Project measure / variable:   Wahlsten1   dist_EPM_min3

ID, description, units MPD:10842   dist_EPM_min3   distance traveled in 1 min   [cm]  during minute 3  
Data set, strains Wahlsten1   inbred   21 strains     sex: both     age: 9wks
Procedure elevated plus maze
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  STRAIN COMPARISON PLOT
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Wahlsten1 - distance traveled in 1 min during minute 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested21 strains21 strains
Mean of the strain means282   cm 273   cm
Median of the strain means237   cm 242   cm
SD of the strain means± 179 ± 187
Coefficient of variation (CV)0.637 0.684
Min–max range of strain means23.3   –   677   cm 52.5   –   754   cm
Mean sample size per strain8.9   mice 8.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6236.3174 6236.3174 0.1923 0.6613
strain 20 10040528.8324 502026.4416 15.4783 < 0.0001
sex:strain 20 1038397.3561 51919.8678 1.6008 0.0504
Residuals 328 10638450.5038 32434.3003


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 481.0 446.0   7 169.0 0.928 102.0, 1343.0 1.11
129S1/SvImJ m 143.0 114.0   10 36.0 0.795 24.0, 420.0 -0.7
A/J f 42.5 64.7   8 22.9 1.52 -1.33
A/J m 52.5 42.3   8 15.0 0.806 4.7, 113.0 -1.18
AKR/J f 224.0 124.0   8 43.7 0.551 89.1, 444.0 -0.32
AKR/J m 185.0 50.4   7 19.1 0.272 124.0, 285.0 -0.47
BALB/cByJ f 150.0 69.7   10 22.0 0.465 48.0, 237.0 -0.73
BALB/cByJ m 256.0 91.4   8 32.3 0.357 106.0, 394.0 -0.09
BTBR T+ Itpr3tf/J f 677.0 313.0   12 90.5 0.463 340.0, 1322.0 2.2
BTBR T+ Itpr3tf/J m 727.0 489.0   5 218.0 0.672 223.0, 1302.0 2.43
C3H/HeJ f 185.0 88.5   8 31.3 0.477 57.2, 320.0 -0.54
C3H/HeJ m 178.0 84.1   8 29.7 0.473 4.4, 272.0 -0.51
C57BL/6J f 555.0 298.0   8 105.0 0.537 254.0, 1084.0 1.52
C57BL/6J m 754.0 483.0   10 153.0 0.64 111.0, 1355.0 2.57
C57L/J f 238.0 65.7   10 20.8 0.276 121.0, 334.0 -0.24
C57L/J m 320.0 56.6   6 23.1 0.177 258.0, 417.0 0.25
C58/J f 570.0 271.0   8 95.8 0.475 316.0, 1153.0 1.61
C58/J m 395.0 223.0   10 70.5 0.564 79.3, 674.0 0.65
CAST/EiJ f 135.0 84.7   8 30.0 0.629 32.5, 226.0 -0.82
CAST/EiJ m 172.0 59.5   9 19.8 0.347 83.7, 304.0 -0.54
DBA/2J f 182.0 63.4   8 22.4 0.348 73.9, 250.0 -0.56
DBA/2J m 131.0 68.3   8 24.2 0.521 74.8, 266.0 -0.76
FVB/NJ f 247.0 75.6   10 23.9 0.306 132.0, 376.0 -0.19
FVB/NJ m 311.0 56.2   11 16.9 0.18 183.0, 412.0 0.2
MOLF/EiJ f 216.0 95.0   8 33.6 0.44 74.3, 387.0 -0.37
MOLF/EiJ m 195.0 132.0   7 49.8 0.676 42.6, 467.0 -0.42
NOD/ShiLtJ f 237.0 110.0   12 31.8 0.465 -0.25
NOD/ShiLtJ m 314.0 93.0   12 26.8 0.296 168.0, 428.0 0.22
NZB/BlNJ f 503.0 421.0   6 172.0 0.836 76.0, 1115.0 1.23
NZB/BlNJ m 467.0 222.0   12 64.1 0.476 127.0, 961.0 1.04
PERA/EiJ f 184.0 95.9   10 30.3 0.521 81.6, 429.0 -0.55
PERA/EiJ m 124.0 63.9   11 19.3 0.517 55.5, 273.0 -0.8
PL/J f 315.0 121.0   12 35.1 0.386 116.0, 523.0 0.18
PL/J m 313.0 75.2   8 26.6 0.24 215.0, 452.0 0.21
SJL/J f 104.0 38.2   8 13.5 0.367 51.0, 164.0 -0.99
SJL/J m 141.0 72.7   10 23.0 0.516 30.7, 254.0 -0.71
SM/J f 314.0 179.0   14 47.9 0.572 50.1, 617.0 0.18
SM/J m 247.0 167.0   8 59.1 0.678 21.3, 478.0 -0.14
SPRET/EiJ f 23.3 6.25   6 2.55 0.269 15.1, 30.2 -1.44
SPRET/EiJ m 70.0 15.9   2   11.2 0.227 58.7, 81.2 -1.09
SWR/J f 336.0 94.4   9 31.5 0.281 220.0, 537.0 0.3
SWR/J m 242.0 91.1   10 28.8 0.376 83.1, 380.0 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 480.5714 68.0696 614.4795 346.6633
129S1/SvImJ m 143.2 56.9511 255.2355 31.1645
A/J f 42.55 63.6733 167.8095 0.0
A/J m 52.5125 63.6733 177.772 0.0
AKR/J f 224.2625 63.6733 349.522 99.003
AKR/J m 185.2857 68.0696 319.1938 51.3776
BALB/cByJ f 149.64 56.9511 261.6755 37.6045
BALB/cByJ m 256.0 63.6733 381.2595 130.7405
BTBR T+ Itpr3tf/J f 676.9167 51.989 779.1907 574.6427
BTBR T+ Itpr3tf/J m 726.6 80.541 885.0422 568.1578
C3H/HeJ f 185.35 63.6733 310.6095 60.0905
C3H/HeJ m 177.925 63.6733 303.1845 52.6655
C57BL/6J f 554.625 63.6733 679.8845 429.3655
C57BL/6J m 754.2 56.9511 866.2355 642.1645
C57L/J f 238.3 56.9511 350.3355 126.2645
C57L/J m 319.5 73.5236 464.1373 174.8627
C58/J f 570.5 63.6733 695.7595 445.2405
C58/J m 395.33 56.9511 507.3655 283.2945
CAST/EiJ f 134.7 63.6733 259.9595 9.4405
CAST/EiJ m 171.7444 60.0318 289.8403 53.6486
DBA/2J f 182.2375 63.6733 307.497 56.978
DBA/2J m 131.1125 63.6733 256.372 5.853
FVB/NJ f 247.1 56.9511 359.1355 135.0645
FVB/NJ m 311.3636 54.3008 418.1853 204.5419
MOLF/EiJ f 215.9125 63.6733 341.172 90.653
MOLF/EiJ m 194.8 68.0696 328.7081 60.8919
NOD/ShiLtJ f 236.75 51.989 339.024 134.476
NOD/ShiLtJ m 314.0833 51.989 416.3573 211.8093
NZB/BlNJ f 503.0 73.5236 647.6373 358.3627
NZB/BlNJ m 466.9167 51.989 569.1907 364.6427
PERA/EiJ f 184.17 56.9511 296.2055 72.1345
PERA/EiJ m 123.5636 54.3008 230.3853 16.7419
PL/J f 314.6667 51.989 416.9407 212.3927
PL/J m 313.125 63.6733 438.3845 187.8655
SJL/J f 104.025 63.6733 229.2845 0.0
SJL/J m 141.02 56.9511 253.0555 28.9845
SM/J f 313.7929 48.1325 408.4802 219.1055
SM/J m 246.5625 63.6733 371.822 121.303
SPRET/EiJ f 23.2667 73.5236 167.9039 0.0
SPRET/EiJ m 69.95 127.3466 320.4691 0.0
SWR/J f 335.6667 60.0318 453.7625 217.5708
SWR/J m 242.21 56.9511 354.2455 130.1745


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 311.8857 44.376 399.1831 224.5883
A/J both 47.5312 45.0238 136.1031 0.0
AKR/J both 204.7741 46.6041 296.4547 113.0935
BALB/cByJ both 202.82 42.7133 286.8467 118.7933
BTBR T+ Itpr3tf/J both 701.7583 47.9315 796.0503 607.4664
C3H/HeJ both 181.6375 45.0238 270.2094 93.0656
C57BL/6J both 654.4125 42.7133 738.4392 570.3858
C57L/J both 278.9 46.5004 370.3766 187.4234
C58/J both 482.915 42.7133 566.9417 398.8883
CAST/EiJ both 153.2222 43.7553 239.2986 67.1458
DBA/2J both 156.675 45.0238 245.2469 68.1031
FVB/NJ both 279.2318 39.3446 356.6315 201.8321
MOLF/EiJ both 205.3563 46.6041 297.0368 113.6757
NOD/ShiLtJ both 275.4167 36.7618 347.7353 203.098
NZB/BlNJ both 484.9583 45.0238 573.5302 396.3865
PERA/EiJ both 153.8668 39.3446 231.2665 76.4671
PL/J both 313.8958 41.1009 394.7505 233.0411
SJL/J both 122.5225 42.7133 206.5492 38.4958
SM/J both 280.1777 39.9093 358.6883 201.6671
SPRET/EiJ both 46.6083 73.5236 191.2456 0.0
SWR/J both 288.9383 41.374 370.3303 207.5464




  GWAS USING LINEAR MIXED MODELS