Phenotype measure:   Brown1   groom_EZM


  STRAIN COMPARISON PLOT
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Brown1 - grooming duration



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains13 strains
Mean of the strain means0.690   s 1.37   s
Median of the strain means0.220   s 0.247   s
SD of the strain means± 1.45 ± 2.64
Coefficient of variation (CV)2.10 1.93
Min–max range of strain means0   –   4.90   s 0   –   8.89   s
Mean sample size per strain10.1   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 76.5071 76.5071 16.2699 0.0001
strain 9 408.815 45.4239 9.6598 < 0.0001
sex:strain 9 265.3605 29.4845 6.2701 < 0.0001
Residuals 170 799.4036 4.7024


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   10 0.0 0.0 -0.48
129S1/SvImJ m 2.64 4.82   10 1.52 1.83 0.48
A/J f 0.0 0.0   12 0.0 0.0 -0.48
A/J m 0.422 0.881   6 0.36 2.09 -0.36
AKR/J f 0.0 0.0   12 0.0 0.0 -0.48
AKR/J m 0.0 0.0   6 0.0 0.0 -0.52
BALB/cByJ f 0.24 0.769   22 0.164 3.2 -0.31
BALB/cByJ m 0.347 0.833   12 0.241 2.4 -0.39
BALB/cJ f 0.553 1.34   14 0.357 2.41 -0.09
BALB/cJ m 0.187 0.487   10 0.154 2.6 -0.45
C57BL/6J f 1.28 2.49   10 0.786 1.95 0.41
C57BL/6J m 8.89 7.13   10 2.25 0.801 2.85
CAST/EiJ f 0.0 0.0   2   0.0 0.0 -0.48
CAST/EiJ m 0.0 0.0   5 0.0 0.0 -0.52
DBA/2J f 0.393 0.963   6 0.393 2.45 -0.2
DBA/2J m 0.247 0.781   10 0.247 3.16 -0.43
FVB/NJ f 0.22 0.762   12 0.22 3.46 -0.32
FVB/NJ m 0.448 1.05   12 0.302 2.34 -0.35
MOLF/EiJ m 0.0 0.0   10 0.0 0.0 -0.52
SJL/J f 0.0 0.0   6 0.0 0.0 -0.48
SJL/J m 0.0 0.0   3 0.0 0.0 -0.52
SM/J m 4.64 3.0   6 1.23 0.647 1.24
SPRET/EiJ f 4.9 8.82   9 2.94 1.8 2.91
SPRET/EiJ m 0.0 0.0   1   0.0 0.0 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.6857 1.3537 -1.3537
129S1/SvImJ m 2.638 0.6857 3.9917 1.2843
A/J f 0.0 0.626 1.2357 -1.2357
A/J m 0.4217 0.8853 2.1692 -1.3259
AKR/J f 0.0 0.626 1.2357 -1.2357
AKR/J m 0.0 0.8853 1.7476 -1.7476
BALB/cByJ f 0.24 0.4623 1.1526 -0.6726
BALB/cByJ m 0.3467 0.626 1.5824 -0.889
BALB/cJ f 0.5529 0.5796 1.6969 -0.5912
BALB/cJ m 0.187 0.6857 1.5407 -1.1667
C57BL/6J f 1.276 0.6857 2.6297 -0.0777
C57BL/6J m 8.893 0.6857 10.2467 7.5393
CAST/EiJ f 0.0 1.5334 3.0269 -3.0269
CAST/EiJ m 0.0 0.9698 1.9144 -1.9144
DBA/2J f 0.3933 0.8853 2.1409 -1.3542
DBA/2J m 0.247 0.6857 1.6007 -1.1067
FVB/NJ f 0.22 0.626 1.4557 -1.0157
FVB/NJ m 0.4483 0.626 1.684 -0.7874
SJL/J f 0.0 0.8853 1.7476 -1.7476
SJL/J m 0.0 1.252 2.4714 -2.4714


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.319 0.4849 2.2762 0.3618
A/J both 0.2108 0.5421 1.281 -0.8593
AKR/J both 0.0 0.5421 1.0702 -1.0702
BALB/cByJ both 0.2933 0.3891 1.0614 -0.4748
BALB/cJ both 0.3699 0.4489 1.2561 -0.5162
C57BL/6J both 5.0845 0.4849 6.0417 4.1273
CAST/EiJ both 0.0 0.9071 1.7907 -1.7907
DBA/2J both 0.3202 0.5599 1.4254 -0.7851
FVB/NJ both 0.3342 0.4426 1.208 -0.5396
SJL/J both 0.0 0.7667 1.5134 -1.5134




  GWAS USING LINEAR MIXED MODELS