Project measure / variable:   Auwerx1   temp_t5_CD

ID, description, units MPD:111292   temp_t5_CD   body temperature (rectal) in cold (4°C) room, 5h exposed to cold   [°C]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 5h exposed to cold CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means34.986   °C
Median of the strain means35.08   °C
SD of the strain means± 1.0001
Coefficient of variation (CV)0.0286
Min–max range of strain means32.46   –   36.74   °C
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 251.9089 4.4984 6.2832 < 0.0001
Residuals 195 139.6072 0.7159


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 34.04 1.0668   5 0.47707 0.0313 32.5, 35.4 -0.95
BXD100 m 35.3 0.98489   3 0.56862 0.0279 34.5, 36.4 0.31
BXD101 m 34.675 0.61847   4 0.30923 0.0178 33.8, 35.2 -0.31
BXD11 m 35.167 1.8903   3 1.0914 0.0538 33.7, 37.3 0.18
BXD12 m 36.24 0.65803   5 0.29428 0.0182 35.2, 37.0 1.25
BXD16 m 35.575 0.51235   4 0.25617 0.0144 35.1, 36.3 0.59
BXD2 m 35.625 0.73655   4 0.36827 0.0207 34.8, 36.5 0.64
BXD27 m 34.46 1.0164   5 0.45453 0.0295 33.3, 35.6 -0.53
BXD32 m 36.46 1.1283   5 0.50458 0.0309 35.0, 37.7 1.47
BXD34 m 34.55 0.92916   4 0.46458 0.0269 33.6, 35.8 -0.44
BXD39 m 35.4 0.70356   5 0.31464 0.0199 34.3, 36.0 0.41
BXD40 m 34.6 1.1358   3 0.65574 0.0328 33.3, 35.4 -0.39
BXD43 m 35.067 1.0116   3 0.58405 0.0288 33.9, 35.7 0.08
BXD44 m 34.933 0.77136   9 0.25712 0.0221 33.3, 35.7 -0.05
BXD45 m 36.16 0.63875   5 0.28566 0.0177 35.5, 37.1 1.17
BXD48 m 32.46 1.1104   5 0.49659 0.0342 31.2, 34.1 -2.53
BXD48a m 34.48 0.77589   5 0.34699 0.0225 33.7, 35.6 -0.51
BXD49 m 34.2 0.70711   4 0.35355 0.0207 33.5, 35.1 -0.79
BXD50 m 34.35 0.82664   4 0.41332 0.0241 33.2, 35.0 -0.64
BXD51 m 35.64 0.40373   5 0.18055 0.0113 35.2, 36.2 0.65
BXD53 m 33.2 0.43205   4 0.21602 0.013 32.6, 33.6 -1.79
BXD55 m 36.14 0.71972   5 0.32187 0.0199 35.1, 36.8 1.15
BXD56 m 34.15 1.3528   4 0.67639 0.0396 32.4, 35.7 -0.84
BXD6 m 35.36 0.11402   5 0.05099 0.0032 35.2, 35.5 0.37
BXD60 m 32.875 0.88835   4 0.44418 0.027 31.7, 33.7 -2.11
BXD61 m 35.867 0.60277   3 0.34801 0.0168 35.3, 36.5 0.88
BXD62 m 36.225 1.3226   4 0.66128 0.0365 35.0, 38.1 1.24
BXD63 m 35.425 1.1147   4 0.55734 0.0315 33.8, 36.2 0.44
BXD64 m 33.5 0.53541   4 0.26771 0.016 33.0, 34.1 -1.49
BXD65 m 34.975 0.9535   4 0.47675 0.0273 34.0, 36.2 -0.01
BXD65a m 35.82 1.3424   5 0.60033 0.0375 34.0, 37.6 0.83
BXD65b m 34.65 0.1291   4 0.06455 0.0037 34.5, 34.8 -0.34
BXD66 m 34.06 0.54129   5 0.24207 0.0159 33.4, 34.8 -0.93
BXD67 m 34.56 0.39115   5 0.17493 0.0113 34.1, 35.0 -0.43
BXD68 m 34.85 0.81854   4 0.40927 0.0235 33.8, 35.8 -0.14
BXD69 m 34.48 1.0305   5 0.46087 0.0299 33.1, 35.5 -0.51
BXD70 m 35.7 0.21602   4 0.10801 0.0061 35.4, 35.9 0.71
BXD71 m 32.88 0.45497   5 0.20347 0.0138 32.4, 33.4 -2.11
BXD73 m 34.55 0.67577   4 0.33789 0.0196 33.8, 35.3 -0.44
BXD73a m 35.58 0.35637   5 0.15937 0.01 35.0, 35.9 0.59
BXD73b m 35.16 0.75697   5 0.33853 0.0215 34.1, 36.0 0.17
BXD75 m 36.74 0.64265   5 0.2874 0.0175 35.9, 37.6 1.75
BXD77 m 35.78 0.40866   5 0.18276 0.0114 35.4, 36.3 0.79
BXD79 m 35.58 0.84083   5 0.37603 0.0236 34.5, 36.6 0.59
BXD8 m 36.325 1.0905   4 0.54524 0.03 34.9, 37.4 1.34
BXD81 m 33.6 0.94868   4 0.47434 0.0282 32.4, 34.7 -1.39
BXD83 m 35.767 0.35119   3 0.20276 0.0098 35.4, 36.1 0.78
BXD84 m 33.8 1.8221   4 0.91104 0.0539 31.3, 35.5 -1.19
BXD85 m 34.32 1.0134   5 0.45321 0.0295 33.1, 35.9 -0.67
BXD87 m 36.02 0.22804   5 0.10198 0.0063 35.7, 36.3 1.03
BXD89 m 34.9 0.43205   4 0.21602 0.0124 34.5, 35.5 -0.09
BXD90 m 35.125 0.29861   4 0.1493 0.0085 34.8, 35.5 0.14
BXD95 m 35.525 0.7719   4 0.38595 0.0217 34.8, 36.6 0.54
BXD98 m 33.45 1.5   4 0.75 0.0448 31.8, 35.4 -1.54
BXD99 m 35.08 0.74632   5 0.33377 0.0213 34.6, 36.4 0.09
C57BL/6J m 36.46 0.78613   5 0.35157 0.0216 35.8, 37.8 1.47
DBA/2J m 36.325 0.12583   4 0.06292 0.0035 36.2, 36.5 1.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 34.04 0.3784003668 34.7862827364 33.2937172636
BXD100 m 35.3 0.488512773 36.2634468699 34.3365531301
BXD101 m 34.675 0.4230644715 35.5093694646 33.8406305354
BXD11 m 35.1666666667 0.488512773 36.1301135366 34.2032197967
BXD12 m 36.24 0.3784003668 36.9862827364 35.4937172636
BXD16 m 35.575 0.4230644715 36.4093694646 34.7406305354
BXD2 m 35.625 0.4230644715 36.4593694646 34.7906305354
BXD27 m 34.46 0.3784003668 35.2062827364 33.7137172636
BXD32 m 36.46 0.3784003668 37.2062827364 35.7137172636
BXD34 m 34.55 0.4230644715 35.3843694646 33.7156305354
BXD39 m 35.4 0.3784003668 36.1462827364 34.6537172636
BXD40 m 34.6 0.488512773 35.5634468699 33.6365531301
BXD43 m 35.0666666667 0.488512773 36.0301135366 34.1032197967
BXD44 m 34.9333333333 0.282042981 35.489579643 34.3770870236
BXD45 m 36.16 0.3784003668 36.9062827364 35.4137172636
BXD48 m 32.46 0.3784003668 33.2062827364 31.7137172636
BXD48a m 34.48 0.3784003668 35.2262827364 33.7337172636
BXD49 m 34.2 0.4230644715 35.0343694646 33.3656305354
BXD50 m 34.35 0.4230644715 35.1843694646 33.5156305354
BXD51 m 35.64 0.3784003668 36.3862827364 34.8937172636
BXD53 m 33.2 0.4230644715 34.0343694646 32.3656305354
BXD55 m 36.14 0.3784003668 36.8862827364 35.3937172636
BXD56 m 34.15 0.4230644715 34.9843694646 33.3156305354
BXD6 m 35.36 0.3784003668 36.1062827364 34.6137172636
BXD60 m 32.875 0.4230644715 33.7093694646 32.0406305354
BXD61 m 35.8666666667 0.488512773 36.8301135366 34.9032197967
BXD62 m 36.225 0.4230644715 37.0593694646 35.3906305354
BXD63 m 35.425 0.4230644715 36.2593694646 34.5906305354
BXD64 m 33.5 0.4230644715 34.3343694646 32.6656305354
BXD65 m 34.975 0.4230644715 35.8093694646 34.1406305354
BXD65a m 35.82 0.3784003668 36.5662827364 35.0737172636
BXD65b m 34.65 0.4230644715 35.4843694646 33.8156305354
BXD66 m 34.06 0.3784003668 34.8062827364 33.3137172636
BXD67 m 34.56 0.3784003668 35.3062827364 33.8137172636
BXD68 m 34.85 0.4230644715 35.6843694646 34.0156305354
BXD69 m 34.48 0.3784003668 35.2262827364 33.7337172636
BXD70 m 35.7 0.4230644715 36.5343694646 34.8656305354
BXD71 m 32.88 0.3784003668 33.6262827364 32.1337172636
BXD73 m 34.55 0.4230644715 35.3843694646 33.7156305354
BXD73a m 35.58 0.3784003668 36.3262827364 34.8337172636
BXD73b m 35.16 0.3784003668 35.9062827364 34.4137172636
BXD75 m 36.74 0.3784003668 37.4862827364 35.9937172636
BXD77 m 35.78 0.3784003668 36.5262827364 35.0337172636
BXD79 m 35.58 0.3784003668 36.3262827364 34.8337172636
BXD8 m 36.325 0.4230644715 37.1593694646 35.4906305354
BXD81 m 33.6 0.4230644715 34.4343694646 32.7656305354
BXD83 m 35.7666666667 0.488512773 36.7301135366 34.8032197967
BXD84 m 33.8 0.4230644715 34.6343694646 32.9656305354
BXD85 m 34.32 0.3784003668 35.0662827364 33.5737172636
BXD87 m 36.02 0.3784003668 36.7662827364 35.2737172636
BXD89 m 34.9 0.4230644715 35.7343694646 34.0656305354
BXD90 m 35.125 0.4230644715 35.9593694646 34.2906305354
BXD95 m 35.525 0.4230644715 36.3593694646 34.6906305354
BXD98 m 33.45 0.4230644715 34.2843694646 32.6156305354
BXD99 m 35.08 0.3784003668 35.8262827364 34.3337172636
C57BL/6J m 36.46 0.3784003668 37.2062827364 35.7137172636
DBA/2J m 36.325 0.4230644715 37.1593694646 35.4906305354




  GWAS USING LINEAR MIXED MODELS