Project measure / variable:   Schwartz2   pctNEUT_ova24

ID, description, units MPD:9847   pctNEUT_ova24   alveolar neutrophils (percentage of total lavage cells), 24h post-challenge   [%]  OVA-sensitized  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar neutrophils (percentage of total lavage cells), 24h post-challenge OVA-sensitized



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means12.2   %
Median of the strain means9.55   %
SD of the strain means± 12.3
Coefficient of variation (CV)1.01
Min–max range of strain means2.20   –   40.4   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 5323.5938 760.5134 19.6563 < 0.0001
Residuals 32 1238.1 38.6906


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 7.9 3.52   5 1.58 0.446 4.5, 13.0 -0.35
A/J m 5.8 1.64   5 0.735 0.283 4.0, 8.0 -0.52
BALB/cJ m 15.2 4.21   5 1.88 0.277 8.0, 19.0 0.25
BTBR T+ Itpr3tf/J m 40.4 12.7   5 5.7 0.315 22.0, 56.0 2.29
C3H/HeJ m 2.2 1.48   5 0.663 0.674 -0.81
C57BL/6J m 12.4 8.71   5 3.89 0.702 5.0, 25.0 0.02
DBA/2J m 11.2 5.12   5 2.29 0.457 4.0, 17.0 -0.08
FVB/NJ m 2.2 3.19   5 1.43 1.45 -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 7.9 2.7817 13.5662 2.2338
A/J m 5.8 2.7817 11.4662 0.1338
BALB/cJ m 15.2 2.7817 20.8662 9.5338
BTBR T+ Itpr3tf/J m 40.4 2.7817 46.0662 34.7338
C3H/HeJ m 2.2 2.7817 7.8662 0.0
C57BL/6J m 12.4 2.7817 18.0662 6.7338
DBA/2J m 11.2 2.7817 16.8662 5.5338
FVB/NJ m 2.2 2.7817 7.8662 0.0




  GWAS USING LINEAR MIXED MODELS