Project measure / variable:   Willott1   ASR_90

ID, description, units MPD:9104   ASR_90   acoustic startle response (ASR)   [amplitude]  evoked by 90 dB sound pressure level  
Data set, strains Willott1   inbred w/CC7   40 strains     sex: both     age: 5-6wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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Willott1 - acoustic startle response (ASR) evoked by 90 dB sound pressure level

A/JSEA/GnJBUB/BnJNZW/LacJBALB/cJFVB/NJMA/MyJCE/JRIIIS/JSM/JAKR/JKK/HlJC57BLKS/JSWR/JCBA/JPL/J129S1/SvImJC57BL/10JC58/JC57BL/6JSPRET/EiJCZECHII/EiJBTBR T<+> Itpr3<tf>/JJF1/MsJI/LnJCAST/EiJNZB/BlNJNOD/ShiLtJPERA/EiJC3H/HeJDBA/2JPWK/PhJWSB/EiJC57BR/cdJNON/ShiLtJLP/JMSM/MsJSJL/JC57L/JMOLF/EiJ amplitude 02004006008001,0001,2001,4001,600femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested40 strains40 strains
Mean of the strain means345   amplitude 352   amplitude
Median of the strain means312   amplitude 279   amplitude
SD of the strain means± 205 ± 224
Coefficient of variation (CV)0.594 0.637
Min–max range of strain means67.8   –   850   amplitude 68.0   –   829   amplitude
Mean sample size per strain10.1   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15.667 15.667 0.0003 0.9851
strain 39 33793291.8417 866494.6626 19.3356 < 0.0001
sex:strain 39 2540959.2489 65152.8013 1.4539 0.0383
Residuals 725 32489795.0148 44813.5104


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 80 (80)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 306.0 113.0   10 35.6 0.368 130.0, 458.0 -0.19
129S1/SvImJ m 419.0 278.0   10 88.0 0.665 158.0, 1008.0 0.3
A/J f 718.0 274.0   10 86.5 0.381 392.0, 1168.0 1.82
A/J m 808.0 346.0   10 109.0 0.428 438.0, 1513.0 2.03
AKR/J f 466.0 240.0   10 75.8 0.514 126.0, 808.0 0.59
AKR/J m 540.0 208.0   10 65.9 0.386 268.0, 901.0 0.84
BALB/cJ f 548.0 185.0   18 43.7 0.339 238.0, 1006.0 0.99
BALB/cJ m 726.0 365.0   10 115.0 0.503 280.0, 1680.0 1.67
BTBR T+ Itpr3tf/J f 169.0 55.9   10 17.7 0.33 96.5, 248.0 -0.86
BTBR T+ Itpr3tf/J m 282.0 174.0   10 55.0 0.617 82.3, 556.0 -0.31
BUB/BnJ f 703.0 392.0   10 124.0 0.557 218.0, 1608.0 1.75
BUB/BnJ m 741.0 346.0   10 109.0 0.467 59.4, 1110.0 1.73
C3H/HeJ f 139.0 92.8   10 29.4 0.667 54.7, 356.0 -1.0
C3H/HeJ m 207.0 127.0   10 40.1 0.611 87.3, 516.0 -0.65
C57BL/10J f 423.0 231.0   10 73.0 0.546 102.0, 774.0 0.38
C57BL/10J m 276.0 112.0   10 35.5 0.407 101.0, 450.0 -0.34
C57BL/6J f 319.0 154.0   11 46.5 0.484 129.0, 664.0 -0.13
C57BL/6J m 310.0 140.0   10 44.3 0.451 120.0, 594.0 -0.19
C57BLKS/J f 432.0 181.0   10 57.3 0.42 167.0, 664.0 0.43
C57BLKS/J m 495.0 357.0   10 113.0 0.722 105.0, 1044.0 0.64
C57BR/cdJ f 160.0 109.0   10 34.6 0.683 67.0, 450.0 -0.9
C57BR/cdJ m 135.0 74.5   10 23.6 0.552 45.5, 301.0 -0.97
C57L/J f 103.0 27.6   10 8.73 0.267 63.7, 160.0 -1.18
C57L/J m 78.8 25.8   10 8.17 0.328 58.1, 144.0 -1.22
C58/J f 397.0 261.0   10 82.5 0.657 142.0, 924.0 0.26
C58/J m 301.0 173.0   10 54.6 0.573 112.0, 639.0 -0.23
CAST/EiJ f 172.0 68.2   10 21.6 0.396 81.3, 332.0 -0.84
CAST/EiJ m 246.0 193.0   10 61.2 0.787 68.8, 668.0 -0.47
CBA/J f 400.0 237.0   9 79.0 0.593 165.0, 897.0 0.27
CBA/J m 485.0 460.0   10 146.0 0.949 169.0, 1664.0 0.59
CE/J f 496.0 243.0   10 76.7 0.489 99.5, 859.0 0.74
CE/J m 660.0 196.0   10 62.1 0.298 338.0, 976.0 1.37
CZECHII/EiJ f 251.0 168.0   9 55.8 0.669 75.0, 610.0 -0.46
CZECHII/EiJ m 221.0 95.2   11 28.7 0.43 48.6, 426.0 -0.58
DBA/2J f 146.0 50.1   10 15.8 0.342 58.5, 212.0 -0.97
DBA/2J m 173.0 88.5   10 28.0 0.512 72.2, 352.0 -0.8
FVB/NJ f 496.0 196.0   10 61.9 0.395 167.0, 784.0 0.74
FVB/NJ m 670.0 343.0   10 109.0 0.513 184.0, 1248.0 1.42
I/LnJ f 245.0 156.0   10 49.4 0.636 78.3, 585.0 -0.49
I/LnJ m 183.0 111.0   10 35.2 0.608 66.0, 440.0 -0.75
JF1/MsJ f 167.0 174.0   10 54.9 1.04 34.0, 526.0 -0.87
JF1/MsJ m 266.0 304.0   10 96.0 1.14 41.0, 796.0 -0.38
KK/HlJ f 508.0 208.0   10 65.8 0.41 260.0, 924.0 0.8
KK/HlJ m 477.0 285.0   10 90.0 0.596 188.0, 1220.0 0.56
LP/J f 125.0 57.1   10 18.0 0.457 55.6, 247.0 -1.07
LP/J m 153.0 131.0   10 41.4 0.856 60.9, 450.0 -0.89
MA/MyJ f 548.0 304.0   10 96.2 0.555 152.0, 1033.0 0.99
MA/MyJ m 613.0 278.0   10 87.9 0.453 246.0, 1080.0 1.16
MOLF/EiJ f 67.8 12.2   10 3.86 0.18 47.3, 83.8 -1.35
MOLF/EiJ m 68.0 15.8   10 4.98 0.232 46.1, 93.7 -1.27
MSM/MsJ f 123.0 45.7   10 14.4 0.372 76.7, 200.0 -1.08
MSM/MsJ m 120.0 83.0   10 26.2 0.69 55.2, 318.0 -1.04
NOD/ShiLtJ f 125.0 106.0   10 33.5 0.849 58.6, 420.0 -1.07
NOD/ShiLtJ m 228.0 209.0   10 65.9 0.913 55.6, 670.0 -0.55
NON/ShiLtJ f 160.0 97.7   11 29.5 0.61 86.2, 357.0 -0.9
NON/ShiLtJ m 127.0 98.7   9 32.9 0.778 44.9, 322.0 -1.0
NZB/BlNJ f 269.0 102.0   10 32.2 0.378 148.0, 420.0 -0.37
NZB/BlNJ m 136.0 83.9   10 26.5 0.619 62.1, 280.0 -0.96
NZW/LacJ f 850.0 417.0   10 132.0 0.49 190.0, 1634.0 2.47
NZW/LacJ m 528.0 299.0   10 94.5 0.566 188.0, 1223.0 0.78
PERA/EiJ f 197.0 45.7   10 14.5 0.233 130.0, 258.0 -0.72
PERA/EiJ m 151.0 65.7   10 20.8 0.434 70.5, 277.0 -0.9
PL/J f 452.0 203.0   10 64.1 0.449 244.0, 864.0 0.52
PL/J m 328.0 170.0   10 53.8 0.52 116.0, 625.0 -0.11
PWK/PhJ f 158.0 81.0   8 28.6 0.512 83.2, 331.0 -0.91
PWK/PhJ m 158.0 33.9   10 10.7 0.215 110.0, 204.0 -0.87
RIIIS/J f 560.0 327.0   10 103.0 0.584 165.0, 1180.0 1.05
RIIIS/J m 578.0 276.0   10 87.2 0.477 69.5, 959.0 1.01
SEA/GnJ f 641.0 292.0   14 78.1 0.456 208.0, 1306.0 1.45
SEA/GnJ m 829.0 388.0   10 123.0 0.468 446.0, 1604.0 2.12
SJL/J f 122.0 47.9   10 15.1 0.393 59.4, 208.0 -1.09
SJL/J m 93.5 26.7   10 8.43 0.285 57.5, 142.0 -1.15
SM/J f 519.0 298.0   10 94.2 0.574 277.0, 1124.0 0.85
SM/J m 572.0 342.0   10 108.0 0.599 103.0, 1095.0 0.98
SPRET/EiJ f 432.0 196.0   10 62.1 0.455 176.0, 784.0 0.43
SPRET/EiJ m 172.0 69.0   10 21.8 0.402 75.0, 292.0 -0.8
SWR/J f 542.0 180.0   10 56.8 0.332 161.0, 736.0 0.96
SWR/J m 357.0 191.0   10 60.4 0.536 86.0, 748.0 0.02
WSB/EiJ f 135.0 53.4   7 20.2 0.397 84.8, 242.0 -1.02
WSB/EiJ m 179.0 66.0   8 23.3 0.369 79.5, 262.0 -0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 306.2 66.9429 437.6251 174.7749
129S1/SvImJ m 418.55 66.9429 549.9751 287.1249
A/J f 717.55 66.9429 848.9751 586.1249
A/J m 808.15 66.9429 939.5751 676.7249
AKR/J f 466.15 66.9429 597.5751 334.7249
AKR/J m 539.5 66.9429 670.9251 408.0749
BALB/cJ f 547.5556 49.8963 645.514 449.5971
BALB/cJ m 725.85 66.9429 857.2751 594.4249
BTBR T+ Itpr3tf/J f 169.365 66.9429 300.7901 37.9399
BTBR T+ Itpr3tf/J m 281.88 66.9429 413.3051 150.4549
BUB/BnJ f 702.6 66.9429 834.0251 571.1749
BUB/BnJ m 741.035 66.9429 872.4601 609.6099
C3H/HeJ f 139.125 66.9429 270.5501 7.6999
C3H/HeJ m 207.45 66.9429 338.8751 76.0249
C57BL/10J f 422.835 66.9429 554.2601 291.4099
C57BL/10J m 275.72 66.9429 407.1451 144.2949
C57BL/6J f 318.9091 63.8275 444.218 193.6002
C57BL/6J m 310.4 66.9429 441.8251 178.9749
C57BLKS/J f 431.75 66.9429 563.1751 300.3249
C57BLKS/J m 495.065 66.9429 626.4901 363.6399
C57BR/cdJ f 159.92 66.9429 291.3451 28.4949
C57BR/cdJ m 134.995 66.9429 266.4201 3.5699
C57L/J f 103.435 66.9429 234.8601 0.0
C57L/J m 78.75 66.9429 210.1751 0.0
C58/J f 396.885 66.9429 528.3101 265.4599
C58/J m 301.08 66.9429 432.5051 169.6549
CAST/EiJ f 172.05 66.9429 303.4751 40.6249
CAST/EiJ m 245.865 66.9429 377.2901 114.4399
CBA/J f 399.8333 70.564 538.3675 261.2992
CBA/J m 484.865 66.9429 616.2901 353.4399
CE/J f 495.85 66.9429 627.2751 364.4249
CE/J m 659.7 66.9429 791.1251 528.2749
CZECHII/EiJ f 250.5556 70.564 389.0897 112.0214
CZECHII/EiJ m 221.1955 63.8275 346.5043 95.8866
DBA/2J f 146.22 66.9429 277.6451 14.7949
DBA/2J m 172.815 66.9429 304.2401 41.3899
FVB/NJ f 495.665 66.9429 627.0901 364.2399
FVB/NJ m 669.5 66.9429 800.9251 538.0749
I/LnJ f 245.265 66.9429 376.6901 113.8399
I/LnJ m 183.22 66.9429 314.6451 51.7949
JF1/MsJ f 167.265 66.9429 298.6901 35.8399
JF1/MsJ m 265.715 66.9429 397.1401 134.2899
KK/HlJ f 507.7 66.9429 639.1251 376.2749
KK/HlJ m 477.15 66.9429 608.5751 345.7249
LP/J f 124.965 66.9429 256.3901 0.0
LP/J m 153.07 66.9429 284.4951 21.6449
MA/MyJ f 547.95 66.9429 679.3751 416.5249
MA/MyJ m 613.05 66.9429 744.4751 481.6249
MOLF/EiJ f 67.845 66.9429 199.2701 0.0
MOLF/EiJ m 68.025 66.9429 199.4501 0.0
MSM/MsJ f 122.865 66.9429 254.2901 0.0
MSM/MsJ m 120.355 66.9429 251.7801 0.0
NOD/ShiLtJ f 124.615 66.9429 256.0401 0.0
NOD/ShiLtJ m 228.265 66.9429 359.6901 96.8399
NON/ShiLtJ f 160.3 63.8275 285.6089 34.9911
NON/ShiLtJ m 126.8333 70.564 265.3675 0.0
NZB/BlNJ f 269.085 66.9429 400.5101 137.6599
NZB/BlNJ m 135.66 66.9429 267.0851 4.2349
NZW/LacJ f 850.2 66.9429 981.6251 718.7749
NZW/LacJ m 528.2 66.9429 659.6251 396.7749
PERA/EiJ f 196.65 66.9429 328.0751 65.2249
PERA/EiJ m 151.335 66.9429 282.7601 19.9099
PL/J f 451.9 66.9429 583.3251 320.4749
PL/J m 327.65 66.9429 459.0751 196.2249
PWK/PhJ f 158.0437 74.8444 304.9814 11.1061
PWK/PhJ m 157.855 66.9429 289.2801 26.4299
RIIIS/J f 559.7 66.9429 691.1251 428.2749
RIIIS/J m 578.45 66.9429 709.8751 447.0249
SEA/GnJ f 640.8571 56.5771 751.9316 529.7827
SEA/GnJ m 828.7 66.9429 960.1251 697.2749
SJL/J f 121.765 66.9429 253.1901 0.0
SJL/J m 93.485 66.9429 224.9101 0.0
SM/J f 518.85 66.9429 650.2751 387.4249
SM/J m 571.515 66.9429 702.9401 440.0899
SPRET/EiJ f 431.55 66.9429 562.9751 300.1249
SPRET/EiJ m 171.75 66.9429 303.1751 40.3249
SWR/J f 541.765 66.9429 673.1901 410.3399
SWR/J m 356.735 66.9429 488.1601 225.3099
WSB/EiJ f 134.6429 80.0121 291.7259 0.0
WSB/EiJ m 179.1688 74.8444 326.1064 32.2311


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 362.375 47.3358 455.3066 269.4434
A/J both 762.85 47.3358 855.7816 669.9184
AKR/J both 502.825 47.3358 595.7566 409.8934
BALB/cJ both 636.7028 41.7462 718.6607 554.7449
BTBR T+ Itpr3tf/J both 225.6225 47.3358 318.5541 132.6909
BUB/BnJ both 721.8175 47.3358 814.7491 628.8859
C3H/HeJ both 173.2875 47.3358 266.2191 80.3559
C57BL/10J both 349.2775 47.3358 442.2091 256.3459
C57BL/6J both 314.6545 46.2474 405.4495 223.8596
C57BLKS/J both 463.4075 47.3358 556.3391 370.4759
C57BR/cdJ both 147.4575 47.3358 240.3891 54.5259
C57L/J both 91.0925 47.3358 184.0241 0.0
C58/J both 348.9825 47.3358 441.9141 256.0509
CAST/EiJ both 208.9575 47.3358 301.8891 116.0259
CBA/J both 442.3492 48.6329 537.8273 346.8711
CE/J both 577.775 47.3358 670.7066 484.8434
CZECHII/EiJ both 235.8755 47.5742 329.2752 142.4758
DBA/2J both 159.5175 47.3358 252.4491 66.5859
FVB/NJ both 582.5825 47.3358 675.5141 489.6509
I/LnJ both 214.2425 47.3358 307.1741 121.3109
JF1/MsJ both 216.49 47.3358 309.4216 123.5584
KK/HlJ both 492.425 47.3358 585.3566 399.4934
LP/J both 139.0175 47.3358 231.9491 46.0859
MA/MyJ both 580.5 47.3358 673.4316 487.5684
MOLF/EiJ both 67.935 47.3358 160.8666 0.0
MSM/MsJ both 121.61 47.3358 214.5416 28.6784
NOD/ShiLtJ both 176.44 47.3358 269.3716 83.5084
NON/ShiLtJ both 143.5667 47.5742 236.9664 50.1669
NZB/BlNJ both 202.3725 47.3358 295.3041 109.4409
NZW/LacJ both 689.2 47.3358 782.1316 596.2684
PERA/EiJ both 173.9925 47.3358 266.9241 81.0609
PL/J both 389.775 47.3358 482.7066 296.8434
PWK/PhJ both 157.9494 50.2072 256.5182 59.3806
RIIIS/J both 569.075 47.3358 662.0066 476.1434
SEA/GnJ both 734.7786 43.8244 820.8165 648.7407
SJL/J both 107.625 47.3358 200.5566 14.6934
SM/J both 545.1825 47.3358 638.1141 452.2509
SPRET/EiJ both 301.65 47.3358 394.5816 208.7184
SWR/J both 449.25 47.3358 542.1816 356.3184
WSB/EiJ both 156.9058 54.7805 264.4532 49.3584




  GWAS USING LINEAR MIXED MODELS

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