Project measure / variable:   Auwerx1   bw_basal_HFD

ID, description, units MPD:111301   bw_basal_HFD   body weight prior to basal activity test, at 23 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 23wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight prior to basal activity test, at 23 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means48.499   g
Median of the strain means48.01   g
SD of the strain means± 7.2649
Coefficient of variation (CV)0.1498
Min–max range of strain means31.285   –   63.23   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 13842.4112 251.6802 14.1337 < 0.0001
Residuals 198 3525.8096 17.8071


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 40.934 4.3309   5 1.9368 0.1058 33.48, 44.75 -1.04
BXD100 m 55.14 3.9513   5 1.7671 0.0717 51.34, 59.71 0.91
BXD101 m 52.23 2.2612   4 1.1306 0.0433 49.09, 54.28 0.51
BXD11 m 48.958 4.6489   5 2.079 0.095 41.4, 53.44 0.06
BXD12 m 32.294 2.7184   5 1.2157 0.0842 28.18, 35.01 -2.23
BXD16 m 60.1 3.1377   5 1.4032 0.0522 56.1, 63.1 1.6
BXD2 m 46.142 6.2529   5 2.7964 0.1355 35.72, 51.67 -0.32
BXD27 m 51.22 2.0073   4 1.0036 0.0392 49.2, 54.0 0.37
BXD32 m 50.2 6.8453   3 3.9521 0.1364 43.99, 57.54 0.23
BXD34 m 41.206 7.3854   5 3.3029 0.1792 32.21, 49.88 -1.0
BXD39 m 46.95 1.2445   5 0.55655 0.0265 45.6, 48.59 -0.21
BXD40 m 31.285 3.112   4 1.556 0.0995 28.86, 35.58 -2.37
BXD43 m 44.583 3.6711   3 2.1195 0.0823 40.35, 46.89 -0.54
BXD44 m 63.23 4.0599   9 1.3533 0.0642 56.87, 71.07 2.03
BXD45 m 44.958 2.1051   5 0.94144 0.0468 42.07, 47.97 -0.49
BXD48 m 57.22 4.9534   5 2.2152 0.0866 50.49, 62.29 1.2
BXD48a m 61.79 4.3871   3 2.5329 0.071 59.12, 66.85 1.83
BXD49 m 53.04 10.093   5 4.5136 0.1903 39.63, 64.26 0.63
BXD50 m 47.5 3.702   5 1.6556 0.0779 42.35, 51.12 -0.14
BXD51 m 61.97 4.7792   4 2.3896 0.0771 56.51, 67.62 1.85
BXD53 m 49.012 2.3334   5 1.0435 0.0476 45.44, 51.37 0.07
BXD55 m 41.907 0.93214   4 0.46607 0.0222 41.02, 43.22 -0.91
BXD56 m 41.523 2.1023   3 1.2138 0.0506 39.48, 43.68 -0.96
BXD6 m 47.28 4.2979   5 1.9221 0.0909 41.0, 52.2 -0.17
BXD60 m 61.61 2.3837   5 1.066 0.0387 58.64, 63.96 1.8
BXD61 m 54.39 1.5827   5 0.70782 0.0291 52.11, 56.43 0.81
BXD62 m 44.483 1.4152   4 0.70758 0.0318 42.37, 45.38 -0.55
BXD63 m 46.11 0.45255   2   0.32 0.0098 45.79, 46.43 -0.33
BXD64 m 48.52 5.2596   4 2.6298 0.1084 41.96, 53.92 0.0
BXD65 m 59.58 2.5419   4 1.271 0.0427 57.38, 63.06 1.53
BXD65a m 53.55 4.4026   4 2.2013 0.0822 49.62, 59.83 0.7
BXD66 m 56.47 5.7363   5 2.5653 0.1016 46.35, 59.75 1.1
BXD67 m 52.16 4.2588   5 1.9046 0.0816 45.35, 56.62 0.5
BXD68 m 43.943 2.8594   4 1.4297 0.0651 41.12, 47.86 -0.63
BXD69 m 41.616 1.6029   5 0.71684 0.0385 40.31, 44.22 -0.95
BXD70 m 47.333 3.9007   4 1.9504 0.0824 42.93, 52.2 -0.16
BXD71 m 50.08 5.5633   4 2.7816 0.1111 43.93, 57.12 0.22
BXD73 m 42.736 5.3814   5 2.4066 0.1259 33.86, 47.0 -0.79
BXD73a m 46.328 2.1505   5 0.96172 0.0464 44.12, 49.75 -0.3
BXD73b m 49.506 1.588   5 0.71019 0.0321 47.71, 51.65 0.14
BXD75 m 45.228 5.8472   5 2.6149 0.1293 34.94, 48.81 -0.45
BXD77 m 46.454 5.2298   5 2.3388 0.1126 41.33, 51.88 -0.28
BXD79 m 47.498 3.4915   5 1.5615 0.0735 41.99, 50.59 -0.14
BXD8 m 37.288 4.1009   5 1.834 0.11 31.85, 41.93 -1.54
BXD81 m 50.57 2.7658   4 1.3829 0.0547 48.1, 53.61 0.29
BXD83 m 37.188 3.7167   4 1.8583 0.0999 31.63, 39.34 -1.56
BXD84 m 53.96 5.5947   3 3.2301 0.1037 50.68, 60.42 0.75
BXD85 m 53.59 2.2354   4 1.1177 0.0417 51.45, 55.75 0.7
BXD87 m 34.968 2.4598   5 1.1 0.0703 32.03, 38.77 -1.86
BXD89 m 41.35 1.5915   4 0.79577 0.0385 39.78, 42.99 -0.98
BXD90 m 53.5 3.7238   4 1.8619 0.0696 48.09, 56.48 0.69
BXD95 m 52.32 5.1673   5 2.3109 0.0988 43.5, 56.7 0.53
BXD98 m 51.77 2.487   5 1.1122 0.048 48.31, 54.27 0.45
BXD99 m 52.42 4.5008   5 2.0128 0.0859 47.61, 58.39 0.54
C57BL/6J m 44.244 5.86   5 2.6207 0.1324 34.6, 48.41 -0.59
DBA/2J m 44.534 5.0498   5 2.2584 0.1134 37.1, 49.17 -0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 40.934 1.8871734923 44.6555391106 37.2124608894
BXD100 m 55.142 1.8871734923 58.8635391106 51.4204608894
BXD101 m 52.235 2.1099241071 56.3958072161 48.0741927839
BXD11 m 48.958 1.8871734923 52.6795391106 45.2364608894
BXD12 m 32.294 1.8871734923 36.0155391106 28.5724608894
BXD16 m 60.1 1.8871734923 63.8215391106 56.3784608894
BXD2 m 46.142 1.8871734923 49.8635391106 42.4204608894
BXD27 m 51.225 2.1099241071 55.3858072161 47.0641927839
BXD32 m 50.2 2.4363305024 55.0044863325 45.3955136675
BXD34 m 41.206 1.8871734923 44.9275391106 37.4844608894
BXD39 m 46.95 1.8871734923 50.6715391106 43.2284608894
BXD40 m 31.285 2.1099241071 35.4458072161 27.1241927839
BXD43 m 44.5833333333 2.4363305024 49.3878196658 39.7788470008
BXD44 m 63.2255555556 1.4066160714 65.9994270329 60.4516840782
BXD45 m 44.958 1.8871734923 48.6795391106 41.2364608894
BXD48 m 57.22 1.8871734923 60.9415391106 53.4984608894
BXD48a m 61.7866666667 2.4363305024 66.5911529992 56.9821803342
BXD49 m 53.042 1.8871734923 56.7635391106 49.3204608894
BXD50 m 47.5 1.8871734923 51.2215391106 43.7784608894
BXD51 m 61.9725 2.1099241071 66.1333072161 57.8116927839
BXD53 m 49.012 1.8871734923 52.7335391106 45.2904608894
BXD55 m 41.9075 2.1099241071 46.0683072161 37.7466927839
BXD56 m 41.5233333333 2.4363305024 46.3278196658 36.7188470008
BXD6 m 47.28 1.8871734923 51.0015391106 43.5584608894
BXD60 m 61.61 1.8871734923 65.3315391106 57.8884608894
BXD61 m 54.392 1.8871734923 58.1135391106 50.6704608894
BXD62 m 44.4825 2.1099241071 48.6433072161 40.3216927839
BXD63 m 46.11 2.9838832878 51.9942699954 40.2257300046
BXD64 m 48.52 2.1099241071 52.6808072161 44.3591927839
BXD65 m 59.5775 2.1099241071 63.7383072161 55.4166927839
BXD65a m 53.5475 2.1099241071 57.7083072161 49.3866927839
BXD66 m 56.474 1.8871734923 60.1955391106 52.7524608894
BXD67 m 52.16 1.8871734923 55.8815391106 48.4384608894
BXD68 m 43.9425 2.1099241071 48.1033072161 39.7816927839
BXD69 m 41.616 1.8871734923 45.3375391106 37.8944608894
BXD70 m 47.3325 2.1099241071 51.4933072161 43.1716927839
BXD71 m 50.085 2.1099241071 54.2458072161 45.9241927839
BXD73 m 42.736 1.8871734923 46.4575391106 39.0144608894
BXD73a m 46.328 1.8871734923 50.0495391106 42.6064608894
BXD73b m 49.506 1.8871734923 53.2275391106 45.7844608894
BXD75 m 45.228 1.8871734923 48.9495391106 41.5064608894
BXD77 m 46.454 1.8871734923 50.1755391106 42.7324608894
BXD79 m 47.498 1.8871734923 51.2195391106 43.7764608894
BXD8 m 37.288 1.8871734923 41.0095391106 33.5664608894
BXD81 m 50.5725 2.1099241071 54.7333072161 46.4116927839
BXD83 m 37.1875 2.1099241071 41.3483072161 33.0266927839
BXD84 m 53.96 2.4363305024 58.7644863325 49.1555136675
BXD85 m 53.5925 2.1099241071 57.7533072161 49.4316927839
BXD87 m 34.968 1.8871734923 38.6895391106 31.2464608894
BXD89 m 41.35 2.1099241071 45.5108072161 37.1891927839
BXD90 m 53.505 2.1099241071 57.6658072161 49.3441927839
BXD95 m 52.32 1.8871734923 56.0415391106 48.5984608894
BXD98 m 51.77 1.8871734923 55.4915391106 48.0484608894
BXD99 m 52.416 1.8871734923 56.1375391106 48.6944608894
C57BL/6J m 44.244 1.8871734923 47.9655391106 40.5224608894
DBA/2J m 44.534 1.8871734923 48.2555391106 40.8124608894




  GWAS USING LINEAR MIXED MODELS