Project measure / variable:   CSNA03   dist_f30_cont_in_d19

ID, description, units MPD:90376   dist_f30_cont_in_d19   distance traveled, first 30 min (pre-injection), on successive days, saline group, founders   [cm]  day 19  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, saline group, founders day 19



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6373.0   cm 5693.0   cm
Median of the strain means6115.0   cm 7299.0   cm
SD of the strain means± 4286.0 ± 3705.0
Coefficient of variation (CV)0.6724 0.6508
Min–max range of strain means529.0   –   12750.0   cm 581.1   –   10114.0   cm
Mean sample size per strain6.8   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 28719166.4835 28719166.4835 5.5352 0.0205
strain 8 1845108684.9799 230638585.6225 44.452 < 0.0001
sex:strain 8 35465687.0428 4433210.8804 0.8544 0.5574
Residuals 103 534414209.1201 5188487.4672


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 529.0 596.6   8 210.9 1.1277 -1.36
129S1/SvImJ m 581.1 900.3   8 318.3 1.5494 12.7, 2316.0 -1.38
A/J f 2326.0 1134.0   6 462.9 0.4875 90.55, 3163.0 -0.94
A/J m 1500.0 735.8   8 260.1 0.4907 143.9, 2282.0 -1.13
C57BL/6J f 6115.0 1089.0   7 411.5 0.1781 4801.0, 7830.0 -0.06
C57BL/6J m 5974.0 1342.0   6 547.9 0.2246 3792.0, 7619.0 0.08
CAST/EiJ f 12750.0 2353.0   7 889.3 0.1845 9345.0, 16889.0 1.49
CAST/EiJ m 10114.0 3649.0   7 1379.0 0.3608 5254.0, 16887.0 1.19
DBA/2J f 5564.0 303.9   3 175.4 0.0546 5241.0, 5844.0 -0.19
DBA/2J m 7946.0 2949.0   2   2086.0 0.3711 5861.0, 10032.0 0.61
NOD/ShiLtJ f 9992.0 8282.0   5 3704.0 0.8288 90.97, 21174.0 0.84
NOD/ShiLtJ m 9074.0 1568.0   5 701.2 0.1728 7195.0, 11053.0 0.91
NZO/HlLtJ f 1479.0 679.4   10 214.9 0.4595 299.3, 2809.0 -1.14
NZO/HlLtJ m 916.7 483.6   9 161.2 0.5276 350.8, 1757.0 -1.29
PWK/PhJ f 8667.0 1373.0   8 485.5 0.1584 7092.0, 10502.0 0.54
PWK/PhJ m 7299.0 1747.0   8 617.8 0.2394 4611.0, 10696.0 0.43
WSB/EiJ f 9938.0 2310.0   7 873.0 0.2324 7663.0, 13829.0 0.83
WSB/EiJ m 7836.0 1878.0   7 709.8 0.2397 5753.0, 11342.0 0.58


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 529.0001625 805.3328090909 2126.1878473796 -1068.1875223796
129S1/SvImJ m 581.08125 805.3328090909 2178.2689348796 -1016.1064348796
A/J f 2325.7583333333 929.9182282317 4170.0318129566 481.4848537101
A/J m 1499.575 805.3328090909 3096.7626848796 -97.6126848796
C57BL/6J f 6114.5714285714 860.9369868418 7822.0368854841 4407.1059716588
C57BL/6J m 5974.5 929.9182282317 7818.7734796232 4130.2265203768
CAST/EiJ f 12749.8571428571 860.9369868418 14457.3225997698 11042.3916859445
CAST/EiJ m 10113.5714285714 860.9369868418 11821.0368854841 8406.1059716588
DBA/2J f 5564.3333333333 1315.1029702633 8172.5299009415 2956.1367657251
DBA/2J m 7946.5 1610.6656181818 11140.8753697593 4752.1246302407
NOD/ShiLtJ f 9991.794 1018.6743804755 12012.0943739963 7971.4936260036
NOD/ShiLtJ m 9074.2 1018.6743804755 11094.5003739964 7053.8996260036
NZO/HlLtJ f 1478.75 720.3115622552 2907.3180944865 50.1819055134
NZO/HlLtJ m 916.7333333333 759.2750538936 2422.5763237414 -589.1096570747
PWK/PhJ f 8667.375 805.3328090909 10264.5626848796 7070.1873151204
PWK/PhJ m 7298.625 805.3328090909 8895.8126848796 5701.4373151204
WSB/EiJ f 9937.5714285714 860.9369868418 11645.0368854841 8230.1059716588
WSB/EiJ m 7835.5714285714 860.9369868418 9543.0368854841 6128.1059716588


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 555.04070625 569.4562904202 1684.422949056 -574.341536556
A/J both 1912.6666666667 615.0830928817 3132.5389108354 692.794422498
C57BL/6J both 6044.5357142857 633.6324657303 7301.196264533 4787.8751640384
CAST/EiJ both 11431.7142857143 608.7743815702 12639.074688939 10224.3538824896
DBA/2J both 6755.4166666667 1039.6801859211 8817.3771014355 4693.4562318979
NOD/ShiLtJ both 9532.997 720.3115622552 10961.5650944865 8104.4289055134
NZO/HlLtJ both 1197.7416666667 523.2942179557 2235.5723263056 159.9110070278
PWK/PhJ both 7983.0 569.4562904202 9112.382242806 6853.617757194
WSB/EiJ both 8886.5714285714 608.7743815702 10093.9318317961 7679.2110253467




  GWAS USING LINEAR MIXED MODELS