Project measure / variable:   Tordoff3   NaLa_pref75

ID, description, units MPD:10318   NaLa_pref75   preference for NaLa (sodium lactate) solutions   [%]  concentration 75 mM  
Data set, strains Tordoff3   inbred w/CC7   40 strains     sex: both     age: 12-14wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff3 - preference for NaLa (sodium lactate) solutions concentration 75 mM



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means61.6   % 60.9   %
Median of the strain means61.2   % 63.5   %
SD of the strain means± 12.5 ± 12.8
Coefficient of variation (CV)0.202 0.211
Min–max range of strain means35.4   –   94.9   % 37.8   –   83.1   %
Mean sample size per strain9.8   mice 9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 84.3907 84.3907 0.2265 0.6343
strain 39 108969.1565 2794.0809 7.4984 < 0.0001
sex:strain 39 16252.7903 416.7382 1.1184 0.2885
Residuals 709 264189.9602 372.6234


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 75.5 22.4   10 7.09 0.297 30.3, 97.2 1.11
129S1/SvImJ m 67.8 17.2   9 5.74 0.254 45.6, 95.9 0.54
A/J f 62.2 24.4   10 7.72 0.392 10.4, 88.3 0.05
A/J m 71.2 13.4   10 4.25 0.189 50.0, 90.9 0.81
AKR/J f 56.2 18.5   9 6.17 0.33 24.7, 72.3 -0.44
AKR/J m 39.1 19.6   10 6.21 0.502 7.1, 67.6 -1.7
BALB/cByJ f 69.8 20.3   9 6.76 0.291 23.4, 92.1 0.66
BALB/cByJ m 70.8 11.4   10 3.6 0.161 42.9, 85.3 0.78
BTBR T+ Itpr3tf/J f 74.0 13.1   10 4.14 0.177 56.2, 93.7 0.99
BTBR T+ Itpr3tf/J m 77.3 16.7   10 5.29 0.216 42.5, 95.7 1.28
BUB/BnJ f 74.0 19.0   10 6.01 0.257 26.2, 94.0 0.99
BUB/BnJ m 70.9 14.7   9 4.88 0.207 48.8, 87.1 0.78
C3H/HeJ f 55.2 24.1   10 7.62 0.436 10.2, 83.8 -0.52
C3H/HeJ m 58.0 31.3   10 9.9 0.54 8.3, 89.6 -0.22
C57BL/10J f 71.3 12.8   10 4.05 0.179 42.6, 84.5 0.78
C57BL/10J m 70.0 8.39   10 2.65 0.12 60.0, 84.3 0.71
C57BL/6J f 59.4 14.1   9 4.7 0.237 42.0, 77.7 -0.18
C57BL/6J m 58.3 13.0   9 4.34 0.223 33.9, 75.3 -0.2
C57BLKS/J f 65.6 11.4   10 3.6 0.174 48.8, 80.3 0.32
C57BLKS/J m 73.8 7.34   8 2.6 0.0995 62.5, 82.1 1.01
C57BR/cdJ f 47.5 21.4   15 5.52 0.45 2.4, 79.1 -1.13
C57BR/cdJ m 38.7 15.4   13 4.27 0.398 14.3, 61.7 -1.73
C57L/J f 51.5 10.4   10 3.29 0.202 32.3, 72.7 -0.81
C57L/J m 52.4 13.5   10 4.28 0.259 34.8, 79.8 -0.66
C58/J f 49.8 28.4   9 9.48 0.571 12.9, 85.1 -0.95
C58/J m 61.9 28.3   9 9.43 0.457 8.1, 93.5 0.08
CAST/EiJ f 70.7 12.7   10 4.03 0.18 50.0, 85.7 0.73
CAST/EiJ m 71.1 10.9   10 3.44 0.153 53.2, 90.2 0.8
CBA/J f 49.2 24.9   10 7.89 0.507 15.1, 83.6 -1.0
CBA/J m 55.2 20.7   10 6.54 0.375 19.8, 82.0 -0.44
CE/J f 45.2 34.1   9 11.4 0.753 2.7, 90.5 -1.32
CE/J m 73.9 13.5   8 4.76 0.182 50.0, 87.2 1.02
CZECHII/EiJ f 58.8 34.0   9 11.3 0.578 5.5, 93.3 -0.23
CZECHII/EiJ m 42.4 32.9   10 10.4 0.775 7.7, 87.7 -1.44
DBA/2J f 52.6 23.9   10 7.54 0.454 9.1, 90.7 -0.73
DBA/2J m 53.9 19.2   10 6.06 0.356 24.4, 83.0 -0.54
FVB/NJ f 78.1 10.5   10 3.32 0.134 59.7, 90.3 1.32
FVB/NJ m 75.8 11.3   10 3.57 0.149 46.2, 85.5 1.17
I/LnJ f 62.4 7.17   10 2.27 0.115 55.1, 78.1 0.06
I/LnJ m 63.8 14.0   10 4.43 0.22 30.4, 87.2 0.23
JF1/MsJ f 61.3 32.1   10 10.1 0.523 -0.03
JF1/MsJ m 64.4 17.4   10 5.49 0.269 31.4, 86.0 0.28
KK/HlJ f 65.3 33.4   10 10.6 0.511 4.6, 94.8 0.29
KK/HlJ m 64.8 19.2   10 6.08 0.296 43.5, 98.1 0.31
LP/J f 71.5 14.5   10 4.58 0.203 47.6, 87.7 0.79
LP/J m 63.2 19.4   10 6.14 0.307 23.1, 84.8 0.18
MA/MyJ f 94.9 4.27   8 1.51 0.0449 88.5, 99.2 2.67
MA/MyJ m 83.1 12.7   15 3.27 0.153 53.4, 96.1 1.74
MOLF/EiJ f 42.9 14.5   9 4.84 0.338 14.5, 61.1 -1.5
MOLF/EiJ m 37.8 11.5   10 3.63 0.304 15.2, 50.7 -1.8
MSM/MsJ f 70.0 12.9   10 4.08 0.184 50.8, 85.5 0.67
MSM/MsJ m 57.2 15.2   10 4.8 0.265 22.4, 75.7 -0.29
NOD/ShiLtJ f 66.0 27.1   10 8.58 0.411 18.2, 93.6 0.35
NOD/ShiLtJ m 43.7 26.8   10 8.49 0.614 9.9, 92.5 -1.34
NON/ShiLtJ f 51.9 12.4   10 3.94 0.24 31.8, 70.7 -0.78
NON/ShiLtJ m 50.0 15.3   10 4.82 0.305 30.5, 73.1 -0.85
NZB/BlNJ f 60.4 6.2   10 1.96 0.103 51.9, 73.9 -0.1
NZB/BlNJ m 59.0 11.1   10 3.49 0.187 35.2, 70.8 -0.15
NZW/LacJ f 79.2 7.24   10 2.29 0.0913 71.0, 89.6 1.41
NZW/LacJ m 76.6 8.14   10 2.57 0.106 62.3, 88.1 1.23
PERA/EiJ f 37.9 27.3   10 8.62 0.72 4.3, 83.0 -1.91
PERA/EiJ m 39.7 23.1   10 7.32 0.582 9.1, 74.2 -1.65
PL/J f 48.2 26.1   10 8.25 0.541 12.1, 88.8 -1.08
PL/J m 47.2 28.2   10 8.92 0.597 15.5, 83.3 -1.07
PWK/PhJ f 61.2 20.6   10 6.51 0.336 20.0, 91.1 -0.03
PWK/PhJ m 71.2 15.8   10 5.0 0.222 48.8, 90.6 0.81
RIIIS/J f 74.6 21.9   10 6.93 0.293 49.2, 125.0 1.04
RIIIS/J m 65.5 10.9   10 3.45 0.167 48.0, 81.0 0.36
SEA/GnJ f 55.7 13.0   10 4.13 0.234 24.6, 67.5 -0.48
SEA/GnJ m 62.5 13.1   10 4.13 0.209 50.0, 90.0 0.13
SJL/J f 74.9 18.9   10 5.97 0.252 30.1, 101.0 1.07
SJL/J m 75.7 11.3   10 3.58 0.149 58.7, 91.4 1.16
SM/J f 54.8 15.8   10 5.0 0.289 14.9, 69.0 -0.55
SM/J m 44.5 31.3   10 9.91 0.704 5.2, 95.7 -1.28
SPRET/EiJ f 69.8 14.4   9 4.81 0.207 49.5, 89.1 0.66
SPRET/EiJ m 64.3 7.14   5 3.2 0.111 56.0, 72.6 0.27
SWR/J f 60.4 24.3   10 7.7 0.403 6.9, 90.5 -0.1
SWR/J m 75.3 18.4   9 6.13 0.244 34.8, 93.4 1.13
WSB/EiJ f 35.4 14.0   10 4.44 0.397 10.3, 58.0 -2.11
WSB/EiJ m 42.5 25.7   10 8.14 0.605 7.7, 78.7 -1.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 75.47 6.1043 87.4546 63.4854
129S1/SvImJ m 67.7889 6.4345 80.4218 55.156
A/J f 62.21 6.1043 74.1946 50.2254
A/J m 71.23 6.1043 83.2146 59.2454
AKR/J f 56.1556 6.4345 68.7885 43.5226
AKR/J m 39.12 6.1043 51.1046 27.1354
BALB/cByJ f 69.7556 6.4345 82.3885 57.1226
BALB/cByJ m 70.81 6.1043 82.7946 58.8254
BTBR T+ Itpr3tf/J f 73.95 6.1043 85.9346 61.9654
BTBR T+ Itpr3tf/J m 77.31 6.1043 89.2946 65.3254
BUB/BnJ f 73.97 6.1043 85.9546 61.9854
BUB/BnJ m 70.8778 6.4345 83.5107 58.2449
C3H/HeJ f 55.19 6.1043 67.1746 43.2054
C3H/HeJ m 57.97 6.1043 69.9546 45.9854
C57BL/10J f 71.3 6.1043 83.2846 59.3154
C57BL/10J m 70.02 6.1043 82.0046 58.0354
C57BL/6J f 59.4 6.4345 72.0329 46.7671
C57BL/6J m 58.2889 6.4345 70.9218 45.656
C57BLKS/J f 65.56 6.1043 77.5446 53.5754
C57BLKS/J m 73.7625 6.8248 87.1617 60.3633
C57BR/cdJ f 47.5267 4.9841 57.3121 37.7412
C57BR/cdJ m 38.7 5.3538 49.2112 28.1888
C57L/J f 51.48 6.1043 63.4646 39.4954
C57L/J m 52.35 6.1043 64.3346 40.3654
C58/J f 49.8444 6.4345 62.4774 37.2115
C58/J m 61.9222 6.4345 74.5551 49.2893
CAST/EiJ f 70.72 6.1043 82.7046 58.7354
CAST/EiJ m 71.11 6.1043 83.0946 59.1254
CBA/J f 49.18 6.1043 61.1646 37.1954
CBA/J m 55.19 6.1043 67.1746 43.2054
CE/J f 45.2444 6.4345 57.8774 32.6115
CE/J m 73.875 6.8248 87.2742 60.4758
CZECHII/EiJ f 58.8222 6.4345 71.4551 46.1893
CZECHII/EiJ m 42.43 6.1043 54.4146 30.4454
DBA/2J f 52.59 6.1043 64.5746 40.6054
DBA/2J m 53.85 6.1043 65.8346 41.8654
FVB/NJ f 78.14 6.1043 90.1246 66.1554
FVB/NJ m 75.83 6.1043 87.8146 63.8454
I/LnJ f 62.37 6.1043 74.3546 50.3854
I/LnJ m 63.84 6.1043 75.8246 51.8554
JF1/MsJ f 61.33 6.1043 73.3146 49.3454
JF1/MsJ m 64.42 6.1043 76.4046 52.4354
KK/HlJ f 65.32 6.1043 77.3046 53.3354
KK/HlJ m 64.85 6.1043 76.8346 52.8654
LP/J f 71.51 6.1043 83.4946 59.5254
LP/J m 63.19 6.1043 75.1746 51.2054
MA/MyJ f 94.9 6.8248 108.2992 81.5008
MA/MyJ m 83.1467 4.9841 92.9321 73.3612
MOLF/EiJ f 42.9 6.4345 55.5329 30.2671
MOLF/EiJ m 37.76 6.1043 49.7446 25.7754
MSM/MsJ f 69.97 6.1043 81.9546 57.9854
MSM/MsJ m 57.21 6.1043 69.1946 45.2254
NOD/ShiLtJ f 66.05 6.1043 78.0346 54.0654
NOD/ShiLtJ m 43.73 6.1043 55.7146 31.7454
NON/ShiLtJ f 51.94 6.1043 63.9246 39.9554
NON/ShiLtJ m 50.05 6.1043 62.0346 38.0654
NZB/BlNJ f 60.42 6.1043 72.4046 48.4354
NZB/BlNJ m 58.98 6.1043 70.9646 46.9954
NZW/LacJ f 79.23 6.1043 91.2146 67.2454
NZW/LacJ m 76.59 6.1043 88.5746 64.6054
PERA/EiJ f 37.86 6.1043 49.8446 25.8754
PERA/EiJ m 39.72 6.1043 51.7046 27.7354
PL/J f 48.19 6.1043 60.1746 36.2054
PL/J m 47.22 6.1043 59.2046 35.2354
PWK/PhJ f 61.19 6.1043 73.1746 49.2054
PWK/PhJ m 71.25 6.1043 83.2346 59.2654
RIIIS/J f 74.63 6.1043 86.6146 62.6454
RIIIS/J m 65.5 6.1043 77.4846 53.5154
SEA/GnJ f 55.7 6.1043 67.6846 43.7154
SEA/GnJ m 62.54 6.1043 74.5246 50.5554
SJL/J f 74.9 6.1043 86.8846 62.9154
SJL/J m 75.68 6.1043 87.6646 63.6954
SM/J f 54.8 6.1043 66.7846 42.8154
SM/J m 44.53 6.1043 56.5146 32.5454
SPRET/EiJ f 69.7556 6.4345 82.3885 57.1226
SPRET/EiJ m 64.26 8.6328 81.2088 47.3112
SWR/J f 60.38 6.1043 72.3646 48.3954
SWR/J m 75.3444 6.4345 87.9774 62.7115
WSB/EiJ f 35.36 6.1043 47.3446 23.3754
WSB/EiJ m 42.55 6.1043 54.5346 30.5654


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 71.6294 4.4347 80.3361 62.9228
A/J both 66.72 4.3164 75.1944 58.2456
AKR/J both 47.6378 4.4347 56.3444 38.9311
BALB/cByJ both 70.2828 4.4347 78.9894 61.5761
BTBR T+ Itpr3tf/J both 75.63 4.3164 84.1044 67.1556
BUB/BnJ both 72.4239 4.4347 81.1305 63.7172
C3H/HeJ both 56.58 4.3164 65.0544 48.1056
C57BL/10J both 70.66 4.3164 79.1344 62.1856
C57BL/6J both 58.8444 4.5499 67.7773 49.9116
C57BLKS/J both 69.6612 4.5782 78.6497 60.6728
C57BR/cdJ both 43.1133 3.6574 50.2939 35.9328
C57L/J both 51.915 4.3164 60.3894 43.4406
C58/J both 55.8833 4.5499 64.8162 46.9505
CAST/EiJ both 70.915 4.3164 79.3894 62.4406
CBA/J both 52.185 4.3164 60.6594 43.7106
CE/J both 59.5597 4.6899 68.7675 50.352
CZECHII/EiJ both 50.6261 4.4347 59.3328 41.9195
DBA/2J both 53.22 4.3164 61.6944 44.7456
FVB/NJ both 76.985 4.3164 85.4594 68.5106
I/LnJ both 63.105 4.3164 71.5794 54.6306
JF1/MsJ both 62.875 4.3164 71.3494 54.4006
KK/HlJ both 65.085 4.3164 73.5594 56.6106
LP/J both 67.35 4.3164 75.8244 58.8756
MA/MyJ both 89.0233 4.2255 97.3193 80.7273
MOLF/EiJ both 40.33 4.4347 49.0366 31.6234
MSM/MsJ both 63.59 4.3164 72.0644 55.1156
NOD/ShiLtJ both 54.89 4.3164 63.3644 46.4156
NON/ShiLtJ both 50.995 4.3164 59.4694 42.5206
NZB/BlNJ both 59.7 4.3164 68.1744 51.2256
NZW/LacJ both 77.91 4.3164 86.3844 69.4356
PERA/EiJ both 38.79 4.3164 47.2644 30.3156
PL/J both 47.705 4.3164 56.1794 39.2306
PWK/PhJ both 66.22 4.3164 74.6944 57.7456
RIIIS/J both 70.065 4.3164 78.5394 61.5906
SEA/GnJ both 59.12 4.3164 67.5944 50.6456
SJL/J both 75.29 4.3164 83.7644 66.8156
SM/J both 49.665 4.3164 58.1394 41.1906
SPRET/EiJ both 67.0078 5.3835 77.5772 56.4383
SWR/J both 67.8622 4.4347 76.5689 59.1556
WSB/EiJ both 38.955 4.3164 47.4294 30.4806




  GWAS USING LINEAR MIXED MODELS