Project measure / variable:   Auwerx1   vert_act_HFD

ID, description, units MPD:111307   vert_act_HFD   vertical activity (beam breaks) at night, basal activity test, for 48h   [n/h]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 23wks
Procedure monitoring system
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Auwerx1 - vertical activity (beam breaks) at night, basal activity test, for 48h HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means389.6   n/h
Median of the strain means359.9   n/h
SD of the strain means± 181.8
Coefficient of variation (CV)0.4668
Min–max range of strain means148.7   –   837.0   n/h
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 7963638.2936 144793.4235 3.9583 < 0.0001
Residuals 179 6547738.7441 36579.5461


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 429.0 214.5   5 95.94 0.5001 197.0, 663.0 0.22
BXD100 m 341.8 158.6   5 70.94 0.4641 192.0, 543.0 -0.26
BXD101 m 452.8 145.8   4 72.91 0.3221 307.0, 638.0 0.35
BXD11 m 732.2 338.8   5 151.5 0.4628 245.0, 1137.0 1.88
BXD12 m 533.8 131.1   5 58.63 0.2456 400.0, 675.0 0.79
BXD16 m 371.5 27.38   4 13.69 0.0737 333.0, 397.0 -0.1
BXD2 m 353.8 104.7   4 52.36 0.296 200.0, 424.0 -0.2
BXD27 m 712.2 436.4   4 218.2 0.6127 340.0, 1237.0 1.77
BXD32 m 148.7 11.015   3 6.3596 0.0741 136.0, 156.0 -1.32
BXD34 m 656.6 212.0   5 94.83 0.3229 295.0, 822.0 1.47
BXD39 m 290.0 67.5   4 33.752 0.2328 207.0, 368.0 -0.55
BXD40 m 742.2 220.0   4 110.0 0.2964 503.0, 1005.0 1.94
BXD43 m 727.3 215.2   3 124.2 0.2959 586.0, 975.0 1.86
BXD44 m 162.4 92.87   9 30.957 0.5717 85.0, 367.0 -1.25
BXD45 m 567.2 327.1   4 163.5 0.5766 327.0, 1042.0 0.98
BXD48 m 237.8 139.5   5 62.37 0.5865 119.7, 443.8 -0.83
BXD48a m 427.0 271.4   3 156.7 0.6355 246.0, 739.0 0.21
BXD49 m 402.9 79.29   5 35.459 0.1968 289.7, 501.2 0.07
BXD50 m 635.8 212.8   4 106.4 0.3347 413.0, 925.0 1.35
BXD51 m 335.5 298.8   4 149.4 0.8905 63.0, 702.0 -0.3
BXD53 m 388.0 21.213   2   15.0 0.0547 373.0, 403.0 -0.01
BXD55 m 827.8 282.4   4 141.2 0.3412 465.0, 1155.0 2.41
BXD56 m 215.0 136.9   3 79.03 0.6366 115.0, 371.0 -0.96
BXD6 m 314.4 126.0   5 56.33 0.4007 204.0, 525.0 -0.41
BXD60 m 218.6 67.4   5 30.144 0.3083 132.0, 295.0 -0.94
BXD61 m 197.9 59.93   5 26.803 0.3029 137.7, 290.2 -1.05
BXD62 m 260.5 188.2   4 94.11 0.7224 130.6, 539.0 -0.71
BXD63 m 412.5 65.76   2   46.5 0.1594 366.0, 459.0 0.13
BXD64 m 279.8 111.2   4 55.6 0.3975 178.4, 432.7 -0.6
BXD65 m 410.7 377.6   4 188.8 0.9196 213.6, 977.0 0.12
BXD65a m 330.2 83.75   4 41.876 0.2536 226.0, 419.0 -0.33
BXD66 m 197.6 68.95   5 30.835 0.3489 138.3, 304.7 -1.06
BXD67 m 433.4 248.0   5 110.9 0.5722 199.0, 811.0 0.24
BXD68 m 407.6 169.5   4 84.75 0.4158 232.2, 561.8 0.1
BXD69 m 509.6 192.1   5 85.92 0.377 314.0, 802.0 0.66
BXD70 m 275.6 94.31   4 47.153 0.3421 154.0, 360.9 -0.63
BXD71 m 189.0 11.314   2   8.0 0.0599 181.0, 197.0 -1.1
BXD73 m 333.0 150.3   5 67.22 0.4514 200.8, 583.9 -0.31
BXD73a m 468.0 343.8   5 153.8 0.7346 242.7, 1077.0 0.43
BXD73b m 344.5 301.9   2   213.5 0.8764 131.0, 558.0 -0.25
BXD75 m 192.2 52.78   5 23.606 0.2746 136.6, 263.2 -1.09
BXD77 m 202.8 77.87   5 34.826 0.384 131.0, 305.0 -1.03
BXD79 m 319.0 117.7   4 58.84 0.3689 158.0, 436.0 -0.39
BXD8 m 426.2 174.3   4 87.13 0.4088 297.0, 671.0 0.2
BXD81 m 177.5 56.67   4 28.333 0.3192 105.0, 233.0 -1.17
BXD83 m 200.4 25.528   4 12.764 0.1274 181.8, 238.1 -1.04
BXD84 m 365.9 300.2   3 173.3 0.8205 95.0, 688.7 -0.13
BXD85 m 184.0 16.523   3 9.5394 0.0898 173.0, 203.0 -1.13
BXD87 m 380.4 52.05   4 26.027 0.1368 338.7, 452.5 -0.05
BXD89 m 408.0 141.2   4 70.58 0.346 285.7, 530.8 0.1
BXD90 m 260.5 188.2   4 94.11 0.7224 130.6, 539.0 -0.71
BXD95 m 209.8 37.924   4 18.962 0.1808 183.0, 266.0 -0.99
BXD98 m 287.4 174.6   5 78.11 0.6077 161.0, 586.0 -0.56
BXD99 m 837.0 234.9   5 105.1 0.2807 591.4, 1119.0 2.46
C57BL/6J m 372.2 85.58   4 42.789 0.2299 287.0, 456.0 -0.1
DBA/2J m 718.8 366.0   5 163.7 0.5092 342.0, 1246.0 1.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 429.0 85.5330884 597.7829081129 260.2170918871
BXD100 m 341.8 85.5330884 510.5829081129 173.0170918871
BXD101 m 452.75 95.6288999939 641.4550279903 264.0449720098
BXD11 m 732.2 85.5330884 900.9829081129 563.4170918871
BXD12 m 533.8 85.5330884 702.5829081129 365.0170918871
BXD16 m 371.5 95.6288999939 560.2050279903 182.7949720097
BXD2 m 353.75 95.6288999939 542.4550279903 165.0449720097
BXD27 m 712.25 95.6288999939 900.9550279903 523.5449720098
BXD32 m 148.6666666667 110.4227423076 366.5644640819 -69.2311307485
BXD34 m 656.6 85.5330884 825.3829081129 487.8170918871
BXD39 m 290.0 95.6288999939 478.7050279903 101.2949720097
BXD40 m 742.25 95.6288999939 930.9550279902 553.5449720097
BXD43 m 727.3333333333 110.4227423076 945.2311307485 509.4355359181
BXD44 m 162.4444444444 63.7525999959 288.2477964379 36.6410924509
BXD45 m 567.25 95.6288999939 755.9550279903 378.5449720097
BXD48 m 237.78 85.5330884 406.5629081129 68.9970918871
BXD48a m 427.0 110.4227423076 644.8977974152 209.1022025848
BXD49 m 402.94 85.5330884 571.7229081129 234.1570918871
BXD50 m 635.75 95.6288999939 824.4550279902 447.0449720097
BXD51 m 335.5 95.6288999939 524.2050279903 146.7949720097
BXD53 m 388.0 135.2396873262 654.8692098718 121.1307901282
BXD55 m 827.75 95.6288999939 1016.4550279903 639.0449720097
BXD56 m 215.0 110.4227423076 432.8977974152 -2.8977974152
BXD6 m 314.4 85.5330884 483.1829081129 145.6170918871
BXD60 m 218.6 85.5330884 387.3829081129 49.8170918871
BXD61 m 197.88 85.5330884 366.6629081129 29.0970918871
BXD62 m 260.55 95.6288999939 449.2550279903 71.8449720097
BXD63 m 412.5 135.2396873262 679.3692098718 145.6307901282
BXD64 m 279.75 95.6288999939 468.4550279903 91.0449720097
BXD65 m 410.675 95.6288999939 599.3800279903 221.9699720097
BXD65a m 330.25 95.6288999939 518.9550279903 141.5449720097
BXD66 m 197.6 85.5330884 366.3829081129 28.8170918871
BXD67 m 433.4 85.5330884 602.1829081129 264.6170918871
BXD68 m 407.625 95.6288999939 596.3300279903 218.9199720097
BXD69 m 509.6 85.5330884 678.3829081129 340.8170918871
BXD70 m 275.65 95.6288999939 464.3550279903 86.9449720097
BXD71 m 189.0 135.2396873262 455.8692098718 -77.8692098718
BXD73 m 332.98 85.5330884 501.7629081129 164.1970918871
BXD73a m 468.04 85.5330884 636.8229081129 299.2570918871
BXD73b m 344.5 135.2396873262 611.3692098718 77.6307901282
BXD75 m 192.2 85.5330884 360.9829081129 23.4170918871
BXD77 m 202.8 85.5330884 371.5829081129 34.0170918871
BXD79 m 319.0 95.6288999939 507.7050279903 130.2949720097
BXD8 m 426.25 95.6288999939 614.9550279903 237.5449720097
BXD81 m 177.5 95.6288999939 366.2050279903 -11.2050279903
BXD83 m 200.425 95.6288999939 389.1300279903 11.7199720097
BXD84 m 365.9 110.4227423076 583.7977974152 148.0022025848
BXD85 m 184.0 110.4227423076 401.8977974152 -33.8977974152
BXD87 m 380.4 95.6288999939 569.1050279903 191.6949720097
BXD89 m 408.0 95.6288999939 596.7050279903 219.2949720097
BXD90 m 260.55 95.6288999939 449.2550279903 71.8449720097
BXD95 m 209.75 95.6288999939 398.4550279903 21.0449720097
BXD98 m 287.4 85.5330884 456.1829081129 118.6170918871
BXD99 m 836.98 85.5330884 1005.7629081129 668.1970918871
C57BL/6J m 372.25 95.6288999939 560.9550279903 183.5449720097
DBA/2J m 718.8 85.5330884 887.5829081129 550.0170918871




  GWAS USING LINEAR MIXED MODELS