CGD-MDA5: SNP data from Mouse Diversity Genotyping Array, 470,000+ locations for 60 B6.A and B6.PWD chromosome substitution strains of mice (2014)

Yang H, Wang JR, Didion JP, Buus RJ, Bell TA, Welsh CE, Bonhomme F, Yu AH, Nachman MW, Pialek J, Tucker P, Boursot P, McMillan L, Churchill GA, de Villena FP. Subspecific origin and haplotype diversity in the laboratory mouse. Nat Genet. 2011 May 29;43(7):648-55. doi: 10.1038/ng.847.   PubMed 21623374     FullText

CGD-MDA5 downloads
Do the following: Click Retrieve SNP Data above, submit a query, then save your results as CSV.
Institutional authorship Center for Genome Dynamics (CGD)     Lab web site
Investigators Gary A Churchill       The Jackson Laboratory,  Bar Harbor, ME
Participants Churchill GA, Yang H, Ding Y, Hutchins LN, Szatkiewicz J, Wang JR, Didion JP, Buus RJ, Welsh CE, Yu AH, Nachman MW, Pialek J, Tucker P, Boursot P, McMillan L, Bell TA, Paigen B, Graber JH, Bonhomme F, de Villena FP
ContactGary A Churchill     Lab web site
Part of a series: • MDA SNPs, inbred strains   see CGD-MDA1
• BXD strains   see CGD-MDA2
• ILSXISS strains   see CGD-MDA3
• AXB, BXA, BXH, CXB, AKXL strains   see CGD-MDA4
• B6.A and B6.PWD chr substition strains   (this project) CGD-MDA5
Project type SNP/variation strain survey data set
MPD identifiersCGD-MDA5     MPD:324
Data changelog No updates/corrections.       Initial release date: 04/2014.
Formatted citation
Click above to copy-paste the entire citation for this MPD web page.
• SNP profiling, 470,000+ genomic locations, 1-19,X,Y,MT.
53 strains tested
• Panel: B6.A, B6.PWD consomic panels