Phenotype measure:   Brown1   groom_d1_OFT


  STRAIN COMPARISON PLOT
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Brown1 - grooming duration, day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means5.13   s 4.41   s
Median of the strain means1.78   s 3.27   s
SD of the strain means± 7.49 ± 5.24
Coefficient of variation (CV)1.46 1.19
Min–max range of strain means0.596   –   28.0   s 0.440   –   21.4   s
Mean sample size per strain12.8   mice 13.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 24.6556 24.6556 0.6054 0.4371
strain 13 13056.6677 1004.3591 24.6618 < 0.0001
sex:strain 13 904.9509 69.6116 1.7093 0.0573
Residuals 344 14009.5269 40.7254


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.08 1.93   12 0.556 1.78 -0.54
129S1/SvImJ m 1.65 2.18   12 0.63 1.32 -0.53
A/J f 1.19 2.33   12 0.672 1.95 -0.53
A/J m 5.85 11.9   20 2.67 2.04 0.27
AKR/J f 2.07 2.3   12 0.664 1.11 -0.41
AKR/J m 2.13 3.14   19 0.72 1.47 -0.43
BALB/cByJ f 0.992 3.42   22 0.729 3.44 -0.55
BALB/cByJ m 0.762 1.3   12 0.376 1.71 -0.7
BALB/cJ f 1.16 1.66   14 0.443 1.43 -0.53
BALB/cJ m 1.77 4.18   12 1.21 2.36 -0.5
C3H/HeJ f 1.5 2.78   18 0.656 1.85 -0.48
C3H/HeJ m 3.08 3.07   16 0.768 0.995 -0.25
C57BL/6J f 5.54 4.45   12 1.28 0.802 0.06
C57BL/6J m 6.01 4.56   13 1.26 0.759 1.76, 18.8 0.31
CAST/EiJ f 2.74 2.05   10 0.648 0.748 -0.32
CAST/EiJ m 3.71 2.36   10 0.748 0.637 -0.13
DBA/2J f 12.7 12.8   14 3.42 1.01 1.01
DBA/2J m 6.21 7.69   13 2.13 1.24 0.34
FVB/NJ f 0.596 0.952   12 0.275 1.6 -0.6
FVB/NJ m 1.46 1.43   12 0.413 0.979 -0.56
MOLF/EiJ f 0.932 2.96   12 0.855 3.18 -0.56
MOLF/EiJ m 0.44 0.881   11 0.266 2.0 -0.76
SJL/J f 4.0 3.97   13 1.1 0.993 -0.15
SJL/J m 3.81 2.81   12 0.812 0.738 -0.11
SM/J f 9.28 7.4   10 2.34 0.798 2.25, 27.5 0.55
SM/J m 3.46 3.61   12 1.04 1.04 -0.18
SPRET/EiJ f 28.0 20.2   13 5.61 0.723 3.05
SPRET/EiJ m 21.4 8.53   12 2.46 0.398 5.55, 35.4 3.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0817 1.8422 4.7051 0.0
129S1/SvImJ m 1.6525 1.8422 5.2759 0.0
A/J f 1.1942 1.8422 4.8176 0.0
A/J m 5.853 1.427 8.6597 3.0463
AKR/J f 2.0733 1.8422 5.6968 0.0
AKR/J m 2.1311 1.464 5.0107 0.0
BALB/cByJ f 0.9923 1.3606 3.6684 0.0
BALB/cByJ m 0.7617 1.8422 4.3851 0.0
BALB/cJ f 1.1571 1.7056 4.5118 0.0
BALB/cJ m 1.7692 1.8422 5.3926 0.0
C3H/HeJ f 1.5006 1.5042 4.4591 0.0
C3H/HeJ m 3.085 1.5954 6.223 0.0
C57BL/6J f 5.5442 1.8422 9.1676 1.9207
C57BL/6J m 6.0077 1.7699 9.489 2.5264
CAST/EiJ f 2.741 2.0181 6.7103 0.0
CAST/EiJ m 3.709 2.0181 7.6783 0.0
DBA/2J f 12.6936 1.7056 16.0482 9.3389
DBA/2J m 6.2146 1.7699 9.6959 2.7333
FVB/NJ f 0.5958 1.8422 4.2193 0.0
FVB/NJ m 1.4617 1.8422 5.0851 0.0
MOLF/EiJ f 0.9317 1.8422 4.5551 0.0
MOLF/EiJ m 0.44 1.9241 4.2246 0.0
SJL/J f 4.0 1.7699 7.4813 0.5187
SJL/J m 3.81 1.8422 7.4334 0.1866
SM/J f 9.276 2.0181 13.2453 5.3067
SM/J m 3.455 1.8422 7.0784 0.0
SPRET/EiJ f 27.9692 1.7699 31.4505 24.4879
SPRET/EiJ m 21.4292 1.8422 25.0526 17.8057


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.3671 1.3026 3.9292 0.0
A/J both 3.5236 1.1651 5.8152 1.2319
AKR/J both 2.1022 1.1766 4.4164 0.0
BALB/cByJ both 0.877 1.1451 3.1292 0.0
BALB/cJ both 1.4632 1.2553 3.9321 0.0
C3H/HeJ both 2.2928 1.0963 4.4492 0.1364
C57BL/6J both 5.7759 1.2774 8.2883 3.2635
CAST/EiJ both 3.225 1.427 6.0317 0.4183
DBA/2J both 9.4541 1.229 11.8714 7.0368
FVB/NJ both 1.0287 1.3026 3.5909 0.0
MOLF/EiJ both 0.6858 1.3319 3.3056 0.0
SJL/J both 3.905 1.2774 6.4174 1.3926
SM/J both 6.3655 1.3662 9.0527 3.6783
SPRET/EiJ both 24.6992 1.2774 27.2116 22.1868




  GWAS USING LINEAR MIXED MODELS