Project measure / variable:   Auwerx1   temp_t0_HFD

ID, description, units MPD:111283   temp_t0_HFD   body temperature (rectal) in cold (4°C) room, 0h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 0h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means37.3   °C
Median of the strain means37.242   °C
SD of the strain means± 0.50503
Coefficient of variation (CV)0.0135
Min–max range of strain means35.96   –   38.24   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 66.8286 1.2151 8.9431 < 0.0001
Residuals 197 26.7657 0.1359


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 37.22 0.16432   5 0.07348 0.0044 37.1, 37.4 -0.16
BXD100 m 37.94 0.33615   5 0.15033 0.0089 37.7, 38.5 1.27
BXD101 m 37.075 0.09574   4 0.04787 0.0026 37.0, 37.2 -0.44
BXD11 m 37.58 0.43818   5 0.19596 0.0117 36.8, 37.8 0.56
BXD12 m 38.14 0.498   5 0.22271 0.0131 37.4, 38.8 1.66
BXD16 m 37.26 0.36469   5 0.1631 0.0098 36.8, 37.7 -0.08
BXD2 m 37.02 0.26833   5 0.12 0.0072 36.6, 37.3 -0.55
BXD27 m 36.55 0.34157   4 0.17078 0.0093 36.1, 36.9 -1.48
BXD32 m 37.633 0.23094   3 0.13333 0.0061 37.5, 37.9 0.66
BXD34 m 37.0 0.44721   5 0.2 0.0121 36.5, 37.7 -0.59
BXD39 m 37.2 0.1   5 0.04472 0.0027 37.1, 37.3 -0.2
BXD40 m 37.4 0.45461   4 0.2273 0.0122 37.0, 38.0 0.2
BXD43 m 37.4 0.55678   3 0.32146 0.0149 36.8, 37.9 0.2
BXD44 m 36.811 0.3855   9 0.1285 0.0105 36.1, 37.4 -0.97
BXD45 m 36.36 0.36469   5 0.1631 0.01 35.9, 36.9 -1.86
BXD48 m 37.18 0.21679   5 0.09695 0.0058 37.0, 37.5 -0.24
BXD48a m 37.1 0.45826   3 0.26458 0.0124 36.7, 37.6 -0.4
BXD49 m 37.9 0.24495   5 0.10954 0.0065 37.6, 38.2 1.19
BXD50 m 37.08 0.52631   5 0.23537 0.0142 36.4, 37.7 -0.43
BXD51 m 36.65 0.33166   4 0.16583 0.009 36.3, 37.1 -1.29
BXD53 m 37.58 0.26833   5 0.12 0.0071 37.3, 38.0 0.56
BXD55 m 37.225 0.55   4 0.275 0.0148 36.5, 37.7 -0.15
BXD56 m 37.667 0.32146   3 0.18559 0.0085 37.3, 37.9 0.73
BXD6 m 37.08 0.40866   5 0.18276 0.011 36.8, 37.8 -0.43
BXD60 m 35.96 0.498   5 0.22271 0.0138 35.3, 36.5 -2.65
BXD61 m 37.82 0.14832   5 0.06633 0.0039 37.6, 38.0 1.03
BXD62 m 36.525 0.27538   4 0.13769 0.0075 36.2, 36.8 -1.53
BXD63 m 36.95 0.6364   2   0.45 0.0172 36.5, 37.4 -0.69
BXD64 m 37.275 0.1893   4 0.09465 0.0051 37.0, 37.4 -0.05
BXD65 m 37.7 0.24495   4 0.12247 0.0065 37.4, 37.9 0.79
BXD65a m 37.525 0.37749   4 0.18875 0.0101 37.1, 38.0 0.45
BXD66 m 37.26 0.27019   5 0.12083 0.0073 37.0, 37.7 -0.08
BXD67 m 37.42 0.55408   5 0.24779 0.0148 36.8, 38.0 0.24
BXD68 m 36.95 0.31091   4 0.15546 0.0084 36.6, 37.3 -0.69
BXD69 m 36.78 0.39623   5 0.1772 0.0108 36.2, 37.2 -1.03
BXD70 m 37.9 0.4761   4 0.23805 0.0126 37.4, 38.4 1.19
BXD71 m 37.2 0.7   3 0.40415 0.0188 36.7, 38.0 -0.2
BXD73 m 36.94 0.23022   5 0.10296 0.0062 36.7, 37.2 -0.71
BXD73a m 38.18 0.249   5 0.11136 0.0065 38.0, 38.6 1.74
BXD73b m 36.68 0.48683   5 0.21772 0.0133 36.2, 37.2 -1.23
BXD75 m 38.24 0.08944   5 0.04 0.0023 38.1, 38.3 1.86
BXD77 m 36.8 0.48477   5 0.21679 0.0132 36.4, 37.6 -0.99
BXD79 m 36.98 0.249   5 0.11136 0.0067 36.8, 37.3 -0.63
BXD8 m 37.1 0.3   5 0.13416 0.0081 36.8, 37.6 -0.4
BXD81 m 36.75 0.3   4 0.15 0.0082 36.6, 37.2 -1.09
BXD83 m 37.5 0.14142   4 0.07071 0.0038 37.3, 37.6 0.4
BXD84 m 37.3 0.52915   3 0.30551 0.0142 36.7, 37.7 0.0
BXD85 m 37.75 0.31091   4 0.15546 0.0082 37.5, 38.2 0.89
BXD87 m 37.96 0.47749   5 0.21354 0.0126 37.2, 38.4 1.31
BXD89 m 37.925 0.17078   4 0.08539 0.0045 37.7, 38.1 1.24
BXD90 m 37.275 0.27538   4 0.13769 0.0074 37.0, 37.6 -0.05
BXD95 m 36.9 0.18708   5 0.08367 0.0051 36.7, 37.1 -0.79
BXD98 m 37.08 0.26833   5 0.12 0.0072 36.9, 37.5 -0.43
BXD99 m 37.8 0.30822   5 0.13784 0.0082 37.4, 38.1 0.99
C57BL/6J m 38.22 0.45497   5 0.20347 0.0119 37.8, 38.9 1.82
DBA/2J m 38.08 0.59749   5 0.26721 0.0157 37.2, 38.8 1.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 37.22 0.1648433258 37.5450840666 36.8949159334
BXD100 m 37.94 0.1648433258 38.2650840666 37.6149159334
BXD101 m 37.075 0.184300441 37.4384550357 36.7115449643
BXD11 m 37.58 0.1648433258 37.9050840666 37.2549159334
BXD12 m 38.14 0.1648433258 38.4650840666 37.8149159334
BXD16 m 37.26 0.1648433258 37.5850840666 36.9349159334
BXD2 m 37.02 0.1648433258 37.3450840666 36.6949159334
BXD27 m 36.55 0.184300441 36.9134550357 36.1865449643
BXD32 m 37.6333333333 0.2128118185 38.0530150587 37.213651608
BXD34 m 37.0 0.1648433258 37.3250840666 36.6749159334
BXD39 m 37.2 0.1648433258 37.5250840666 36.8749159334
BXD40 m 37.4 0.184300441 37.7634550357 37.0365449643
BXD43 m 37.4 0.2128118185 37.8196817254 36.9803182746
BXD44 m 36.8111111111 0.1228669607 37.0534144682 36.568807754
BXD45 m 36.36 0.1648433258 36.6850840666 36.0349159334
BXD48 m 37.18 0.1648433258 37.5050840666 36.8549159334
BXD48a m 37.1 0.2128118185 37.5196817254 36.6803182746
BXD49 m 37.9 0.1648433258 38.2250840666 37.5749159334
BXD50 m 37.08 0.1648433258 37.4050840666 36.7549159334
BXD51 m 36.65 0.184300441 37.0134550357 36.2865449643
BXD53 m 37.58 0.1648433258 37.9050840666 37.2549159334
BXD55 m 37.225 0.184300441 37.5884550357 36.8615449643
BXD56 m 37.6666666667 0.2128118185 38.086348392 37.2469849413
BXD6 m 37.08 0.1648433258 37.4050840666 36.7549159334
BXD60 m 35.96 0.1648433258 36.2850840666 35.6349159334
BXD61 m 37.82 0.1648433258 38.1450840666 37.4949159334
BXD62 m 36.525 0.184300441 36.8884550357 36.1615449643
BXD63 m 36.95 0.2606401833 37.4640030408 36.4359969592
BXD64 m 37.275 0.184300441 37.6384550357 36.9115449643
BXD65 m 37.7 0.184300441 38.0634550357 37.3365449643
BXD65a m 37.525 0.184300441 37.8884550357 37.1615449643
BXD66 m 37.26 0.1648433258 37.5850840666 36.9349159334
BXD67 m 37.42 0.1648433258 37.7450840666 37.0949159334
BXD68 m 36.95 0.184300441 37.3134550357 36.5865449643
BXD69 m 36.78 0.1648433258 37.1050840666 36.4549159334
BXD70 m 37.9 0.184300441 38.2634550357 37.5365449643
BXD71 m 37.2 0.2128118185 37.6196817254 36.7803182746
BXD73 m 36.94 0.1648433258 37.2650840666 36.6149159334
BXD73a m 38.18 0.1648433258 38.5050840666 37.8549159334
BXD73b m 36.68 0.1648433258 37.0050840666 36.3549159334
BXD75 m 38.24 0.1648433258 38.5650840666 37.9149159334
BXD77 m 36.8 0.1648433258 37.1250840666 36.4749159334
BXD79 m 36.98 0.1648433258 37.3050840666 36.6549159334
BXD8 m 37.1 0.1648433258 37.4250840666 36.7749159334
BXD81 m 36.75 0.184300441 37.1134550357 36.3865449643
BXD83 m 37.5 0.184300441 37.8634550357 37.1365449643
BXD84 m 37.3 0.2128118185 37.7196817254 36.8803182746
BXD85 m 37.75 0.184300441 38.1134550357 37.3865449643
BXD87 m 37.96 0.1648433258 38.2850840666 37.6349159334
BXD89 m 37.925 0.184300441 38.2884550357 37.5615449643
BXD90 m 37.275 0.184300441 37.6384550357 36.9115449643
BXD95 m 36.9 0.1648433258 37.2250840666 36.5749159334
BXD98 m 37.08 0.1648433258 37.4050840666 36.7549159334
BXD99 m 37.8 0.1648433258 38.1250840666 37.4749159334
C57BL/6J m 38.22 0.1648433258 38.5450840666 37.8949159334
DBA/2J m 38.08 0.1648433258 38.4050840666 37.7549159334




  GWAS USING LINEAR MIXED MODELS