Project measure / variable:   Auwerx1   bw_coldtest_CD

ID, description, units MPD:111280   bw_coldtest_CD   body weight prior to cold response test, 21 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 21wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight prior to cold response test, 21 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means35.879   g
Median of the strain means35.255   g
SD of the strain means± 5.4342
Coefficient of variation (CV)0.1515
Min–max range of strain means26.503   –   50.67   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 7272.5623 129.8672 9.4805 < 0.0001
Residuals 197 2698.5727 13.6983


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 28.922 2.2824   5 1.0207 0.0789 26.41, 32.64 -1.28
BXD100 m 36.783 10.397   3 6.0026 0.2826 26.61, 47.39 0.17
BXD101 m 32.78 3.6815   4 1.8408 0.1123 28.36, 37.28 -0.57
BXD11 m 31.94 6.3122   3 3.6443 0.1976 26.06, 38.61 -0.72
BXD12 m 29.736 1.0491   5 0.46918 0.0353 28.88, 31.51 -1.13
BXD16 m 50.67 4.1609   4 2.0804 0.0821 44.58, 53.35 2.72
BXD2 m 36.735 1.866   4 0.933 0.0508 34.35, 38.91 0.16
BXD27 m 39.316 3.8782   5 1.7344 0.0986 35.36, 44.78 0.63
BXD32 m 34.32 2.4133   5 1.0793 0.0703 31.02, 37.77 -0.29
BXD34 m 35.242 0.85796   4 0.42898 0.0243 34.23, 36.31 -0.12
BXD39 m 44.45 1.8869   5 0.84387 0.0425 42.41, 47.12 1.58
BXD40 m 26.503 2.1711   3 1.2535 0.0819 24.47, 28.79 -1.73
BXD43 m 31.623 4.4691   3 2.5802 0.1413 27.56, 36.41 -0.78
BXD44 m 39.189 4.6418   9 1.5473 0.1184 33.11, 46.16 0.61
BXD45 m 31.712 1.5455   5 0.69116 0.0487 29.94, 33.67 -0.77
BXD48 m 37.496 5.2922   5 2.3668 0.1411 33.02, 46.66 0.3
BXD48a m 40.52 4.9255   5 2.2027 0.1216 35.66, 47.53 0.85
BXD49 m 37.578 1.4546   4 0.72731 0.0387 36.42, 39.64 0.31
BXD50 m 38.16 6.2874   4 3.1437 0.1648 29.4, 44.34 0.42
BXD51 m 34.508 3.2426   5 1.4501 0.094 32.2, 40.06 -0.25
BXD53 m 33.916 3.2575   5 1.4568 0.096 30.21, 38.87 -0.36
BXD55 m 31.76 2.4037   5 1.075 0.0757 28.43, 33.69 -0.76
BXD56 m 32.142 1.0041   4 0.50205 0.0312 30.71, 32.91 -0.69
BXD6 m 33.298 2.5667   5 1.1479 0.0771 29.95, 36.48 -0.47
BXD60 m 39.174 6.3943   5 2.8596 0.1632 28.45, 44.22 0.61
BXD61 m 33.45 1.9182   3 1.1074 0.0573 31.77, 35.54 -0.45
BXD62 m 31.895 2.472   4 1.236 0.0775 28.75, 34.02 -0.73
BXD63 m 37.872 3.4384   4 1.7192 0.0908 35.4, 42.8 0.37
BXD64 m 33.883 2.5699   4 1.2849 0.0758 31.74, 37.06 -0.37
BXD65 m 42.77 2.4686   4 1.2343 0.0577 39.34, 44.96 1.27
BXD65a m 44.24 0.43376   5 0.19398 0.0098 43.83, 44.95 1.54
BXD65b m 46.062 1.6494   4 0.8247 0.0358 44.33, 48.27 1.87
BXD66 m 46.07 5.4153   5 2.4218 0.1175 37.52, 51.37 1.88
BXD67 m 36.814 6.3901   5 2.8578 0.1736 29.79, 43.66 0.17
BXD68 m 38.945 5.8031   4 2.9015 0.149 34.0, 45.81 0.56
BXD69 m 40.598 1.3288   5 0.59427 0.0327 38.78, 42.07 0.87
BXD70 m 31.21 8.0425   4 4.0213 0.2577 26.31, 43.12 -0.86
BXD71 m 36.728 4.3994   5 1.9675 0.1198 32.02, 42.77 0.16
BXD73 m 33.295 6.1618   4 3.0809 0.1851 28.94, 42.33 -0.48
BXD73a m 43.888 1.7865   5 0.79895 0.0407 42.06, 45.94 1.47
BXD73b m 42.896 2.9025   5 1.2981 0.0677 40.16, 46.56 1.29
BXD75 m 37.168 3.0669   5 1.3716 0.0825 33.28, 41.07 0.24
BXD77 m 32.42 3.1307   5 1.4001 0.0966 28.08, 34.99 -0.64
BXD79 m 36.224 2.3785   5 1.0637 0.0657 34.15, 39.78 0.06
BXD8 m 27.602 1.3148   4 0.65739 0.0476 25.91, 29.12 -1.52
BXD81 m 27.515 4.7199   4 2.36 0.1715 22.07, 32.45 -1.54
BXD83 m 28.6 2.1884   3 1.2635 0.0765 26.94, 31.08 -1.34
BXD84 m 36.665 2.7145   4 1.3572 0.074 32.84, 39.23 0.14
BXD85 m 46.348 2.5589   5 1.1444 0.0552 42.46, 49.5 1.93
BXD87 m 26.822 1.4019   5 0.62694 0.0523 24.45, 28.13 -1.67
BXD89 m 35.255 1.197   4 0.59848 0.034 33.77, 36.7 -0.11
BXD90 m 29.4 1.112   4 0.55598 0.0378 28.26, 30.52 -1.19
BXD95 m 34.197 4.3928   4 2.1964 0.1285 28.84, 39.6 -0.31
BXD98 m 35.425 2.9192   4 1.4596 0.0824 31.07, 37.3 -0.08
BXD99 m 38.52 1.3933   5 0.62311 0.0362 37.4, 40.93 0.49
C57BL/6J m 30.818 1.0485   5 0.4689 0.034 29.29, 31.75 -0.93
DBA/2J m 33.045 3.6095   4 1.8047 0.1092 28.27, 36.15 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 28.922 1.6551941714 32.1861737223 25.6578262777
BXD100 m 36.7833333333 2.1368464869 40.9973634885 32.5693031782
BXD101 m 32.78 1.8505633416 36.4294571667 29.1305428333
BXD11 m 31.94 2.1368464869 36.1540301552 27.7259698448
BXD12 m 29.736 1.6551941714 33.0001737223 26.4718262777
BXD16 m 50.675 1.8505633416 54.3244571667 47.0255428333
BXD2 m 36.735 1.8505633416 40.3844571667 33.0855428333
BXD27 m 39.316 1.6551941714 42.5801737223 36.0518262777
BXD32 m 34.32 1.6551941714 37.5841737223 31.0558262777
BXD34 m 35.2425 1.8505633416 38.8919571667 31.5930428333
BXD39 m 44.45 1.6551941714 47.7141737223 41.1858262777
BXD40 m 26.5033333333 2.1368464869 30.7173634885 22.2893031782
BXD43 m 31.6233333333 2.1368464869 35.8373634885 27.4093031782
BXD44 m 39.1888888889 1.2337088944 41.6218603333 36.7559174444
BXD45 m 31.712 1.6551941714 34.9761737223 28.4478262777
BXD48 m 37.496 1.6551941714 40.7601737223 34.2318262777
BXD48a m 40.52 1.6551941714 43.7841737223 37.2558262777
BXD49 m 37.5775 1.8505633416 41.2269571667 33.9280428333
BXD50 m 38.16 1.8505633416 41.8094571667 34.5105428333
BXD51 m 34.508 1.6551941714 37.7721737223 31.2438262777
BXD53 m 33.916 1.6551941714 37.1801737223 30.6518262777
BXD55 m 31.76 1.6551941714 35.0241737223 28.4958262777
BXD56 m 32.1425 1.8505633416 35.7919571667 28.4930428333
BXD6 m 33.298 1.6551941714 36.5621737223 30.0338262777
BXD60 m 39.174 1.6551941714 42.4381737223 35.9098262777
BXD61 m 33.45 2.1368464869 37.6640301552 29.2359698448
BXD62 m 31.895 1.8505633416 35.5444571667 28.2455428333
BXD63 m 37.8725 1.8505633416 41.5219571667 34.2230428333
BXD64 m 33.8825 1.8505633416 37.5319571667 30.2330428333
BXD65 m 42.77 1.8505633416 46.4194571667 39.1205428333
BXD65a m 44.24 1.6551941714 47.5041737223 40.9758262777
BXD65b m 46.0625 1.8505633416 49.7119571667 42.4130428333
BXD66 m 46.07 1.6551941714 49.3341737223 42.8058262777
BXD67 m 36.814 1.6551941714 40.0781737223 33.5498262777
BXD68 m 38.945 1.8505633416 42.5944571667 35.2955428333
BXD69 m 40.598 1.6551941714 43.8621737223 37.3338262777
BXD70 m 31.21 1.8505633416 34.8594571667 27.5605428333
BXD71 m 36.728 1.6551941714 39.9921737223 33.4638262777
BXD73 m 33.295 1.8505633416 36.9444571667 29.6455428333
BXD73a m 43.888 1.6551941714 47.1521737223 40.6238262777
BXD73b m 42.896 1.6551941714 46.1601737223 39.6318262777
BXD75 m 37.168 1.6551941714 40.4321737223 33.9038262777
BXD77 m 32.42 1.6551941714 35.6841737223 29.1558262777
BXD79 m 36.224 1.6551941714 39.4881737223 32.9598262777
BXD8 m 27.6025 1.8505633416 31.2519571667 23.9530428333
BXD81 m 27.515 1.8505633416 31.1644571667 23.8655428333
BXD83 m 28.6 2.1368464869 32.8140301552 24.3859698448
BXD84 m 36.665 1.8505633416 40.3144571667 33.0155428333
BXD85 m 46.348 1.6551941714 49.6121737223 43.0838262777
BXD87 m 26.822 1.6551941714 30.0861737223 23.5578262777
BXD89 m 35.255 1.8505633416 38.9044571667 31.6055428333
BXD90 m 29.4 1.8505633416 33.0494571667 25.7505428333
BXD95 m 34.1975 1.8505633416 37.8469571667 30.5480428333
BXD98 m 35.425 1.8505633416 39.0744571667 31.7755428333
BXD99 m 38.52 1.6551941714 41.7841737223 35.2558262777
C57BL/6J m 30.818 1.6551941714 34.0821737223 27.5538262777
DBA/2J m 33.045 1.8505633416 36.6944571667 29.3955428333




  GWAS USING LINEAR MIXED MODELS