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Project measure / variable:   Auwerx1   rer_max_treadmill1_HFD

ID, description, units MPD:111319   rer_max_treadmill1_HFD   maximum respiratory exchange ratio (RER), first treadmill training (VCO2:VO2)   [ratio]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   55 strains     sex: m     age: 23wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Auwerx1 - maximum respiratory exchange ratio (RER), first treadmill training (VCO2:VO2) HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested55 strains
Mean of the strain means0.93141   ratio
Median of the strain means0.93325   ratio
SD of the strain means± 0.03532
Coefficient of variation (CV)0.0379
Min–max range of strain means0.838   –   0.99167   ratio
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 54 0.3072 0.0057 5.8072 < 0.0001
Residuals 186 0.1822 0.001


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.838 0.01478   5 0.0066106 0.0176 0.818, 0.855 -2.64
BXD100 m 0.9416 0.05309   5 0.02374 0.0564 0.86, 1.005 0.29
BXD101 m 0.95725 0.02007   4 0.01004 0.021 0.929, 0.975 0.73
BXD11 m 0.896 0.01681   5 0.00751665 0.0188 0.868, 0.911 -1.0
BXD12 m 0.8992 0.03176   5 0.0142 0.0353 0.872, 0.948 -0.91
BXD16 m 0.9236 0.04257   5 0.01904 0.0461 0.863, 0.966 -0.22
BXD2 m 0.892 0.03452   5 0.01544 0.0387 0.85, 0.92 -1.12
BXD27 m 0.93567 0.00896289   3 0.00517472 0.0096 0.93, 0.946 0.12
BXD32 m 0.96067 0.03539   3 0.02043 0.0368 0.921, 0.989 0.83
BXD34 m 0.8554 0.0139   5 0.00621772 0.0163 0.842, 0.873 -2.15
BXD39 m 0.8576 0.00901665   5 0.00403237 0.0105 0.846, 0.867 -2.09
BXD40 m 0.9035 0.02958   4 0.01479 0.0327 0.865, 0.934 -0.79
BXD43 m 0.91533 0.02702   3 0.0156 0.0295 0.889, 0.943 -0.46
BXD44 m 0.93378 0.04167   9 0.01389 0.0446 0.886, 1.0 0.07
BXD45 m 0.941 0.02997   4 0.01498 0.0318 0.899, 0.97 0.27
BXD48 m 0.9136 0.01771   5 0.00792212 0.0194 0.891, 0.936 -0.5
BXD48a m 0.90833 0.02631   3 0.01519 0.029 0.878, 0.925 -0.65
BXD49 m 0.9625 0.03225   4 0.01613 0.0335 0.932, 1.007 0.88
BXD50 m 0.9898 0.02086   5 0.00932952 0.0211 0.958, 1.012 1.65
BXD51 m 0.909 0.02242   4 0.01121 0.0247 0.882, 0.932 -0.63
BXD53 m 0.8822 0.0307   5 0.01373 0.0348 0.834, 0.906 -1.39
BXD55 m 0.90825 0.03633   4 0.01816 0.04 0.863, 0.941 -0.66
BXD56 m 0.93067 0.03647   3 0.02106 0.0392 0.9, 0.971 -0.02
BXD6 m 0.9076 0.02699   5 0.01207 0.0297 0.875, 0.946 -0.67
BXD61 m 0.9728 0.02813   5 0.01258 0.0289 0.942, 1.017 1.17
BXD62 m 0.9565 0.03918   4 0.01959 0.041 0.9, 0.987 0.71
BXD63 m 0.928 0.01414   2   0.01 0.0152 0.918, 0.938 -0.1
BXD64 m 0.945 0.03176   4 0.01588 0.0336 0.922, 0.992 0.38
BXD65 m 0.959 0.02617   4 0.01308 0.0273 0.937, 0.992 0.78
BXD65a m 0.93325 0.03051   4 0.01526 0.0327 0.894, 0.967 0.05
BXD66 m 0.9836 0.02723   5 0.01218 0.0277 0.96, 1.023 1.48
BXD67 m 0.8714 0.03611   5 0.01615 0.0414 0.822, 0.912 -1.7
BXD68 m 0.91175 0.02045   4 0.01023 0.0224 0.895, 0.941 -0.56
BXD69 m 0.9338 0.02398   5 0.01073 0.0257 0.907, 0.96 0.07
BXD70 m 0.98725 0.03788   4 0.01894 0.0384 0.931, 1.012 1.58
BXD71 m 0.966 0.09414   3 0.05435 0.0975 0.869, 1.057 0.98
BXD73 m 0.968 0.01575   4 0.00787401 0.0163 0.946, 0.982 1.04
BXD73a m 0.92675 0.03916   4 0.01958 0.0423 0.877, 0.969 -0.13
BXD73b m 0.9306 0.01627   5 0.00727736 0.0175 0.91, 0.944 -0.02
BXD75 m 0.9246 0.00658027   5 0.00294279 0.0071 0.914, 0.931 -0.19
BXD77 m 0.8896 0.0045607   5 0.00203961 0.0051 0.884, 0.894 -1.18
BXD79 m 0.894 0.01198   5 0.00535724 0.0134 0.874, 0.905 -1.06
BXD8 m 0.9088 0.02836   5 0.01268 0.0312 0.871, 0.937 -0.64
BXD81 m 0.97 0.05578   4 0.02789 0.0575 0.888, 1.013 1.09
BXD83 m 0.9585 0.03656   4 0.01828 0.0381 0.914, 1.001 0.77
BXD84 m 0.99167 0.07179   3 0.04145 0.0724 0.929, 1.07 1.71
BXD85 m 0.9405 0.01063   4 0.00531507 0.0113 0.929, 0.953 0.26
BXD87 m 0.97075 0.021   4 0.0105 0.0216 0.955, 1.0 1.11
BXD89 m 0.94375 0.02567   4 0.01283 0.0272 0.91, 0.967 0.35
BXD90 m 0.96125 0.03693   4 0.01846 0.0384 0.906, 0.982 0.84
BXD95 m 0.9328 0.03718   5 0.01663 0.0399 0.879, 0.964 0.04
BXD98 m 0.918 0.01398   5 0.006253 0.0152 0.904, 0.937 -0.38
BXD99 m 0.979 0.02433   5 0.01088 0.0249 0.959, 1.021 1.35
C57BL/6J m 0.96075 0.02268   4 0.01134 0.0236 0.94, 0.99 0.83
DBA/2J m 0.9472 0.02858   5 0.01278 0.0302 0.932, 0.998 0.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.838 0.0139975288 0.8656143264 0.8103856736
BXD100 m 0.9416 0.0139975288 0.9692143264 0.9139856736
BXD101 m 0.95725 0.015649713 0.9881237555 0.9263762445
BXD11 m 0.896 0.0139975288 0.9236143264 0.8683856736
BXD12 m 0.8992 0.0139975288 0.9268143264 0.8715856736
BXD16 m 0.9236 0.0139975288 0.9512143264 0.8959856736
BXD2 m 0.892 0.0139975288 0.9196143264 0.8643856736
BXD27 m 0.9356666667 0.018070732 0.9713166088 0.9000167246
BXD32 m 0.9606666667 0.018070732 0.9963166088 0.9250167246
BXD34 m 0.8554 0.0139975288 0.8830143264 0.8277856736
BXD39 m 0.8576 0.0139975288 0.8852143264 0.8299856736
BXD40 m 0.9035 0.015649713 0.9343737555 0.8726262445
BXD43 m 0.9153333333 0.018070732 0.9509832754 0.8796833912
BXD44 m 0.9337777778 0.010433142 0.9543602814 0.9131952741
BXD45 m 0.941 0.015649713 0.9718737555 0.9101262445
BXD48 m 0.9136 0.0139975288 0.9412143264 0.8859856736
BXD48a m 0.9083333333 0.018070732 0.9439832754 0.8726833912
BXD49 m 0.9625 0.015649713 0.9933737555 0.9316262445
BXD50 m 0.9898 0.0139975288 1.0174143264 0.9621856736
BXD51 m 0.909 0.015649713 0.9398737555 0.8781262445
BXD53 m 0.8822 0.0139975288 0.9098143264 0.8545856736
BXD55 m 0.90825 0.015649713 0.9391237555 0.8773762445
BXD56 m 0.9306666667 0.018070732 0.9663166088 0.8950167246
BXD6 m 0.9076 0.0139975288 0.9352143264 0.8799856736
BXD61 m 0.9728 0.0139975288 1.0004143264 0.9451856736
BXD62 m 0.9565 0.015649713 0.9873737555 0.9256262445
BXD63 m 0.928 0.0221320363 0.9716620837 0.8843379163
BXD64 m 0.945 0.015649713 0.9758737555 0.9141262445
BXD65 m 0.959 0.015649713 0.9898737555 0.9281262445
BXD65a m 0.93325 0.015649713 0.9641237555 0.9023762445
BXD66 m 0.9836 0.0139975288 1.0112143264 0.9559856736
BXD67 m 0.8714 0.0139975288 0.8990143264 0.8437856736
BXD68 m 0.91175 0.015649713 0.9426237555 0.8808762445
BXD69 m 0.9338 0.0139975288 0.9614143264 0.9061856736
BXD70 m 0.98725 0.015649713 1.0181237555 0.9563762445
BXD71 m 0.966 0.018070732 1.0016499421 0.9303500579
BXD73 m 0.968 0.015649713 0.9988737555 0.9371262445
BXD73a m 0.92675 0.015649713 0.9576237555 0.8958762445
BXD73b m 0.9306 0.0139975288 0.9582143264 0.9029856736
BXD75 m 0.9246 0.0139975288 0.9522143264 0.8969856736
BXD77 m 0.8896 0.0139975288 0.9172143264 0.8619856736
BXD79 m 0.894 0.0139975288 0.9216143264 0.8663856736
BXD8 m 0.9088 0.0139975288 0.9364143264 0.8811856736
BXD81 m 0.97 0.015649713 1.0008737555 0.9391262445
BXD83 m 0.9585 0.015649713 0.9893737555 0.9276262445
BXD84 m 0.9916666667 0.018070732 1.0273166088 0.9560167246
BXD85 m 0.9405 0.015649713 0.9713737555 0.9096262445
BXD87 m 0.97075 0.015649713 1.0016237555 0.9398762445
BXD89 m 0.94375 0.015649713 0.9746237555 0.9128762445
BXD90 m 0.96125 0.015649713 0.9921237555 0.9303762445
BXD95 m 0.9328 0.0139975288 0.9604143264 0.9051856736
BXD98 m 0.918 0.0139975288 0.9456143264 0.8903856736
BXD99 m 0.979 0.0139975288 1.0066143264 0.9513856736
C57BL/6J m 0.96075 0.015649713 0.9916237555 0.9298762445
DBA/2J m 0.9472 0.0139975288 0.9748143264 0.9195856736




  GWAS USING LINEAR MIXED MODELS