Project measure / variable:   Shorter5   vigorous_t90

ID, description, units MPD:110150   vigorous_t90   percentage of motile sperm that are 'vigorous'   [%]  at 90 min  
Data set, strains Shorter5   CC RIX   27 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter5 - percentage of motile sperm that are 'vigorous' at 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means46.68   %
Median of the strain means44.9   %
SD of the strain means± 9.5148
Coefficient of variation (CV)0.2038
Min–max range of strain means25.133   –   64.15   %
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 8295.4946 360.6737 4.6717 < 0.0001
Residuals 82 6330.6711 77.2033


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 36.8 8.061   2   5.7 0.219 31.1, 42.5 -1.04
RIX:CC(001 x 011) m 44.267 8.9047   3 5.1411 0.2012 37.0, 54.2 -0.25
RIX:CC(001 x 018) m 41.686 9.0221   7 3.41 0.2164 27.1, 52.3 -0.52
RIX:CC(002 x 010) m 43.5 6.1555   3 3.5539 0.1415 37.5, 49.8 -0.33
RIX:CC(002 x 011) m 57.63 4.0446   7 1.5287 0.0702 49.8, 62.9 1.15
RIX:CC(003 x 018) m 39.95 14.317   4 7.1587 0.3584 24.3, 57.8 -0.71
RIX:CC(008 x 013) m 58.95 12.973   8 4.5868 0.2201 36.2, 74.7 1.29
RIX:CC(008 x 021) m 51.09 5.7987   7 2.1917 0.1135 39.4, 58.6 0.46
RIX:CC(008 x 065) m 44.9 1.4177   3 0.81854 0.0316 43.8, 46.5 -0.19
RIX:CC(010 x 002) m 36.3 0.0   1   0.0 0.0 36.3, 36.3 -1.09
RIX:CC(010 x 011) m 54.54 11.313   7 4.2759 0.2074 41.4, 69.9 0.83
RIX:CC(011 x 003) m 50.8 5.6987   5 2.5485 0.1122 43.8, 58.2 0.43
RIX:CC(011 x 018) m 45.3 0.0   1   0.0 0.0 45.3, 45.3 -0.15
RIX:CC(013 x 053) m 53.1 0.0   1   0.0 0.0 53.1, 53.1 0.67
RIX:CC(018 x 002) m 35.6 8.1384   4 4.0692 0.2286 26.4, 45.3 -1.16
RIX:CC(018 x 003) m 57.37 10.916   3 6.3025 0.1903 44.8, 64.5 1.12
RIX:CC(018 x 010) m 44.65 6.558   6 2.6773 0.1469 35.7, 54.8 -0.21
RIX:CC(021 x 065) m 57.65 5.288   4 2.644 0.0917 52.2, 64.9 1.15
RIX:CC(034 x 008) m 64.15 1.6263   2   1.15 0.0254 63.0, 65.3 1.84
RIX:CC(034 x 021) m 36.05 2.949   4 1.4745 0.0818 32.5, 38.9 -1.12
RIX:CC(034 x 053) m 53.86 5.805   5 2.5961 0.1078 48.2, 61.6 0.75
RIX:CC(053 x 021) m 40.12 10.7   5 4.7853 0.2667 26.3, 50.4 -0.69
RIX:CC(053 x 034) m 25.133 12.176   3 7.03 0.4845 14.9, 38.6 -2.26
RIX:CC(065 x 008) m 46.05 11.53   4 5.7652 0.2504 31.1, 58.2 -0.07
RIX:CC(065 x 013) m 38.05 7.0344   4 3.5172 0.1849 31.5, 46.2 -0.91
RIX:CC(065 x 034) m 41.725 10.738   4 5.3691 0.2574 35.7, 57.8 -0.52
RIX:CC(065 x 053) m 61.15 0.91924   2   0.65 0.015 60.5, 61.8 1.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 36.8 6.2130228452 49.1596816418 24.4403183582
RIX:CC(001 x 011) m 44.2666666667 5.0729119103 54.3583044686 34.1750288648
RIX:CC(001 x 018) m 41.6857142857 3.3210004033 48.2922420162 35.0791865553
RIX:CC(002 x 010) m 43.5 5.0729119103 53.5916378019 33.4083621981
RIX:CC(002 x 011) m 57.6285714286 3.3210004033 64.235099159 51.0220436981
RIX:CC(003 x 018) m 39.95 4.3932705855 48.6896147022 31.2103852978
RIX:CC(008 x 013) m 58.95 3.1065114226 65.1298408209 52.7701591791
RIX:CC(008 x 021) m 51.0857142857 3.3210004033 57.6922420162 44.4791865553
RIX:CC(008 x 065) m 44.9 5.0729119103 54.9916378019 34.8083621981
RIX:CC(010 x 011) m 54.5428571429 3.3210004033 61.1493848733 47.9363294124
RIX:CC(011 x 003) m 50.8 3.9294606691 58.6169490285 42.9830509715
RIX:CC(018 x 002) m 35.6 4.3932705855 44.3396147022 26.8603852978
RIX:CC(018 x 003) m 57.3666666667 5.0729119103 67.4583044686 47.2750288648
RIX:CC(018 x 010) m 44.65 3.5870904121 51.785865523 37.514134477
RIX:CC(021 x 065) m 57.65 4.3932705855 66.3896147022 48.9103852978
RIX:CC(034 x 008) m 64.15 6.2130228452 76.5096816418 51.7903183582
RIX:CC(034 x 021) m 36.05 4.3932705855 44.7896147022 27.3103852978
RIX:CC(034 x 053) m 53.86 3.9294606691 61.6769490285 46.0430509715
RIX:CC(053 x 021) m 40.12 3.9294606691 47.9369490285 32.3030509715
RIX:CC(053 x 034) m 25.1333333333 5.0729119103 35.2249711352 15.0416955314
RIX:CC(065 x 008) m 46.05 4.3932705855 54.7896147022 37.3103852978
RIX:CC(065 x 013) m 38.05 4.3932705855 46.7896147022 29.3103852978
RIX:CC(065 x 034) m 41.725 4.3932705855 50.4646147022 32.9853852978
RIX:CC(065 x 053) m 61.15 6.2130228452 73.5096816418 48.7903183582




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA