Project measure / variable:   CSNA03   dist_l60_cont_in_d2

ID, description, units MPD:90388   dist_l60_cont_in_d2   distance traveled, last 60 min (post-injection), on successive days, saline control, founders   [cm]  day 2  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, last 60 min (post-injection), on successive days, saline control, founders day 2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means12574.0   cm 7644.0   cm
Median of the strain means7691.0   cm 8848.0   cm
SD of the strain means± 13034.0 ± 6357.0
Coefficient of variation (CV)1.0366 0.8316
Min–max range of strain means492.5   –   38381.0   cm 488.2   –   17401.0   cm
Mean sample size per strain6.8   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 589435163.6623 589435163.6623 4.578 0.0348
strain 8 8955996699.2939 1119499587.4117 8.6949 < 0.0001
sex:strain 8 1643029511.9947 205378688.9993 1.5951 0.1354
Residuals 102 13132797228.0509 128752914.0005


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 492.5 562.5   8 198.9 1.1422 -0.93
129S1/SvImJ m 488.2 624.3   8 220.7 1.279 -1.13
A/J f 924.4 469.8   6 191.8 0.5082 286.5, 1402.0 -0.89
A/J m 1366.0 755.9   8 267.3 0.5536 744.2, 2927.0 -0.99
C57BL/6J f 7691.0 2280.0   7 861.8 0.2965 4889.0, 10962.0 -0.37
C57BL/6J m 8848.0 1958.0   6 799.3 0.2213 7082.0, 12516.0 0.19
CAST/EiJ f 19254.0 11762.0   7 4446.0 0.6109 9898.0, 44560.0 0.51
CAST/EiJ m 12112.0 4304.0   7 1627.0 0.3553 7147.0, 20087.0 0.7
DBA/2J f 3773.0 2196.0   3 1268.0 0.5821 1280.0, 5422.0 -0.68
DBA/2J m 2778.0 427.1   2   302.0 0.1537 2476.0, 3080.0 -0.77
NOD/ShiLtJ f 38381.0 53588.0   5 23965.0 1.3962 10114.0, 133929.0 1.98
NOD/ShiLtJ m 11887.0 4579.0   5 2048.0 0.3852 5719.0, 16623.0 0.67
NZO/HlLtJ f 1117.0 657.5   10 207.9 0.5887 453.2, 2337.0 -0.88
NZO/HlLtJ m 899.4 563.1   9 187.7 0.6261 273.7, 2260.0 -1.06
PWK/PhJ f 20792.0 5124.0   8 1812.0 0.2464 12617.0, 28142.0 0.63
PWK/PhJ m 17401.0 5424.0   7 2050.0 0.3117 11929.0, 27346.0 1.53
WSB/EiJ f 20739.0 5014.0   7 1895.0 0.2418 14594.0, 29950.0 0.63
WSB/EiJ m 13016.0 2353.0   7 889.5 0.1808 10014.0, 16652.0 0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 492.475 4011.7470321622 8449.7562168475 -7464.8062168474
129S1/SvImJ m 488.153625 4011.7470321622 8445.4348418474 -7469.1275918474
A/J f 924.4 4632.3664578791 10112.6769051289 -8263.8769051288
A/J m 1365.6 4011.7470321622 9322.8812168474 -6591.6812168474
C57BL/6J f 7691.2857142857 4288.7379762166 16197.9771553299 -815.4057267585
C57BL/6J m 8848.0 4632.3664578791 18036.2769051289 -340.2769051289
CAST/EiJ f 19253.8571428572 4288.7379762166 27760.5485839014 10747.1657018129
CAST/EiJ m 12111.7142857143 4288.7379762166 20618.4057267585 3605.0228446701
DBA/2J f 3773.0 6551.1554706148 16767.1858140727 -9221.1858140727
DBA/2J m 2778.0 8023.4940643244 18692.5624336949 -13136.5624336949
NOD/ShiLtJ f 38381.3999999999 5074.5032072213 48446.6530510855 28316.1469489143
NOD/ShiLtJ m 11886.5999999999 5074.5032072214 21951.8530510855 1821.3469489142
NZO/HlLtJ f 1116.87 3588.2156289791 8234.0786867813 -6000.3386867812
NZO/HlLtJ m 899.4444444444 3782.3113744625 8401.6411220993 -6602.7522332105
PWK/PhJ f 20791.5 4011.7470321622 28748.7812168475 12834.2187831526
PWK/PhJ m 17401.2857142857 4288.7379762166 25907.97715533 8894.5942732415
WSB/EiJ f 20739.2857142857 4288.7379762166 29245.97715533 12232.5942732415
WSB/EiJ m 13016.2857142857 4288.7379762166 21522.9771553299 4509.5942732415


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 490.3143125 2836.7335308469 6116.9618207412 -5136.3331957412
A/J both 1145.0 3064.0224073163 7222.4739170423 -4932.4739170423
C57BL/6J both 8269.6428571429 3156.425685357 14530.3982380546 2008.8874762312
CAST/EiJ both 15682.7857142857 3032.595705715 21697.9249177097 9667.6465108618
DBA/2J both 3275.5 5179.1431482538 13548.3058779798 -6997.3058779797
NOD/ShiLtJ both 25133.9999999999 3588.2156289791 32251.2086867811 18016.7913132186
NZO/HlLtJ both 1008.1572222222 2606.7782190589 6178.6894598504 -4162.375015406
PWK/PhJ both 19096.3928571429 2936.2981660036 24920.5263471379 13272.2593671478
WSB/EiJ both 16877.7857142857 3032.595705715 22892.9249177097 10862.6465108618




  GWAS USING LINEAR MIXED MODELS