Project measure / variable:   Auwerx1   bw_presac_HFD

ID, description, units MPD:111223   bw_presac_HFD   body weight at pre-sacrifice, 29 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   53 strains     sex: m     age: 29wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at pre-sacrifice, 29 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested53 strains
Mean of the strain means50.83   g
Median of the strain means50.94   g
SD of the strain means± 8.0233
Coefficient of variation (CV)0.1579
Min–max range of strain means33.65   –   66.45   g
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 52 15352.3036 295.2366 11.0098 < 0.0001
Residuals 178 4773.2137 26.8158


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 40.71 4.6507   5 2.0798 0.1142 33.16, 44.87 -1.26
BXD100 m 58.23 5.7379   5 2.5661 0.0985 50.86, 64.69 0.92
BXD11 m 58.02 4.7127   4 2.3563 0.0812 51.76, 62.98 0.9
BXD12 m 34.672 3.686   5 1.6484 0.1063 29.28, 38.03 -2.01
BXD16 m 61.12 4.0465   5 1.8097 0.0662 56.26, 65.4 1.28
BXD2 m 48.272 8.6856   5 3.8843 0.1799 34.6, 57.1 -0.32
BXD27 m 43.005 3.6502   4 1.8251 0.0849 39.01, 47.06 -0.97
BXD32 m 51.97 5.5943   3 3.2299 0.1076 48.14, 58.39 0.14
BXD34 m 39.094 7.1158   5 3.1823 0.182 32.2, 49.01 -1.46
BXD39 m 48.24 0.9046   5 0.40455 0.0188 47.15, 49.44 -0.32
BXD40 m 33.65 5.1576   4 2.5788 0.1533 29.19, 40.44 -2.14
BXD43 m 52.68 2.0122   3 1.1617 0.0382 51.41, 55.0 0.23
BXD44 m 65.91 3.475   7 1.3134 0.0527 60.42, 70.98 1.88
BXD45 m 47.112 4.5658   5 2.0419 0.0969 39.7, 51.77 -0.46
BXD48 m 57.25 8.1046   5 3.6245 0.1416 45.07, 65.12 0.8
BXD48a m 63.04 5.0572   3 2.9198 0.0802 59.23, 68.78 1.52
BXD49 m 54.43 15.848   4 7.9242 0.2912 40.09, 73.8 0.45
BXD50 m 50.73 2.0862   5 0.93298 0.0411 47.35, 53.06 -0.01
BXD51 m 66.45 5.5809   4 2.7905 0.084 60.28, 73.66 1.95
BXD53 m 50.64 2.318   5 1.0366 0.0458 47.5, 54.0 -0.02
BXD55 m 45.267 2.816   4 1.408 0.0622 42.36, 47.98 -0.69
BXD56 m 44.505 1.0112   2   0.715 0.0227 43.79, 45.22 -0.79
BXD6 m 49.644 6.5493   5 2.9289 0.1319 39.48, 56.82 -0.15
BXD60 m 65.71 2.7901   5 1.2478 0.0425 61.0, 67.65 1.86
BXD62 m 47.53 1.5995   4 0.79973 0.0337 46.0, 49.28 -0.41
BXD63 m 47.865 0.14849   2   0.105 0.0031 47.76, 47.97 -0.37
BXD64 m 51.47 6.3346   4 3.1673 0.1231 43.44, 58.08 0.08
BXD65 m 65.64 2.903   4 1.4515 0.0442 63.17, 69.67 1.85
BXD65a m 54.99 8.2551   4 4.1276 0.1501 45.3, 64.65 0.52
BXD66 m 62.5 5.2682   5 2.356 0.0843 53.22, 65.98 1.45
BXD67 m 55.73 3.7472   5 1.6758 0.0672 51.0, 60.13 0.61
BXD68 m 43.928 5.5459   4 2.7729 0.1263 36.02, 48.8 -0.86
BXD69 m 40.81 1.1556   5 0.51679 0.0283 39.03, 41.74 -1.25
BXD70 m 50.94 2.9639   3 1.7112 0.0582 48.22, 54.1 0.01
BXD71 m 56.3 5.3352   3 3.0803 0.0948 51.44, 62.01 0.68
BXD73 m 45.613 3.8415   4 1.9207 0.0842 40.14, 49.01 -0.65
BXD73a m 49.01 2.2117   5 0.9891 0.0451 46.24, 51.13 -0.23
BXD73b m 51.1 2.4122   5 1.0788 0.0472 48.37, 53.69 0.03
BXD75 m 47.704 3.3556   5 1.5007 0.0703 43.13, 51.76 -0.39
BXD77 m 44.942 5.5689   5 2.4905 0.1239 38.9, 50.97 -0.73
BXD79 m 51.19 4.3882   5 1.9625 0.0857 44.76, 55.44 0.05
BXD8 m 39.284 5.1608   5 2.308 0.1314 31.64, 45.27 -1.44
BXD81 m 52.32 2.2727   3 1.3121 0.0434 49.76, 54.1 0.19
BXD83 m 38.61 4.7062   4 2.3531 0.1219 31.85, 42.55 -1.52
BXD84 m 57.12 10.654   3 6.1513 0.1865 50.01, 69.37 0.78
BXD85 m 58.09 2.9028   4 1.4514 0.05 54.99, 60.91 0.91
BXD87 m 38.44 2.0667   5 0.92426 0.0538 35.6, 40.89 -1.54
BXD89 m 46.473 2.2842   4 1.1421 0.0492 44.66, 49.71 -0.54
BXD90 m 51.56 7.2378   4 3.6189 0.1404 46.96, 62.35 0.09
BXD95 m 55.65 8.6899   5 3.8863 0.1562 45.65, 64.57 0.6
BXD98 m 55.8 3.2023   5 1.4321 0.0574 50.5, 58.63 0.62
BXD99 m 53.46 4.067   5 1.8188 0.0761 49.26, 57.62 0.33
DBA/2J m 49.384 2.3621   5 1.0563 0.0478 46.86, 52.07 -0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 40.71 2.3158500533 45.280054236 36.139945764
BXD100 m 58.23 2.3158500533 62.800054236 53.659945764
BXD11 m 58.0225 2.5891990725 63.1319759663 52.9130240337
BXD12 m 34.672 2.3158500533 39.242054236 30.101945764
BXD16 m 61.118 2.3158500533 65.688054236 56.547945764
BXD2 m 48.272 2.3158500533 52.842054236 43.701945764
BXD27 m 43.005 2.5891990725 48.1144759663 37.8955240337
BXD32 m 51.97 2.989749563 57.8699146491 46.0700853509
BXD34 m 39.094 2.3158500533 43.664054236 34.523945764
BXD39 m 48.24 2.3158500533 52.810054236 43.669945764
BXD40 m 33.65 2.5891990725 38.7594759663 28.5405240337
BXD43 m 52.68 2.989749563 58.5799146491 46.7800853509
BXD44 m 65.9071428571 1.9572505259 69.769543639 62.0447420753
BXD45 m 47.112 2.3158500533 51.682054236 42.541945764
BXD48 m 57.248 2.3158500533 61.818054236 52.677945764
BXD48a m 63.0433333333 2.989749563 68.9432479824 57.1434186843
BXD49 m 54.43 2.5891990725 59.5394759663 49.3205240337
BXD50 m 50.732 2.3158500533 55.302054236 46.161945764
BXD51 m 66.4525 2.5891990725 71.5619759663 61.3430240337
BXD53 m 50.64 2.3158500533 55.210054236 46.069945764
BXD55 m 45.2675 2.5891990725 50.3769759663 40.1580240337
BXD56 m 44.505 3.661680444 51.7308902081 37.2791097919
BXD6 m 49.644 2.3158500533 54.214054236 45.073945764
BXD60 m 65.708 2.3158500533 70.278054236 61.137945764
BXD62 m 47.53 2.5891990725 52.6394759663 42.4205240337
BXD63 m 47.865 3.661680444 55.0908902081 40.6391097919
BXD64 m 51.4725 2.5891990725 56.5819759663 46.3630240337
BXD65 m 65.635 2.5891990725 70.7444759663 60.5255240337
BXD65a m 54.99 2.5891990725 60.0994759663 49.8805240337
BXD66 m 62.496 2.3158500533 67.066054236 57.925945764
BXD67 m 55.732 2.3158500533 60.302054236 51.161945764
BXD68 m 43.9275 2.5891990725 49.0369759663 38.8180240337
BXD69 m 40.81 2.3158500533 45.380054236 36.239945764
BXD70 m 50.9433333333 2.989749563 56.8432479824 45.0434186843
BXD71 m 56.3033333333 2.989749563 62.2032479824 50.4034186843
BXD73 m 45.6125 2.5891990725 50.7219759663 40.5030240337
BXD73a m 49.01 2.3158500533 53.580054236 44.439945764
BXD73b m 51.1 2.3158500533 55.670054236 46.529945764
BXD75 m 47.704 2.3158500533 52.274054236 43.133945764
BXD77 m 44.942 2.3158500533 49.512054236 40.371945764
BXD79 m 51.192 2.3158500533 55.762054236 46.621945764
BXD8 m 39.284 2.3158500533 43.854054236 34.713945764
BXD81 m 52.32 2.989749563 58.2199146491 46.4200853509
BXD83 m 38.61 2.5891990725 43.7194759663 33.5005240337
BXD84 m 57.12 2.989749563 63.0199146491 51.2200853509
BXD85 m 58.085 2.5891990725 63.1944759663 52.9755240337
BXD87 m 38.44 2.3158500533 43.010054236 33.869945764
BXD89 m 46.4725 2.5891990725 51.5819759663 41.3630240337
BXD90 m 51.56 2.5891990725 56.6694759663 46.4505240337
BXD95 m 55.65 2.3158500533 60.220054236 51.079945764
BXD98 m 55.804 2.3158500533 60.374054236 51.233945764
BXD99 m 53.46 2.3158500533 58.030054236 48.889945764
DBA/2J m 49.384 2.3158500533 53.954054236 44.813945764




  GWAS USING LINEAR MIXED MODELS