Project measure / variable:   Brown1   bw_OFT

ID, description, units MPD:9470   bw_OFT   body weight before test (local parameter)   [g]  
Data set, strains Brown1   inbred   14 strains     sex: both     age: 10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Brown1 - body weight before test (local parameter)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means18.9   g 23.1   g
Median of the strain means20.0   g 25.1   g
SD of the strain means± 4.12 ± 5.61
Coefficient of variation (CV)0.219 0.243
Min–max range of strain means12.5   –   24.6   g 13.5   –   30.9   g
Mean sample size per strain12.7   mice 13.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1793.6379 1793.6379 433.8563 < 0.0001
strain 13 6980.0669 536.9282 129.8755 < 0.0001
sex:strain 13 311.8355 23.9873 5.8022 < 0.0001
Residuals 340 1405.6195 4.1342


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.1 1.13   12 0.327 0.0512 20.5, 24.5 0.78
129S1/SvImJ m 27.0 3.73   12 1.08 0.138 20.1, 32.4 0.7
A/J f 20.6 1.75   12 0.504 0.0849 17.2, 23.2 0.42
A/J m 22.9 1.61   20 0.36 0.0704 19.8, 26.8 -0.03
AKR/J f 24.6 1.23   12 0.355 0.05 22.5, 26.3 1.39
AKR/J m 30.9 2.87   19 0.658 0.0927 27.8, 36.7 1.4
BALB/cByJ f 23.2 1.93   22 0.412 0.0833 19.7, 29.5 1.05
BALB/cByJ m 27.1 2.11   12 0.608 0.0776 22.8, 30.8 0.72
BALB/cJ f 21.9 3.14   14 0.839 0.143 18.9, 28.6 0.74
BALB/cJ m 26.4 1.16   12 0.334 0.0438 24.6, 27.8 0.6
C3H/HeJ f 19.6 2.16   19 0.496 0.11 16.4, 23.6 0.18
C3H/HeJ m 25.0 3.4   18 0.8 0.136 19.4, 31.8 0.35
C57BL/6J f 19.1 1.72   12 0.498 0.0901 16.6, 21.4 0.06
C57BL/6J m 26.2 1.73   13 0.481 0.0661 23.8, 29.4 0.56
CAST/EiJ f 12.5 0.748   10 0.237 0.06 11.5, 13.8 -1.54
CAST/EiJ m 14.7 1.57   11 0.473 0.106 11.5, 16.9 -1.49
DBA/2J f 20.4 1.67   14 0.446 0.0816 16.6, 23.3 0.37
DBA/2J m 24.0 1.88   13 0.522 0.0783 21.4, 27.4 0.17
FVB/NJ f 21.1 1.9   12 0.548 0.0901 18.4, 24.4 0.54
FVB/NJ m 27.3 1.33   12 0.385 0.0489 25.5, 28.9 0.76
MOLF/EiJ f 12.9 0.772   12 0.223 0.0598 11.1, 14.0 -1.45
MOLF/EiJ m 13.7 1.2   11 0.361 0.0877 12.2, 15.6 -1.67
SJL/J f 19.5 0.81   13 0.225 0.0415 17.8, 20.7 0.15
SJL/J m 25.2 1.06   12 0.307 0.0422 22.8, 27.0 0.38
SM/J f 13.7 2.58   10 0.816 0.188 9.76, 17.5 -1.25
SM/J m 18.8 2.91   12 0.84 0.155 14.3, 23.4 -0.76
SPRET/EiJ f 12.9 0.792   10 0.25 0.0616 12.0, 14.4 -1.45
SPRET/EiJ m 13.5 0.932   7 0.352 0.0689 11.8, 14.4 -1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.1333 0.587 23.2879 20.9788
129S1/SvImJ m 27.0167 0.587 28.1712 25.8621
A/J f 20.5833 0.587 21.7379 19.4288
A/J m 22.86 0.4547 23.7543 21.9657
AKR/J f 24.6 0.587 25.7545 23.4455
AKR/J m 30.9158 0.4665 31.8333 29.9983
BALB/cByJ f 23.1864 0.4335 24.039 22.3337
BALB/cByJ m 27.1417 0.587 28.2962 25.9871
BALB/cJ f 21.8857 0.5434 22.9546 20.8168
BALB/cJ m 26.4167 0.587 27.5712 25.2621
C3H/HeJ f 19.6421 0.4665 20.5596 18.7246
C3H/HeJ m 25.0278 0.4792 25.9704 24.0851
C57BL/6J f 19.1333 0.587 20.2879 17.9788
C57BL/6J m 26.2462 0.5639 27.3554 25.1369
CAST/EiJ f 12.47 0.643 13.7347 11.2053
CAST/EiJ m 14.7455 0.6131 15.9513 13.5396
DBA/2J f 20.4214 0.5434 21.4903 19.3526
DBA/2J m 24.0462 0.5639 25.1554 22.9369
FVB/NJ f 21.0917 0.587 22.2462 19.9371
FVB/NJ m 27.2833 0.587 28.4379 26.1288
MOLF/EiJ f 12.9167 0.587 14.0712 11.7621
MOLF/EiJ m 13.6545 0.6131 14.8604 12.4487
SJL/J f 19.5154 0.5639 20.6246 18.4062
SJL/J m 25.1667 0.587 26.3212 24.0121
SM/J f 13.696 0.643 14.9607 12.4313
SM/J m 18.7667 0.587 19.9212 17.6121
SPRET/EiJ f 12.86 0.643 14.1247 11.5953
SPRET/EiJ m 13.5286 0.7685 15.0402 12.017


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.575 0.415 25.3914 23.7586
A/J both 21.7217 0.3712 22.4518 20.9915
AKR/J both 27.7579 0.3749 28.4952 27.0205
BALB/cByJ both 25.164 0.3648 25.8816 24.4464
BALB/cJ both 24.1512 0.3999 24.9379 23.3645
C3H/HeJ both 22.3349 0.3344 22.9927 21.6772
C57BL/6J both 22.6897 0.407 23.4903 21.8892
CAST/EiJ both 13.6077 0.4442 14.4815 12.734
DBA/2J both 22.2338 0.3916 23.004 21.4636
FVB/NJ both 24.1875 0.415 25.0039 23.3711
MOLF/EiJ both 13.2856 0.4244 14.1203 12.4509
SJL/J both 22.341 0.407 23.1415 21.5405
SM/J both 16.2313 0.4353 17.0875 15.3751
SPRET/EiJ both 13.1943 0.501 14.1797 12.2088




  GWAS USING LINEAR MIXED MODELS