Project measure / variable:   Auwerx1   ftm_23wks_HFD

ID, description, units MPD:111297   ftm_23wks_HFD   fat tissue mass, 23 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   50 strains     sex: m     age: 23wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - fat tissue mass, 23 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested50 strains
Mean of the strain means19.74   g
Median of the strain means19.684   g
SD of the strain means± 6.0755
Coefficient of variation (CV)0.3078
Min–max range of strain means5.877   –   36.772   g
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 49 7785.6466 158.8907 16.7774 < 0.0001
Residuals 168 1591.0518 9.4705


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 13.679 3.2652   5 1.4603 0.2387 7.976, 16.311 -1.0
BXD100 m 21.551 2.6134   5 1.1687 0.1213 18.891, 25.774 0.3
BXD101 m 21.58 1.5736   4 0.78678 0.0729 19.635, 23.21 0.3
BXD11 m 19.589 3.8736   5 1.7323 0.1977 13.511, 23.949 -0.02
BXD12 m 6.3616 2.1644   5 0.96795 0.3402 2.94, 8.487 -2.2
BXD16 m 26.357 1.8985   5 0.84904 0.072 23.636, 28.102 1.09
BXD2 m 17.964 3.8337   5 1.7145 0.2134 11.99, 21.703 -0.29
BXD27 m 21.72 0.49334   4 0.24667 0.0227 21.034, 22.21 0.33
BXD32 m 18.362 3.6578   3 2.1118 0.1992 15.664, 22.525 -0.23
BXD34 m 13.768 5.8792   5 2.6293 0.427 5.904, 19.815 -0.98
BXD39 m 19.164 0.73267   5 0.32766 0.0382 18.597, 20.402 -0.09
BXD40 m 9.8223 2.2147   4 1.1073 0.2255 7.438, 12.727 -1.63
BXD43 m 14.232 2.6527   3 1.5315 0.1864 11.943, 17.139 -0.91
BXD44 m 36.772 4.3277   4 2.1638 0.1177 31.679, 42.162 2.8
BXD48 m 26.573 2.5486   5 1.1398 0.0959 23.069, 29.352 1.12
BXD48a m 26.325 2.5751   3 1.4868 0.0978 24.429, 29.257 1.08
BXD49 m 19.954 8.112   5 3.6278 0.4065 9.781, 29.629 0.04
BXD53 m 17.378 1.2273   5 0.54888 0.0706 15.525, 18.905 -0.39
BXD55 m 5.877 1.955   4 0.97752 0.3327 4.078, 8.457 -2.28
BXD56 m 28.767 1.3958   3 0.80585 0.0485 27.952, 30.379 1.49
BXD6 m 19.116 2.9813   5 1.3333 0.156 14.544, 21.774 -0.1
BXD60 m 30.593 1.15   5 0.51429 0.0376 29.401, 32.085 1.79
BXD61 m 22.795 1.3954   5 0.62406 0.0612 21.221, 24.685 0.5
BXD62 m 17.101 0.41185   4 0.20592 0.0241 16.735, 17.617 -0.43
BXD63 m 18.566 0.57064   2   0.4035 0.0307 18.163, 18.97 -0.19
BXD64 m 20.411 3.8131   4 1.9065 0.1868 15.489, 24.51 0.11
BXD65 m 28.368 1.4315   4 0.71573 0.0505 27.302, 30.465 1.42
BXD65a m 21.957 3.7357   4 1.8679 0.1701 18.843, 27.13 0.36
BXD66 m 30.177 4.8457   5 2.1671 0.1606 22.019, 34.2 1.72
BXD67 m 25.36 3.3249   5 1.487 0.1311 20.34, 29.058 0.92
BXD68 m 15.985 0.96192   4 0.48096 0.0602 15.327, 17.415 -0.62
BXD69 m 15.848 1.3488   5 0.60322 0.0851 14.473, 18.055 -0.64
BXD71 m 21.398 3.6607   3 2.1135 0.1711 18.922, 25.603 0.27
BXD73b m 19.779 0.85572   5 0.38269 0.0433 18.792, 21.053 0.01
BXD75 m 17.924 4.5811   5 2.0487 0.2556 10.365, 21.897 -0.3
BXD77 m 19.044 3.1394   5 1.404 0.1648 16.024, 23.653 -0.11
BXD79 m 17.282 1.7756   5 0.79406 0.1027 14.459, 18.959 -0.4
BXD8 m 12.416 2.8123   5 1.2577 0.2265 9.634, 16.262 -1.21
BXD81 m 22.682 1.9156   4 0.95782 0.0845 21.076, 24.93 0.48
BXD83 m 12.251 2.1465   4 1.0733 0.1752 9.096, 13.68 -1.23
BXD84 m 22.686 4.7459   3 2.74 0.2092 19.516, 28.142 0.48
BXD85 m 20.874 2.3548   4 1.1774 0.1128 18.82, 23.861 0.19
BXD87 m 11.122 2.0224   4 1.0112 0.1818 9.698, 14.094 -1.42
BXD89 m 12.281 0.40827   4 0.20414 0.0332 11.863, 12.82 -1.23
BXD90 m 25.158 2.4635   4 1.2317 0.0979 22.141, 27.231 0.89
BXD95 m 21.274 3.9157   5 1.7512 0.1841 14.33, 23.75 0.25
BXD98 m 21.118 2.1468   5 0.96008 0.1017 18.229, 23.43 0.23
BXD99 m 22.637 3.1732   5 1.4191 0.1402 19.239, 26.589 0.48
C57BL/6J m 18.276 1.9569   4 0.97845 0.1071 16.11, 20.707 -0.24
DBA/2J m 16.745 3.5108   5 1.5701 0.2097 11.748, 19.829 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 13.6786 1.3762664394 16.3956048238 10.9615951762
BXD100 m 21.5514 1.3762664394 24.2684048238 18.8343951762
BXD101 m 21.58025 1.5387126569 24.6179537406 18.5425462594
BXD11 m 19.5892 1.3762664394 22.3062048238 16.8721951762
BXD12 m 6.3616 1.3762664394 9.0786048238 3.6445951762
BXD16 m 26.3574 1.3762664394 29.0744048238 23.6403951762
BXD2 m 17.964 1.3762664394 20.6810048238 15.2469951762
BXD27 m 21.72025 1.5387126569 24.7579537406 18.6825462594
BXD32 m 18.3616666667 1.7767523333 21.8693048114 14.854028522
BXD34 m 13.7678 1.3762664394 16.4848048238 11.0507951762
BXD39 m 19.164 1.3762664394 21.8810048238 16.4469951762
BXD40 m 9.82225 1.5387126569 12.8599537406 6.7845462594
BXD43 m 14.2316666667 1.7767523333 17.7393048114 10.724028522
BXD44 m 36.77225 1.5387126569 39.8099537406 33.7345462594
BXD48 m 26.5726 1.3762664394 29.2896048238 23.8555951762
BXD48a m 26.3253333333 1.7767523333 29.832971478 22.8176951886
BXD49 m 19.954 1.3762664394 22.6710048238 17.2369951762
BXD53 m 17.378 1.3762664394 20.0950048238 14.6609951762
BXD55 m 5.877 1.5387126569 8.9147037406 2.8392962594
BXD56 m 28.7673333333 1.7767523333 32.274971478 25.2596951886
BXD6 m 19.1156 1.3762664394 21.8326048238 16.3985951762
BXD60 m 30.5926 1.3762664394 33.3096048238 27.8755951762
BXD61 m 22.7954 1.3762664394 25.5124048238 20.0783951762
BXD62 m 17.10075 1.5387126569 20.1384537406 14.0630462594
BXD63 m 18.5665 2.1760683079 22.8624618284 14.2705381716
BXD64 m 20.4105 1.5387126569 23.4482037406 17.3727962594
BXD65 m 28.368 1.5387126569 31.4057037406 25.3302962594
BXD65a m 21.9575 1.5387126569 24.9952037406 18.9197962594
BXD66 m 30.1772 1.3762664394 32.8942048238 27.4601951762
BXD67 m 25.3602 1.3762664394 28.0772048238 22.6431951762
BXD68 m 15.985 1.5387126569 19.0227037406 12.9472962594
BXD69 m 15.848 1.3762664394 18.5650048238 13.1309951762
BXD71 m 21.398 1.7767523333 24.9056381447 17.8903618553
BXD73b m 19.7792 1.3762664394 22.4962048238 17.0621951762
BXD75 m 17.9242 1.3762664394 20.6412048238 15.2071951762
BXD77 m 19.044 1.3762664394 21.7610048238 16.3269951762
BXD79 m 17.2818 1.3762664394 19.9988048238 14.5647951762
BXD8 m 12.4158 1.3762664394 15.1328048238 9.6987951762
BXD81 m 22.682 1.5387126569 25.7197037406 19.6442962594
BXD83 m 12.25125 1.5387126569 15.2889537406 9.2135462594
BXD84 m 22.6856666667 1.7767523333 26.1933048114 19.178028522
BXD85 m 20.87425 1.5387126569 23.9119537406 17.8365462594
BXD87 m 11.12175 1.5387126569 14.1594537406 8.0840462594
BXD89 m 12.28075 1.5387126569 15.3184537406 9.2430462594
BXD90 m 25.15825 1.5387126569 28.1959537406 22.1205462594
BXD95 m 21.274 1.3762664394 23.9910048238 18.5569951762
BXD98 m 21.1176 1.3762664394 23.8346048238 18.4005951762
BXD99 m 22.637 1.3762664394 25.3540048238 19.9199951762
C57BL/6J m 18.2755 1.5387126569 21.3132037406 15.2377962594
DBA/2J m 16.7448 1.3762664394 19.4618048238 14.0277951762




  GWAS USING LINEAR MIXED MODELS