Project measure / variable:   Auwerx1   ftm_25wks_CD

ID, description, units MPD:111326   ftm_25wks_CD   fat tissue mass, 25 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   53 strains     sex: m     age: 25wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - fat tissue mass, 25 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested53 strains
Mean of the strain means6.7922   g
Median of the strain means5.5125   g
SD of the strain means± 3.9618
Coefficient of variation (CV)0.5833
Min–max range of strain means1.998   –   17.778   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 52 3450.8385 66.3623 12.7625 < 0.0001
Residuals 169 878.7671 5.1998


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 2.9866 1.4593   5 0.6526 0.4886 1.715, 5.379 -0.96
BXD100 m 7.6153 5.6626   3 3.2693 0.7436 4.249, 14.153 0.21
BXD101 m 5.1863 1.7079   4 0.85397 0.3293 3.736, 7.464 -0.41
BXD11 m 5.5125 2.0301   2   1.4355 0.3683 4.077, 6.948 -0.32
BXD12 m 2.8334 0.53384   5 0.23874 0.1884 2.226, 3.613 -1.0
BXD16 m 17.778 2.3374   4 1.1687 0.1315 15.851, 21.166 2.77
BXD2 m 8.614 2.3625   4 1.1813 0.2743 5.096, 10.151 0.46
BXD27 m 4.0388 3.1748   5 1.4198 0.7861 1.538, 9.254 -0.69
BXD32 m 6.0 3.1883   5 1.4258 0.5314 2.9, 10.8 -0.2
BXD34 m 6.3703 0.95194   4 0.47597 0.1494 4.987, 7.141 -0.11
BXD39 m 15.047 1.4456   5 0.6465 0.0961 14.048, 17.541 2.08
BXD40 m 2.3387 0.3477   3 0.20074 0.1487 1.967, 2.656 -1.12
BXD43 m 3.065 2.1544   3 1.2439 0.7029 1.705, 5.549 -0.94
BXD44 m 9.1282 1.5218   4 0.76092 0.1667 7.938, 11.28 0.59
BXD48 m 7.5634 2.336   5 1.0447 0.3088 6.026, 11.674 0.19
BXD48a m 8.1967 2.3832   4 1.1916 0.2907 6.427, 11.703 0.35
BXD49 m 6.564 0.70871   4 0.35435 0.108 5.835, 7.495 -0.06
BXD50 m 6.1542 2.3698   4 1.1849 0.3851 2.643, 7.819 -0.16
BXD53 m 3.7234 2.3689   5 1.0594 0.6362 1.802, 7.572 -0.77
BXD56 m 2.384 0.69722   3 0.40254 0.2925 1.772, 3.143 -1.11
BXD6 m 5.5628 1.7476   5 0.78155 0.3142 3.63, 7.427 -0.31
BXD60 m 9.4404 4.1693   5 1.8646 0.4416 2.764, 14.211 0.67
BXD61 m 3.361 0.8158   3 0.471 0.2427 2.889, 4.303 -0.87
BXD62 m 4.353 0.91393   4 0.45697 0.21 3.06, 5.09 -0.62
BXD63 m 7.4307 2.9584   4 1.4792 0.3981 4.529, 11.552 0.16
BXD64 m 5.4697 0.93124   4 0.46562 0.1703 4.426, 6.3 -0.33
BXD65 m 15.106 1.4083   4 0.70416 0.0932 13.329, 16.599 2.1
BXD65a m 8.5558 2.8326   5 1.2668 0.3311 6.905, 13.59 0.45
BXD65b m 15.956 0.97627   4 0.48813 0.0612 14.572, 16.863 2.31
BXD66 m 14.596 5.0115   5 2.2412 0.3433 8.644, 20.862 1.97
BXD67 m 9.6172 5.0819   5 2.2727 0.5284 4.734, 16.552 0.71
BXD68 m 5.3287 2.2154   3 1.2791 0.4158 2.83, 7.053 -0.37
BXD69 m 10.31 1.4798   5 0.66178 0.1435 7.963, 12.011 0.89
BXD70 m 3.7483 3.5152   4 1.7576 0.9378 1.409, 8.983 -0.77
BXD71 m 5.2742 1.4598   5 0.65284 0.2768 4.116, 7.796 -0.38
BXD73a m 12.57 2.1114   4 1.0557 0.168 10.81, 15.629 1.46
BXD73b m 10.258 3.1256   5 1.3978 0.3047 7.198, 14.207 0.87
BXD75 m 5.343 2.0119   5 0.89975 0.3765 3.441, 8.768 -0.37
BXD77 m 4.8 1.6688   5 0.74632 0.3477 2.1, 6.2 -0.5
BXD79 m 9.0252 1.504   5 0.67261 0.1666 6.693, 10.584 0.56
BXD8 m 2.766 0.10469   4 0.05235 0.0379 2.615, 2.841 -1.02
BXD81 m 3.4352 1.8286   4 0.91431 0.5323 1.505, 5.778 -0.85
BXD83 m 3.9823 1.0457   3 0.60374 0.2626 3.069, 5.123 -0.71
BXD84 m 2.9725 0.20117   4 0.10058 0.0677 2.687, 3.127 -0.96
BXD85 m 12.816 1.3993   5 0.62577 0.1092 11.444, 14.295 1.52
BXD87 m 2.887 0.51693   4 0.25847 0.1791 2.248, 3.501 -0.99
BXD89 m 10.365 1.3328   4 0.66642 0.1286 8.699, 11.921 0.9
BXD90 m 3.4472 0.32466   4 0.16233 0.0942 3.027, 3.737 -0.84
BXD95 m 3.4903 1.7641   4 0.88207 0.5054 1.759, 5.911 -0.83
BXD98 m 6.309 1.9929   4 0.99643 0.3159 3.345, 7.537 -0.12
BXD99 m 4.0302 0.71993   5 0.32196 0.1786 3.07, 4.912 -0.7
C57BL/6J m 1.998 0.56856   4 0.28428 0.2846 1.558, 2.794 -1.21
DBA/2J m 4.2807 1.8367   3 1.0604 0.4291 2.21, 5.713 -0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 2.9866 1.0197848015 4.9997576328 0.9734423672
BXD100 m 7.6153333333 1.3165365176 10.2143086617 5.016358005
BXD101 m 5.18625 1.1401540692 7.4370286582 2.9354713418
BXD11 m 5.5125 1.6124213479 8.6955817043 2.3294182957
BXD12 m 2.8334 1.0197848015 4.8465576328 0.8202423672
BXD16 m 17.77825 1.1401540692 20.0290286582 15.5274713418
BXD2 m 8.614 1.1401540692 10.8647786582 6.3632213418
BXD27 m 4.0388 1.0197848015 6.0519576328 2.0256423672
BXD32 m 6.0 1.0197848015 8.0131576328 3.9868423672
BXD34 m 6.37025 1.1401540692 8.6210286582 4.1194713418
BXD39 m 15.0472 1.0197848015 17.0603576328 13.0340423672
BXD40 m 2.3386666667 1.3165365176 4.937641995 -0.2603086617
BXD43 m 3.065 1.3165365176 5.6639753284 0.4660246716
BXD44 m 9.12825 1.1401540692 11.3790286582 6.8774713418
BXD48 m 7.5634 1.0197848015 9.5765576328 5.5502423672
BXD48a m 8.19675 1.1401540692 10.4475286582 5.9459713418
BXD49 m 6.564 1.1401540692 8.8147786582 4.3132213418
BXD50 m 6.15425 1.1401540692 8.4050286582 3.9034713418
BXD53 m 3.7234 1.0197848015 5.7365576328 1.7102423672
BXD56 m 2.384 1.3165365176 4.9829753284 -0.2149753284
BXD6 m 5.5628 1.0197848015 7.5759576328 3.5496423672
BXD60 m 9.4404 1.0197848015 11.4535576328 7.4272423672
BXD61 m 3.361 1.3165365176 5.9599753284 0.7620246716
BXD62 m 4.353 1.1401540692 6.6037786582 2.1022213418
BXD63 m 7.43075 1.1401540692 9.6815286582 5.1799713418
BXD64 m 5.46975 1.1401540692 7.7205286582 3.2189713418
BXD65 m 15.10575 1.1401540692 17.3565286582 12.8549713418
BXD65a m 8.5558 1.0197848015 10.5689576328 6.5426423672
BXD65b m 15.95625 1.1401540692 18.2070286582 13.7054713418
BXD66 m 14.596 1.0197848015 16.6091576328 12.5828423672
BXD67 m 9.6172 1.0197848015 11.6303576328 7.6040423672
BXD68 m 5.3286666667 1.3165365176 7.927641995 2.7296913383
BXD69 m 10.3096 1.0197848015 12.3227576328 8.2964423672
BXD70 m 3.74825 1.1401540692 5.9990286582 1.4974713418
BXD71 m 5.2742 1.0197848015 7.2873576328 3.2610423672
BXD73a m 12.5705 1.1401540692 14.8212786582 10.3197213418
BXD73b m 10.2576 1.0197848015 12.2707576328 8.2444423672
BXD75 m 5.343 1.0197848015 7.3561576328 3.3298423672
BXD77 m 4.8 1.0197848015 6.8131576328 2.7868423672
BXD79 m 9.0252 1.0197848015 11.0383576328 7.0120423672
BXD8 m 2.766 1.1401540692 5.0167786582 0.5152213418
BXD81 m 3.43525 1.1401540692 5.6860286582 1.1844713418
BXD83 m 3.9823333333 1.3165365176 6.5813086617 1.383358005
BXD84 m 2.9725 1.1401540692 5.2232786582 0.7217213418
BXD85 m 12.816 1.0197848015 14.8291576328 10.8028423672
BXD87 m 2.887 1.1401540692 5.1377786582 0.6362213418
BXD89 m 10.36525 1.1401540692 12.6160286582 8.1144713418
BXD90 m 3.44725 1.1401540692 5.6980286582 1.1964713418
BXD95 m 3.49025 1.1401540692 5.7410286582 1.2394713418
BXD98 m 6.309 1.1401540692 8.5597786582 4.0582213418
BXD99 m 4.0302 1.0197848015 6.0433576328 2.0170423672
C57BL/6J m 1.998 1.1401540692 4.2487786582 -0.2527786582
DBA/2J m 4.2806666667 1.3165365176 6.879641995 1.6816913383




  GWAS USING LINEAR MIXED MODELS