Project measure / variable:   Auwerx1   ftm_23wks_CD

ID, description, units MPD:111296   ftm_23wks_CD   fat tissue mass, 23 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   52 strains     sex: m     age: 23wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - fat tissue mass, 23 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means8.6949   g
Median of the strain means8.1917   g
SD of the strain means± 4.0491
Coefficient of variation (CV)0.4657
Min–max range of strain means2.105   –   18.12   g
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 51 3554.946 69.7048 12.1966 < 0.0001
Residuals 167 954.4243 5.7151


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 3.5662 1.859   5 0.83138 0.5213 1.787, 6.676 -1.27
BXD100 m 9.0587 7.1776   3 4.144 0.7924 2.569, 16.768 0.09
BXD101 m 7.5488 2.6016   4 1.3008 0.3446 4.424, 10.768 -0.28
BXD11 m 4.689 2.3165   2   1.638 0.494 3.051, 6.327 -0.99
BXD12 m 2.7442 0.64331   5 0.2877 0.2344 1.93, 3.459 -1.47
BXD16 m 18.12 1.6814   4 0.84071 0.0928 16.487, 20.414 2.33
BXD2 m 9.6268 2.3298   4 1.1649 0.242 6.175, 11.111 0.23
BXD27 m 11.477 2.0423   5 0.91335 0.178 9.443, 14.547 0.69
BXD32 m 6.896 2.4536   5 1.0973 0.3558 4.837, 10.914 -0.44
BXD34 m 7.8702 0.83331   4 0.41665 0.1059 7.163, 8.824 -0.2
BXD39 m 15.472 1.2531   5 0.56039 0.081 14.289, 17.42 1.67
BXD40 m 3.6497 0.63625   3 0.36734 0.1743 3.263, 4.384 -1.25
BXD43 m 5.0847 2.2681   3 1.3095 0.4461 3.727, 7.703 -0.89
BXD44 m 16.439 2.0789   4 1.0395 0.1265 13.783, 18.778 1.91
BXD48 m 10.22 3.6404   5 1.628 0.3562 6.701, 16.386 0.38
BXD48a m 10.568 1.806   4 0.90299 0.1709 8.958, 12.859 0.46
BXD49 m 5.3357 0.85341   4 0.4267 0.1599 4.366, 6.084 -0.83
BXD50 m 8.259 4.5288   4 2.2644 0.5483 2.209, 11.946 -0.11
BXD53 m 5.4402 2.0622   5 0.92226 0.3791 3.448, 8.753 -0.8
BXD55 m 2.105 0.94453   5 0.42241 0.4487 1.088, 3.296 -1.63
BXD56 m 4.0697 0.98467   3 0.5685 0.242 2.933, 4.662 -1.14
BXD6 m 6.4178 1.9075   5 0.85306 0.2972 4.157, 9.051 -0.56
BXD60 m 9.8826 3.8458   5 1.7199 0.3891 3.533, 12.895 0.29
BXD61 m 6.6847 0.70374   3 0.4063 0.1053 6.114, 7.471 -0.5
BXD62 m 4.2317 1.854   4 0.927 0.4381 1.854, 6.154 -1.1
BXD63 m 9.8945 2.9236   4 1.4618 0.2955 6.561, 13.221 0.3
BXD64 m 8.0572 1.4712   4 0.73559 0.1826 6.646, 9.483 -0.16
BXD65 m 14.467 0.6776   4 0.3388 0.0468 13.724, 15.241 1.43
BXD65a m 12.554 0.80341   5 0.3593 0.064 11.449, 13.318 0.95
BXD65b m 15.358 0.83646   4 0.41823 0.0545 14.175, 16.079 1.65
BXD66 m 14.665 5.7148   5 2.5557 0.3897 5.898, 19.854 1.47
BXD67 m 12.22 4.6487   5 2.079 0.3804 7.357, 18.062 0.87
BXD68 m 10.466 4.3081   3 2.4873 0.4116 5.524, 13.429 0.44
BXD69 m 13.748 0.59655   5 0.26679 0.0434 13.06, 14.689 1.25
BXD71 m 10.995 2.5985   5 1.1621 0.2363 6.646, 13.646 0.57
BXD73b m 12.744 1.66   5 0.74237 0.1303 11.379, 15.553 1.0
BXD75 m 8.6312 1.521   5 0.68022 0.1762 6.912, 10.589 -0.02
BXD77 m 6.5004 2.133   5 0.95393 0.3281 3.857, 8.896 -0.54
BXD79 m 10.438 1.2077   5 0.54011 0.1157 8.59, 11.66 0.43
BXD8 m 2.348 0.29949   4 0.14975 0.1276 1.947, 2.606 -1.57
BXD81 m 6.2835 3.1696   4 1.5848 0.5044 2.907, 9.902 -0.6
BXD83 m 4.447 1.087   3 0.62756 0.2444 3.774, 5.701 -1.05
BXD84 m 8.1245 2.0379   4 1.019 0.2508 5.198, 9.737 -0.14
BXD85 m 13.904 0.88071   5 0.39387 0.0633 12.577, 14.795 1.29
BXD87 m 3.5758 0.87055   4 0.43527 0.2435 2.415, 4.324 -1.26
BXD89 m 12.281 0.40827   4 0.20414 0.0332 11.863, 12.82 0.89
BXD90 m 4.5602 2.0051   4 1.0026 0.4397 2.964, 7.444 -1.02
BXD95 m 6.1197 2.2009   4 1.1004 0.3596 3.34, 8.692 -0.64
BXD98 m 9.9845 2.2063   4 1.1031 0.221 6.889, 11.961 0.32
BXD99 m 12.047 0.98903   5 0.44231 0.0821 11.035, 13.673 0.83
C57BL/6J m 4.2942 1.0005   4 0.50023 0.233 3.279, 5.233 -1.09
DBA/2J m 7.9713 2.6345   3 1.521 0.3305 5.063, 10.198 -0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 3.5662 1.0691225659 5.6769376314 1.4554623686
BXD100 m 9.0586666667 1.3802312976 11.7836172315 6.3337161018
BXD101 m 7.54875 1.1953153668 9.9086264132 5.1888735868
BXD11 m 4.689 1.6904312031 8.0263692291 1.3516307709
BXD12 m 2.7442 1.0691225659 4.8549376314 0.6334623686
BXD16 m 18.12025 1.1953153668 20.4801264132 15.7603735868
BXD2 m 9.62675 1.1953153668 11.9866264132 7.2668735868
BXD27 m 11.4768 1.0691225659 13.5875376314 9.3660623686
BXD32 m 6.896 1.0691225659 9.0067376314 4.7852623686
BXD34 m 7.87025 1.1953153668 10.2301264132 5.5103735868
BXD39 m 15.4724 1.0691225659 17.5831376314 13.3616623686
BXD40 m 3.6496666667 1.3802312976 6.3746172315 0.9247161018
BXD43 m 5.0846666667 1.3802312976 7.8096172315 2.3597161018
BXD44 m 16.4395 1.1953153668 18.7993764132 14.0796235868
BXD48 m 10.2198 1.0691225659 12.3305376314 8.1090623686
BXD48a m 10.56775 1.1953153668 12.9276264132 8.2078735868
BXD49 m 5.33575 1.1953153668 7.6956264132 2.9758735868
BXD50 m 8.259 1.1953153668 10.6188764132 5.8991235868
BXD53 m 5.4402 1.0691225659 7.5509376314 3.3294623686
BXD55 m 2.105 1.0691225659 4.2157376314 -0.0057376314
BXD56 m 4.0696666667 1.3802312976 6.7946172315 1.3447161018
BXD6 m 6.4178 1.0691225659 8.5285376314 4.3070623686
BXD60 m 9.8826 1.0691225659 11.9933376314 7.7718623686
BXD61 m 6.6846666667 1.3802312976 9.4096172315 3.9597161018
BXD62 m 4.23175 1.1953153668 6.5916264132 1.8718735868
BXD63 m 9.8945 1.1953153668 12.2543764132 7.5346235868
BXD64 m 8.05725 1.1953153668 10.4171264132 5.6973735868
BXD65 m 14.46675 1.1953153668 16.8266264132 12.1068735868
BXD65a m 12.5536 1.0691225659 14.6643376314 10.4428623686
BXD65b m 15.358 1.1953153668 17.7178764132 12.9981235868
BXD66 m 14.6646 1.0691225659 16.7753376314 12.5538623686
BXD67 m 12.2204 1.0691225659 14.3311376314 10.1096623686
BXD68 m 10.466 1.3802312976 13.1909505649 7.7410494351
BXD69 m 13.7478 1.0691225659 15.8585376314 11.6370623686
BXD71 m 10.9948 1.0691225659 13.1055376314 8.8840623686
BXD73b m 12.7436 1.0691225659 14.8543376314 10.6328623686
BXD75 m 8.6312 1.0691225659 10.7419376314 6.5204623686
BXD77 m 6.5004 1.0691225659 8.6111376314 4.3896623686
BXD79 m 10.438 1.0691225659 12.5487376314 8.3272623686
BXD8 m 2.348 1.1953153668 4.7078764132 -0.0118764132
BXD81 m 6.2835 1.1953153668 8.6433764132 3.9236235868
BXD83 m 4.447 1.3802312976 7.1719505649 1.7220494351
BXD84 m 8.1245 1.1953153668 10.4843764132 5.7646235868
BXD85 m 13.9038 1.0691225659 16.0145376314 11.7930623686
BXD87 m 3.57575 1.1953153668 5.9356264132 1.2158735868
BXD89 m 12.28075 1.1953153668 14.6406264132 9.9208735868
BXD90 m 4.56025 1.1953153668 6.9201264132 2.2003735868
BXD95 m 6.11975 1.1953153668 8.4796264132 3.7598735868
BXD98 m 9.9845 1.1953153668 12.3443764132 7.6246235868
BXD99 m 12.047 1.0691225659 14.1577376314 9.9362623686
C57BL/6J m 4.29425 1.1953153668 6.6541264132 1.9343735868
DBA/2J m 7.9713333333 1.3802312976 10.6962838982 5.2463827685




  GWAS USING LINEAR MIXED MODELS