Project measure / variable:   Auwerx1   bw_presac_CD

ID, description, units MPD:111222   bw_presac_CD   body weight at pre-sacrifice, 29 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   55 strains     sex: m     age: 29wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at pre-sacrifice, 29 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested55 strains
Mean of the strain means37.787   g
Median of the strain means36.21   g
SD of the strain means± 6.1055
Coefficient of variation (CV)0.1616
Min–max range of strain means27.143   –   53.17   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 54 8649.1578 160.1696 9.5036 < 0.0001
Residuals 183 3084.1936 16.8535


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 31.326 3.6783   5 1.645 0.1174 28.54, 37.5 -1.06
BXD100 m 43.81 10.092   3 5.8265 0.2304 33.23, 53.33 0.99
BXD101 m 32.242 3.2275   4 1.6137 0.1001 28.25, 35.84 -0.91
BXD11 m 34.98 5.2326   2   3.7 0.1496 31.28, 38.68 -0.46
BXD12 m 30.408 1.5865   5 0.70952 0.0522 27.87, 31.86 -1.21
BXD16 m 53.17 2.4823   4 1.2411 0.0467 50.26, 55.85 2.52
BXD2 m 38.517 1.5393   3 0.88871 0.04 36.81, 39.8 0.12
BXD27 m 36.21 3.181   5 1.4226 0.0878 31.47, 39.62 -0.26
BXD32 m 36.086 2.5432   5 1.1374 0.0705 33.65, 39.74 -0.28
BXD34 m 38.038 1.3301   4 0.66507 0.035 36.82, 39.71 0.04
BXD39 m 46.038 2.2511   5 1.0067 0.0489 44.28, 49.88 1.35
BXD40 m 27.143 0.38004   3 0.21942 0.014 26.71, 27.42 -1.74
BXD43 m 34.02 3.4258   3 1.9779 0.1007 31.12, 37.8 -0.62
BXD44 m 38.822 4.6095   9 1.5365 0.1187 31.38, 44.39 0.17
BXD45 m 33.89 2.8962   5 1.2952 0.0855 30.95, 38.19 -0.64
BXD48 m 39.164 2.9262   5 1.3086 0.0747 36.21, 43.89 0.23
BXD48a m 47.184 5.2451   5 2.3457 0.1112 40.87, 53.04 1.54
BXD49 m 41.62 1.8169   4 0.90843 0.0437 40.05, 44.13 0.63
BXD50 m 35.962 3.6682   4 1.8341 0.102 30.65, 39.06 -0.3
BXD51 m 37.727 7.6536   4 3.8268 0.2029 33.31, 49.19 -0.01
BXD53 m 35.9 5.5317   5 2.4739 0.1541 32.0, 45.4 -0.31
BXD55 m 32.002 2.6649   5 1.1918 0.0833 27.75, 34.23 -0.95
BXD56 m 34.713 1.5827   3 0.91377 0.0456 33.08, 36.24 -0.5
BXD6 m 36.338 3.5295   5 1.5784 0.0971 32.24, 41.49 -0.24
BXD60 m 45.336 6.1702   5 2.7594 0.1361 34.87, 50.73 1.24
BXD62 m 33.855 3.7481   4 1.874 0.1107 29.95, 37.44 -0.64
BXD63 m 36.647 2.0087   3 1.1597 0.0548 34.46, 38.41 -0.19
BXD64 m 34.75 1.3371   4 0.66856 0.0385 32.92, 36.04 -0.5
BXD65 m 49.188 3.1441   4 1.572 0.0639 45.77, 52.66 1.87
BXD65a m 47.126 0.82118   5 0.36724 0.0174 46.13, 48.03 1.53
BXD65b m 51.47 2.1605   4 1.0803 0.042 49.36, 54.4 2.24
BXD66 m 49.528 4.4834   5 2.005 0.0905 43.38, 55.46 1.92
BXD67 m 39.176 7.9979   5 3.5768 0.2042 30.08, 48.6 0.23
BXD68 m 43.233 7.394   3 4.2689 0.171 34.72, 48.05 0.89
BXD69 m 40.242 1.5343   5 0.68618 0.0381 38.24, 42.44 0.4
BXD70 m 31.96 8.6565   4 4.3282 0.2709 27.05, 44.91 -0.95
BXD71 m 39.178 3.5762   4 1.7881 0.0913 35.88, 43.83 0.23
BXD73 m 33.627 5.3611   4 2.6806 0.1594 30.16, 41.62 -0.68
BXD73a m 43.812 2.0532   5 0.91823 0.0469 40.83, 46.32 0.99
BXD73b m 40.238 4.6304   5 2.0708 0.1151 35.23, 46.37 0.4
BXD75 m 35.41 5.1344   5 2.2962 0.145 29.07, 41.61 -0.39
BXD77 m 33.49 4.4024   5 1.9688 0.1315 27.62, 37.62 -0.7
BXD79 m 39.53 2.9539   5 1.321 0.0747 34.92, 42.42 0.29
BXD8 m 30.443 2.6795   4 1.3397 0.088 27.98, 34.24 -1.2
BXD81 m 27.785 5.8748   4 2.9374 0.2114 20.51, 34.3 -1.64
BXD83 m 30.24 1.7352   3 1.0018 0.0574 28.52, 31.99 -1.24
BXD84 m 37.557 3.1747   3 1.8329 0.0845 33.9, 39.61 -0.04
BXD85 m 47.856 3.6888   5 1.6497 0.0771 41.82, 51.86 1.65
BXD87 m 28.412 1.9019   5 0.85056 0.0669 26.3, 31.04 -1.54
BXD89 m 35.962 2.0524   4 1.0262 0.0571 33.79, 38.5 -0.3
BXD90 m 34.325 3.7966   4 1.8983 0.1106 31.15, 39.26 -0.57
BXD95 m 35.44 5.2856   4 2.6428 0.1491 28.31, 39.77 -0.38
BXD98 m 38.41 4.9511   4 2.4756 0.1289 31.11, 42.12 0.1
BXD99 m 33.862 1.3   5 0.58139 0.0384 31.96, 35.17 -0.64
DBA/2J m 34.912 2.5823   4 1.2911 0.074 31.55, 37.78 -0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 31.326 1.8359475571 34.9483464057 27.7036535943
BXD100 m 43.81 2.3701981043 48.4864291011 39.1335708989
BXD101 m 32.2425 2.0526517704 36.2924064006 28.1925935994
BXD11 m 34.98 2.9028879725 40.707432558 29.252567442
BXD12 m 30.408 1.8359475571 34.0303464057 26.7856535943
BXD16 m 53.17 2.0526517704 57.2199064006 49.1200935994
BXD2 m 38.5166666667 2.3701981043 43.1930957678 33.8402375656
BXD27 m 36.21 1.8359475571 39.8323464057 32.5876535943
BXD32 m 36.086 1.8359475571 39.7083464057 32.4636535943
BXD34 m 38.0375 2.0526517704 42.0874064006 33.9875935994
BXD39 m 46.038 1.8359475571 49.6603464057 42.4156535943
BXD40 m 27.1433333333 2.3701981043 31.8197624344 22.4669042322
BXD43 m 34.02 2.3701981043 38.6964291011 29.3435708989
BXD44 m 38.8222222222 1.3684345136 41.5221598226 36.1222846219
BXD45 m 33.89 1.8359475571 37.5123464057 30.2676535943
BXD48 m 39.164 1.8359475571 42.7863464057 35.5416535943
BXD48a m 47.184 1.8359475571 50.8063464057 43.5616535943
BXD49 m 41.62 2.0526517704 45.6699064006 37.5700935994
BXD50 m 35.9625 2.0526517704 40.0124064006 31.9125935994
BXD51 m 37.7275 2.0526517704 41.7774064006 33.6775935994
BXD53 m 35.9 1.8359475571 39.5223464057 32.2776535943
BXD55 m 32.002 1.8359475571 35.6243464057 28.3796535943
BXD56 m 34.7133333333 2.3701981043 39.3897624344 30.0369042322
BXD6 m 36.338 1.8359475571 39.9603464057 32.7156535943
BXD60 m 45.336 1.8359475571 48.9583464057 41.7136535943
BXD62 m 33.855 2.0526517704 37.9049064006 29.8050935994
BXD63 m 36.6466666667 2.3701981043 41.3230957678 31.9702375656
BXD64 m 34.75 2.0526517704 38.7999064006 30.7000935994
BXD65 m 49.1875 2.0526517704 53.2374064006 45.1375935994
BXD65a m 47.126 1.8359475571 50.7483464057 43.5036535943
BXD65b m 51.4725 2.0526517704 55.5224064006 47.4225935994
BXD66 m 49.528 1.8359475571 53.1503464057 45.9056535943
BXD67 m 39.176 1.8359475571 42.7983464057 35.5536535943
BXD68 m 43.2333333333 2.3701981043 47.9097624344 38.5569042322
BXD69 m 40.242 1.8359475571 43.8643464057 36.6196535943
BXD70 m 31.96 2.0526517704 36.0099064006 27.9100935994
BXD71 m 39.1775 2.0526517704 43.2274064006 35.1275935994
BXD73 m 33.6275 2.0526517704 37.6774064006 29.5775935994
BXD73a m 43.812 1.8359475571 47.4343464057 40.1896535943
BXD73b m 40.238 1.8359475571 43.8603464057 36.6156535943
BXD75 m 35.41 1.8359475571 39.0323464057 31.7876535943
BXD77 m 33.49 1.8359475571 37.1123464057 29.8676535943
BXD79 m 39.53 1.8359475571 43.1523464057 35.9076535943
BXD8 m 30.4425 2.0526517704 34.4924064006 26.3925935994
BXD81 m 27.785 2.0526517704 31.8349064006 23.7350935994
BXD83 m 30.24 2.3701981043 34.9164291011 25.5635708989
BXD84 m 37.5566666667 2.3701981043 42.2330957678 32.8802375656
BXD85 m 47.856 1.8359475571 51.4783464057 44.2336535943
BXD87 m 28.412 1.8359475571 32.0343464057 24.7896535943
BXD89 m 35.9625 2.0526517704 40.0124064006 31.9125935994
BXD90 m 34.325 2.0526517704 38.3749064006 30.2750935994
BXD95 m 35.44 2.0526517704 39.4899064006 31.3900935994
BXD98 m 38.41 2.0526517704 42.4599064006 34.3600935994
BXD99 m 33.862 1.8359475571 37.4843464057 30.2396535943
DBA/2J m 34.9125 2.0526517704 38.9624064006 30.8625935994




  GWAS USING LINEAR MIXED MODELS