Project measure / variable:   Auwerx1   rer_basal_HFD

ID, description, units MPD:111311   rer_basal_HFD   basal respiratory exchange ratio (RER), prior to first treadmill training (VCO2:VO2), 15 min time period, last 2 min analyzed   [ratio]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   55 strains     sex: m     age: 23wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Auwerx1 - basal respiratory exchange ratio (RER), prior to first treadmill training (VCO2:VO2), 15 min time period, last 2 min analyzed HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested55 strains
Mean of the strain means0.7825   ratio
Median of the strain means0.78033   ratio
SD of the strain means± 0.02433
Coefficient of variation (CV)0.0311
Min–max range of strain means0.73705   –   0.909   ratio
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 54 0.1512 0.0028 7.3794 < 0.0001
Residuals 186 0.0706 0.0004


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.73705 0.01431   5 0.00639746 0.0194 0.727, 0.76225 -1.87
BXD100 m 0.8098 0.01677   5 0.00749933 0.0207 0.786, 0.83 1.12
BXD101 m 0.79775 0.0243   4 0.01215 0.0305 0.77, 0.821 0.63
BXD11 m 0.8022 0.01535   5 0.00686586 0.0191 0.781, 0.816 0.81
BXD12 m 0.7728 0.01916   5 0.00856971 0.0248 0.749, 0.798 -0.4
BXD16 m 0.7938 0.01139   5 0.00509313 0.0143 0.776, 0.803 0.46
BXD2 m 0.765 0.01969   5 0.00880341 0.0257 0.736, 0.787 -0.72
BXD27 m 0.76533 0.02515   3 0.01452 0.0329 0.737, 0.785 -0.71
BXD32 m 0.78033 0.02307   3 0.01332 0.0296 0.754, 0.797 -0.09
BXD34 m 0.7776 0.01006   5 0.00450111 0.0129 0.764, 0.791 -0.2
BXD39 m 0.789 0.0107   5 0.00478539 0.0136 0.777, 0.805 0.27
BXD40 m 0.74775 0.01124   4 0.00561805 0.015 0.737, 0.761 -1.43
BXD43 m 0.769 0.01952   3 0.01127 0.0254 0.749, 0.788 -0.55
BXD44 m 0.77333 0.03069   9 0.01023 0.0397 0.743, 0.848 -0.38
BXD45 m 0.774 0.01158   4 0.00579152 0.015 0.765, 0.7905 -0.35
BXD48 m 0.7706 0.01616   5 0.00722911 0.021 0.755, 0.798 -0.49
BXD48a m 0.76867 0.01674   3 0.00966667 0.0218 0.759, 0.788 -0.57
BXD49 m 0.7595 0.00714143   4 0.00357071 0.0094 0.75, 0.767 -0.95
BXD50 m 0.909 0.01351   5 0.00604152 0.0149 0.893, 0.925 5.2
BXD51 m 0.76635 0.00917006   4 0.00458503 0.012 0.753, 0.7734 -0.66
BXD53 m 0.7658 0.01062   5 0.00474763 0.0139 0.749, 0.776 -0.69
BXD55 m 0.821 0.05761   4 0.0288 0.0702 0.77, 0.9 1.58
BXD56 m 0.76967 0.0085049   3 0.00491031 0.0111 0.761, 0.778 -0.53
BXD6 m 0.7829 0.02459   5 0.011 0.0314 0.758, 0.821 0.02
BXD61 m 0.771 0.0186   5 0.00831865 0.0241 0.745, 0.79 -0.47
BXD62 m 0.78825 0.02551   4 0.01276 0.0324 0.76, 0.822 0.24
BXD63 m 0.7635 0.00212132   2   0.0015 0.0028 0.762, 0.765 -0.78
BXD64 m 0.7885 0.00723418   4 0.00361709 0.0092 0.782, 0.797 0.25
BXD65 m 0.78525 0.01969   4 0.00984357 0.0251 0.758, 0.805 0.11
BXD65a m 0.79625 0.00917878   4 0.00458939 0.0115 0.786, 0.807 0.57
BXD66 m 0.7928 0.00742967   5 0.00332265 0.0094 0.781, 0.799 0.42
BXD67 m 0.7592 0.00645755   5 0.00288791 0.0085 0.749, 0.766 -0.96
BXD68 m 0.77625 0.01072   4 0.00535996 0.0138 0.764, 0.789 -0.26
BXD69 m 0.7778 0.02069   5 0.00925419 0.0266 0.758, 0.81 -0.19
BXD70 m 0.7815 0.02138   4 0.01069 0.0274 0.763, 0.801 -0.04
BXD71 m 0.794 0.01572   3 0.00907377 0.0198 0.78, 0.811 0.47
BXD73 m 0.76019 0.01453   4 0.00726534 0.0191 0.74575, 0.7755 -0.92
BXD73a m 0.79375 0.02855   4 0.01427 0.036 0.762, 0.83 0.46
BXD73b m 0.7754 0.01176   5 0.00525928 0.0152 0.756, 0.785 -0.29
BXD75 m 0.7626 0.01519   5 0.00679412 0.0199 0.739, 0.776 -0.82
BXD77 m 0.7468 0.01669   5 0.00746592 0.0224 0.734, 0.767 -1.47
BXD79 m 0.79684 0.01002   5 0.00448092 0.0126 0.788, 0.813 0.59
BXD8 m 0.7864 0.01837   5 0.0082134 0.0234 0.762, 0.807 0.16
BXD81 m 0.78948 0.00751238   4 0.00375619 0.0095 0.78, 0.7979 0.29
BXD83 m 0.7885 0.02282   4 0.01141 0.0289 0.765, 0.818 0.25
BXD84 m 0.785 0.03897   3 0.0225 0.0496 0.75, 0.827 0.1
BXD85 m 0.7958 0.0125   4 0.00625193 0.0157 0.781, 0.8088 0.55
BXD87 m 0.79175 0.03834   4 0.01917 0.0484 0.76, 0.847 0.38
BXD89 m 0.7725 0.0163   4 0.00814964 0.0211 0.751, 0.789 -0.41
BXD90 m 0.80675 0.01271   4 0.00635577 0.0158 0.793, 0.819 1.0
BXD95 m 0.7659 0.01383   5 0.00618547 0.0181 0.747, 0.785 -0.68
BXD98 m 0.7986 0.01593   5 0.00712461 0.0199 0.782, 0.825 0.66
BXD99 m 0.8124 0.02364   5 0.01057 0.0291 0.78, 0.84 1.23
C57BL/6J m 0.76875 0.01696   4 0.00847914 0.0221 0.754, 0.788 -0.57
DBA/2J m 0.7976 0.0221   5 0.00988231 0.0277 0.773, 0.82 0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.73705 0.0087117957 0.7542366316 0.7198633684
BXD100 m 0.8098 0.0087117957 0.8269866316 0.7926133684
BXD101 m 0.79775 0.0097400837 0.8169652383 0.7785347617
BXD11 m 0.8022 0.0087117957 0.8193866316 0.7850133684
BXD12 m 0.7728 0.0087117957 0.7899866316 0.7556133684
BXD16 m 0.7938 0.0087117957 0.8109866316 0.7766133684
BXD2 m 0.765 0.0087117957 0.7821866316 0.7478133684
BXD27 m 0.7653333333 0.0112468799 0.7875211794 0.7431454873
BXD32 m 0.7803333333 0.0112468799 0.8025211794 0.7581454873
BXD34 m 0.7776 0.0087117957 0.7947866316 0.7604133684
BXD39 m 0.789 0.0087117957 0.8061866316 0.7718133684
BXD40 m 0.74775 0.0097400837 0.7669652383 0.7285347617
BXD43 m 0.769 0.0112468799 0.791187846 0.746812154
BXD44 m 0.7733333333 0.0064933892 0.7861434922 0.7605231745
BXD45 m 0.774 0.0097400837 0.7932152383 0.7547847617
BXD48 m 0.7706 0.0087117957 0.7877866316 0.7534133684
BXD48a m 0.7686666667 0.0112468799 0.7908545127 0.7464788206
BXD49 m 0.7595 0.0097400837 0.7787152383 0.7402847617
BXD50 m 0.909 0.0087117957 0.9261866316 0.8918133684
BXD51 m 0.76635 0.0097400837 0.7855652383 0.7471347617
BXD53 m 0.7658 0.0087117957 0.7829866316 0.7486133684
BXD55 m 0.821 0.0097400837 0.8402152383 0.8017847617
BXD56 m 0.7696666667 0.0112468799 0.7918545127 0.7474788206
BXD6 m 0.7829 0.0087117957 0.8000866316 0.7657133684
BXD61 m 0.771 0.0087117957 0.7881866316 0.7538133684
BXD62 m 0.78825 0.0097400837 0.8074652383 0.7690347617
BXD63 m 0.7635 0.0137745585 0.7906744506 0.7363255494
BXD64 m 0.7885 0.0097400837 0.8077152383 0.7692847617
BXD65 m 0.78525 0.0097400837 0.8044652383 0.7660347617
BXD65a m 0.79625 0.0097400837 0.8154652383 0.7770347617
BXD66 m 0.7928 0.0087117957 0.8099866316 0.7756133684
BXD67 m 0.7592 0.0087117957 0.7763866316 0.7420133684
BXD68 m 0.77625 0.0097400837 0.7954652383 0.7570347617
BXD69 m 0.7778 0.0087117957 0.7949866316 0.7606133684
BXD70 m 0.7815 0.0097400837 0.8007152383 0.7622847617
BXD71 m 0.794 0.0112468799 0.816187846 0.771812154
BXD73 m 0.7601875 0.0097400837 0.7794027383 0.7409722617
BXD73a m 0.79375 0.0097400837 0.8129652383 0.7745347617
BXD73b m 0.7754 0.0087117957 0.7925866316 0.7582133684
BXD75 m 0.7626 0.0087117957 0.7797866316 0.7454133684
BXD77 m 0.7468 0.0087117957 0.7639866316 0.7296133684
BXD79 m 0.79684 0.0087117957 0.8140266316 0.7796533684
BXD8 m 0.7864 0.0087117957 0.8035866316 0.7692133684
BXD81 m 0.789475 0.0097400837 0.8086902383 0.7702597617
BXD83 m 0.7885 0.0097400837 0.8077152383 0.7692847617
BXD84 m 0.785 0.0112468799 0.807187846 0.762812154
BXD85 m 0.7958 0.0097400837 0.8150152383 0.7765847617
BXD87 m 0.79175 0.0097400837 0.8109652383 0.7725347617
BXD89 m 0.7725 0.0097400837 0.7917152383 0.7532847617
BXD90 m 0.80675 0.0097400837 0.8259652383 0.7875347617
BXD95 m 0.7659 0.0087117957 0.7830866316 0.7487133684
BXD98 m 0.7986 0.0087117957 0.8157866316 0.7814133684
BXD99 m 0.8124 0.0087117957 0.8295866316 0.7952133684
C57BL/6J m 0.76875 0.0097400837 0.7879652383 0.7495347617
DBA/2J m 0.7976 0.0087117957 0.8147866316 0.7804133684




  GWAS USING LINEAR MIXED MODELS