Project measure / variable:   Schwartz2   pctLYM_ova24

ID, description, units MPD:9827   pctLYM_ova24   alveolar lymphocytes (percentage of total lavage cells), 24h post-challenge   [%]  OVA-sensitized  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar lymphocytes (percentage of total lavage cells), 24h post-challenge OVA-sensitized



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means1.15   %
Median of the strain means0.600   %
SD of the strain means± 1.34
Coefficient of variation (CV)1.16
Min–max range of strain means0   –   3.80   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 62.7 8.9571 6.7601 0.0001
Residuals 32 42.4 1.325


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   5 0.0 0.0 -0.86
A/J m 0.8 0.837   5 0.374 1.05 -0.26
BALB/cJ m 3.8 1.92   5 0.86 0.506 1.0, 6.0 1.98
BTBR T+ Itpr3tf/J m 0.0 0.0   5 0.0 0.0 -0.86
C3H/HeJ m 0.4 0.548   5 0.245 1.37 -0.56
C57BL/6J m 2.4 1.14   5 0.51 0.475 1.0, 4.0 0.93
DBA/2J m 1.4 2.07   5 0.927 1.48 0.19
FVB/NJ m 0.4 0.548   5 0.245 1.37 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 0.5148 1.0486 -1.0486
A/J m 0.8 0.5148 1.8486 -0.2486
BALB/cJ m 3.8 0.5148 4.8486 2.7514
BTBR T+ Itpr3tf/J m 0.0 0.5148 1.0486 -1.0486
C3H/HeJ m 0.4 0.5148 1.4486 -0.6486
C57BL/6J m 2.4 0.5148 3.4486 1.3514
DBA/2J m 1.4 0.5148 2.4486 0.3514
FVB/NJ m 0.4 0.5148 1.4486 -0.6486




  GWAS USING LINEAR MIXED MODELS