71031 0.0412 28.917, 31.277 1.1
BXD73a m 26.436 0.65316   4 0.32658 0.0247 25.832, 27.203 -0.29
BXD73b m 27.251 1.0339   5 0.46237 0.0379 26.077, 28.199 0.04
BXD75 m 24.029 0.20185   5 0.09027 0.0084 23.73, 24.282 -1.26
BXD77 m 24.242 1.7953   5 0.8029 0.0741 22.17, 26.05 -1.17
BXD79 m 28.483 1.4888   5 0.66583 0.0523 26.065, 29.99 0.53
BXD8 m 24.327 1.292   5 0.57781 0.0531 22.109, 25.485 -1.14
BXD81 m 24.138 1.5095   4 0.75477 0.0625 21.938, 25.133 -1.21
BXD83 m 23.849 1.9652   4 0.98262 0.0824 21.155, 25.808 -1.33
BXD84 m 28.608 2.3844   3 1.3766 0.0833 26.57, 31.23 0.58
BXD85 m 32.018 1.032   4 0.51602 0.0322 31.19, 33.525 1.95
BXD87 m 23.481 0.39573   4 0.19787 0.0169 22.894, 23.726 -1.48
BXD89 m 27.119 1.3646   4 0.68229 0.0503 25.887, 28.923 -0.02
BXD90 m 26.13 1.8288   4 0.91441 0.07 24.444, 28.371 -0.41
BXD95 m 28.895 2.1957   5 0.98193 0.076 26.767, 31.305 0.7
BXD98 m 29.402 0.74769   5 0.33438 0.0254 28.6, 30.429 0.9
BXD99 m 26.454 0.97671   5 0.4368 0.0369 25.187, 27.729 -0.28
C57BL/6J m 26.632 1.8777   4 0.93884 0.0705 24.687, 29.2 -0.21
DBA/2J m 26.938 1.1962   5 0.53495 0.0444 25.542, 28.598 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 25.5308 0.7018304412 26.915996734 24.145603266
BXD100 m 30.1864 0.7018304412 31.571596734 28.801203266
BXD101 m 27.23 0.7846702876 28.7786970297 25.6813029703
BXD11 m 29.8326 0.7018304412 31.217796734 28.447403266
BXD12 m 25.0262 0.7018304412 26.411396734 23.641003266
BXD16 m 33.2844 0.7018304412 34.669596734 31.899203266
BXD2 m 27.33 0.7018304412 28.715196734 25.944803266
BXD27 m 25.5625 0.7846702876 27.1111970297 24.0138029703
BXD32 m 29.8026666667 0.9060592036 31.5909479607 28.0143853727
BXD34 m 27.542 0.7018304412 28.927196734 26.156803266
BXD39 m 27.576 0.7018304412 28.961196734 26.190803266
BXD40 m 20.85 0.7846702876 22.3986970297 19.3013029703
BXD43 m 27.7563333333 0.9060592036 29.5446146273 25.9680520393
BXD44 m 25.26925 0.7846702876 26.8179470297 23.7205529703
BXD48 m 26.9638 0.7018304412 28.348996734 25.578603266
BXD48a m 31.713 0.9060592036 33.501281294 29.924718706
BXD49 m 30.8532 0.7018304412 32.238396734 29.468003266
BXD50 m 26.1736 0.7018304412 27.558796734 24.788403266
BXD53 m 30.066 0.7018304412 31.451196734 28.680803266
BXD56 m 29.4855 1.1096913627 31.6756883434 27.2953116566
BXD6 m 27.5414 0.7018304412 28.926596734 26.156203266
BXD60 m 27.9556 0.7018304412 29.340796734 26.570403266
BXD61 m 29.3564 0.7018304412 30.741596734 27.971203266
BXD62 m 25.313 0.7846702876 26.8616970297 23.7643029703
BXD63 m 26.1525 1.1096913627 28.3426883434 23.9623116566
BXD64 m 25.767 0.7846702876 27.3156970297 24.2183029703
BXD65 m 29.0445 0.7846702876 30.5931970297 27.4958029703
BXD65a m 29.17 0.7846702876 30.7186970297 27.6213029703
BXD66 m 25.4526 0.7018304412 26.837796734 24.067403266
BXD67 m 25.2378 0.7018304412 26.622996734 23.852603266
BXD68 m 24.52425 0.7846702876 26.0729470297 22.9755529703
BXD69 m 23.4998 0.7018304412 24.884996734 22.114603266
BXD70 m 26.997 0.7846702876 28.5456970297 25.4483029703
BXD71 m 29.896 0.9060592036 31.684281294 28.107718706
BXD73a m 26.43625 0.7846702876 27.9849470297 24.8875529703
BXD73b m 27.251 0.7018304412 28.636196734 25.865803266
BXD75 m 24.0294 0.7018304412 25.414596734 22.644203266
BXD77 m 24.242 0.7018304412 25.627196734 22.856803266
BXD79 m 28.4828 0.7018304412 29.867996734 27.097603266
BXD8 m 24.3274 0.7018304412 25.712596734 22.942203266
BXD81 m 24.13775 0.7846702876 25.6864470297 22.5890529703
BXD83 m 23.84925 0.7846702876 25.3979470297 22.3005529703
BXD84 m 28.6076666667 0.9060592036 30.3959479607 26.8193853727
BXD85 m 32.01775 0.7846702876 33.5664470297 30.4690529703
BXD87 m 23.48075 0.7846702876 25.0294470297 21.9320529703
BXD89 m 27.11925 0.7846702876 28.6679470297 25.5705529703
BXD90 m 26.1295 0.7846702876 27.6781970297 24.5808029703
BXD95 m 28.8952 0.7018304412 30.280396734 27.510003266
BXD98 m 29.4016 0.7018304412 30.786796734 28.016403266
BXD99 m 26.4542 0.7018304412 27.839396734 25.069003266
C57BL/6J m 26.63175 0.7846702876 28.1804470297 25.0830529703
DBA/2J m 26.9376 0.7018304412 28.322796734 25.552403266




  GWAS USING LINEAR MIXED MODELS