Project measure / variable:   Schwartz2   pctLYM_ctrl0

ID, description, units MPD:9821   pctLYM_ctrl0   alveolar lymphocytes (percentage of total lavage cells), pre-challenge   [%]  control  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar lymphocytes (percentage of total lavage cells), pre-challenge control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means0.667   %
Median of the strain means0.500   %
SD of the strain means± 0.617
Coefficient of variation (CV)0.926
Min–max range of strain means0   –   2.00   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 8.0 1.1429 1.3714 0.2826
Residuals 16 13.3333 0.8333


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.0 0.0   3 0.0 0.0 -1.08
A/J m 0.333 0.577   3 0.333 1.73 -0.54
BALB/cJ m 0.333 0.577   3 0.333 1.73 -0.54
BTBR T+ Itpr3tf/J m 1.0 1.73   3 1.0 1.73 0.54
C3H/HeJ m 0.333 0.577   3 0.333 1.73 -0.54
C57BL/6J m 0.667 0.577   3 0.333 0.866 0.0
DBA/2J m 0.667 1.15   3 0.667 1.73 0.0
FVB/NJ m 2.0 1.0   3 0.577 0.5 1.0, 3.0 2.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0 0.527 1.1173 -1.1173
A/J m 0.3333 0.527 1.4506 -0.784
BALB/cJ m 0.3333 0.527 1.4506 -0.784
BTBR T+ Itpr3tf/J m 1.0 0.527 2.1173 -0.1173
C3H/HeJ m 0.3333 0.527 1.4506 -0.784
C57BL/6J m 0.6667 0.527 1.784 -0.4506
DBA/2J m 0.6667 0.527 1.784 -0.4506
FVB/NJ m 2.0 0.527 3.1173 0.8827




  GWAS USING LINEAR MIXED MODELS