Project measure / variable:   Auwerx1   horiz_act_CD

ID, description, units MPD:111304   horiz_act_CD   horizontal activity (beam breaks) at night, basal activity test, for 48h   [n/h]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 23wks
Procedure monitoring system
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Auwerx1 - horizontal activity (beam breaks) at night, basal activity test, for 48h CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means5151.0   n/h
Median of the strain means4980.0   n/h
SD of the strain means± 1407.0
Coefficient of variation (CV)0.2732
Min–max range of strain means3310.0   –   9801.0   n/h
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 461314058.9663 8237751.053 2.9991 < 0.0001
Residuals 189 519125705.8833 2746696.8565


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 5603.0 2048.0   5 915.7 0.3654 2972.0, 7801.0 0.32
BXD100 m 6316.0 3243.0   3 1872.0 0.5135 3794.0, 9974.0 0.83
BXD101 m 8332.0 895.9   4 447.9 0.1075 7448.0, 9365.0 2.26
BXD11 m 4953.0 834.4   2   590.0 0.1685 4363.0, 5543.0 -0.14
BXD12 m 5176.0 301.5   5 134.8 0.0582 4929.0, 5702.0 0.02
BXD16 m 4139.0 966.4   4 483.2 0.2335 3217.0, 5194.0 -0.72
BXD2 m 4758.0 1892.0   4 946.0 0.3977 2937.0, 6669.0 -0.28
BXD27 m 5503.0 1323.0   5 591.8 0.2405 4370.0, 7608.0 0.25
BXD32 m 6243.0 1546.0   5 691.4 0.2476 4714.0, 8708.0 0.78
BXD34 m 4738.0 825.9   4 413.0 0.1743 3745.0, 5746.0 -0.29
BXD39 m 3821.0 572.4   5 256.0 0.1498 3420.0, 4816.0 -0.95
BXD40 m 7769.0 1313.0   3 757.9 0.169 6763.0, 9254.0 1.86
BXD43 m 5637.0 299.9   3 173.2 0.0532 5297.0, 5863.0 0.35
BXD44 m 3894.0 1069.0   9 356.3 0.2745 2711.0, 5457.0 -0.89
BXD45 m 8139.0 2564.0   4 1282.0 0.3151 5999.0, 11566.0 2.12
BXD48 m 5311.0 1770.0   5 791.4 0.3332 2809.0, 7031.0 0.11
BXD48a m 5098.0 1207.0   4 603.3 0.2367 3508.0, 6127.0 -0.04
BXD49 m 4288.0 746.3   4 373.2 0.1741 3500.0, 5022.0 -0.61
BXD50 m 4312.0 814.7   4 407.4 0.1889 3534.0, 5403.0 -0.6
BXD51 m 4599.0 693.8   4 346.9 0.1508 3964.0, 5211.0 -0.39
BXD53 m 5738.0 2013.0   5 900.1 0.3507 3408.0, 8004.0 0.42
BXD55 m 6226.0 981.6   5 439.0 0.1577 5110.0, 7740.0 0.76
BXD56 m 9801.0 5001.0   4 2500.0 0.5102 5153.0, 15878.0 3.3
BXD6 m 3878.0 500.9   5 224.0 0.1292 3474.0, 4742.0 -0.9
BXD60 m 5063.0 1457.0   5 651.7 0.2878 3270.0, 6371.0 -0.06
BXD61 m 4510.0 223.4   3 129.0 0.0495 4343.0, 4764.0 -0.46
BXD62 m 3596.0 293.9   4 147.0 0.0817 3361.0, 4018.0 -1.1
BXD63 m 4125.0 574.0   4 287.0 0.1392 3367.0, 4753.0 -0.73
BXD64 m 5092.0 1016.0   4 507.8 0.1994 4010.0, 6429.0 -0.04
BXD65 m 4618.0 1209.0   4 604.7 0.2619 3629.0, 6153.0 -0.38
BXD65a m 3771.0 552.9   5 247.3 0.1466 3208.0, 4554.0 -0.98
BXD65b m 5120.0 139.3   4 69.67 0.0272 4921.0, 5236.0 -0.02
BXD66 m 3532.0 1036.0   5 463.1 0.2931 2358.0, 4521.0 -1.15
BXD67 m 4738.0 1260.0   5 563.6 0.266 3129.0, 6042.0 -0.29
BXD68 m 5520.0 1653.0   3 954.5 0.2995 3848.0, 7154.0 0.26
BXD69 m 6017.0 1483.0   5 663.1 0.2464 3874.0, 8064.0 0.62
BXD70 m 5343.0 2801.0   4 1400.0 0.5242 3331.0, 9274.0 0.14
BXD71 m 3573.0 1144.0   5 511.6 0.3202 2612.0, 5458.0 -1.12
BXD73 m 5502.0 1363.0   4 681.3 0.2477 4444.0, 7431.0 0.25
BXD73a m 4829.0 931.0   5 416.4 0.1928 4064.0, 6360.0 -0.23
BXD73b m 3917.0 518.6   5 231.9 0.1324 3249.0, 4534.0 -0.88
BXD75 m 4128.0 494.0   5 220.9 0.1197 3444.0, 4786.0 -0.73
BXD77 m 4820.0 1001.0   5 447.7 0.2077 3941.0, 6438.0 -0.24
BXD79 m 3542.0 414.5   5 185.4 0.117 2831.0, 3874.0 -1.14
BXD8 m 9433.0 7818.0   4 3909.0 0.8288 5112.0, 21140.0 3.04
BXD81 m 3714.0 790.2   4 395.1 0.2128 2772.0, 4703.0 -1.02
BXD83 m 4105.0 707.1   3 408.2 0.1723 3299.0, 4622.0 -0.74
BXD84 m 5446.0 707.6   4 353.8 0.1299 4689.0, 6083.0 0.21
BXD85 m 3310.0 262.0   5 117.2 0.0791 3028.0, 3672.0 -1.31
BXD87 m 5033.0 605.1   4 302.5 0.1202 4251.0, 5682.0 -0.08
BXD89 m 5012.0 859.8   4 429.9 0.1716 4245.0, 6147.0 -0.1
BXD90 m 3601.0 735.4   4 367.7 0.2042 2804.0, 4518.0 -1.1
BXD95 m 4330.0 1130.0   4 565.1 0.261 3225.0, 5753.0 -0.58
BXD98 m 4980.0 709.8   4 354.9 0.1425 4207.0, 5646.0 -0.12
BXD99 m 6253.0 1198.0   5 535.9 0.1916 4752.0, 8013.0 0.78
C57BL/6J m 5883.0 521.7   4 260.9 0.0887 5366.0, 6553.0 0.52
DBA/2J m 6884.0 670.9   3 387.4 0.0975 6112.0, 7329.0 1.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 5603.2 741.1743191079 7065.2368146274 4141.1631853726
BXD100 m 6315.6666666667 956.8519315139 8203.148078198 4428.1852551354
BXD101 m 8332.0000000001 828.6580803512 9966.6068515572 6697.3931484431
BXD11 m 4953.0 1171.8994958028 7264.6831786199 2641.3168213801
BXD12 m 5176.4 741.1743191079 6638.4368146274 3714.3631853727
BXD16 m 4138.7499999999 828.6580803512 5773.356851557 2504.1431484429
BXD2 m 4757.75 828.6580803512 6392.356851557 3123.143148443
BXD27 m 5502.8 741.1743191079 6964.8368146273 4040.7631853726
BXD32 m 6243.2 741.1743191079 7705.2368146274 4781.1631853727
BXD34 m 4737.5 828.6580803512 6372.106851557 3102.8931484429
BXD39 m 3821.2 741.1743191079 5283.2368146273 2359.1631853726
BXD40 m 7769.0 956.8519315139 9656.4814115313 5881.5185884687
BXD43 m 5637.3333333333 956.8519315139 7524.8147448646 3749.851921802
BXD44 m 3893.6666666667 552.4387202342 4983.4045677047 2803.9287656286
BXD45 m 8138.75 828.6580803512 9773.356851557 6504.143148443
BXD48 m 5310.8 741.1743191079 6772.8368146274 3848.7631853726
BXD48a m 5097.5 828.6580803512 6732.106851557 3462.893148443
BXD49 m 4287.5 828.6580803512 5922.106851557 2652.893148443
BXD50 m 4312.5 828.6580803512 5947.106851557 2677.8931484429
BXD51 m 4599.25 828.6580803512 6233.856851557 2964.643148443
BXD53 m 5738.4 741.1743191079 7200.4368146273 4276.3631853726
BXD55 m 6226.4 741.1743191079 7688.4368146274 4764.3631853726
BXD56 m 9800.75 828.6580803512 11435.356851557 8166.143148443
BXD6 m 3878.2 741.1743191079 5340.2368146274 2416.1631853727
BXD60 m 5062.8 741.1743191079 6524.8368146274 3600.7631853726
BXD61 m 4510.3333333334 956.8519315139 6397.8147448647 2622.8519218021
BXD62 m 3595.7500000001 828.6580803512 5230.3568515571 1961.1431484431
BXD63 m 4124.7500000001 828.6580803512 5759.3568515571 2490.143148443
BXD64 m 5092.5 828.6580803512 6727.1068515571 3457.893148443
BXD65 m 4617.75 828.6580803512 6252.356851557 2983.1431484429
BXD65a m 3771.0 741.1743191079 5233.0368146274 2308.9631853726
BXD65b m 5120.0 828.6580803512 6754.606851557 3485.393148443
BXD66 m 3532.4 741.1743191079 4994.4368146274 2070.3631853727
BXD67 m 4738.4 741.1743191079 6200.4368146273 3276.3631853726
BXD68 m 5520.0 956.8519315139 7407.4814115313 3632.5185884687
BXD69 m 6017.0 741.1743191079 7479.0368146274 4554.9631853727
BXD70 m 5342.75 828.6580803512 6977.356851557 3708.143148443
BXD71 m 3572.8 741.1743191079 5034.8368146274 2110.7631853726
BXD73 m 5502.0 828.6580803512 7136.606851557 3867.393148443
BXD73a m 4829.4 741.1743191079 6291.4368146274 3367.3631853726
BXD73b m 3916.8 741.1743191079 5378.8368146274 2454.7631853726
BXD75 m 4128.2 741.1743191079 5590.2368146274 2666.1631853727
BXD77 m 4819.6 741.1743191079 6281.6368146274 3357.5631853726
BXD79 m 3542.2 741.1743191079 5004.2368146274 2080.1631853726
BXD8 m 9432.75 828.6580803512 11067.356851557 7798.143148443
BXD81 m 3713.75 828.6580803512 5348.356851557 2079.143148443
BXD83 m 4104.6666666667 956.8519315139 5992.148078198 2217.1852551354
BXD84 m 5446.0 828.6580803512 7080.606851557 3811.393148443
BXD85 m 3310.2 741.1743191079 4772.2368146274 1848.1631853727
BXD87 m 5033.0 828.6580803512 6667.606851557 3398.393148443
BXD89 m 5012.0 828.6580803512 6646.606851557 3377.393148443
BXD90 m 3600.75 828.6580803512 5235.356851557 1966.143148443
BXD95 m 4330.5 828.6580803512 5965.106851557 2695.893148443
BXD98 m 4980.25 828.6580803512 6614.856851557 3345.643148443
BXD99 m 6253.2 741.1743191079 7715.2368146274 4791.1631853726
C57BL/6J m 5883.0 828.6580803512 7517.606851557 4248.393148443
DBA/2J m 6883.6666666667 956.8519315139 8771.148078198 4996.1852551354




  GWAS USING LINEAR MIXED MODELS