Project measure / variable:   CSNA03   dist_f30_cocaine_do_d11

ID, description, units MPD:90369   dist_f30_cocaine_do_d11   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, DO   [cm]  day 11  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means7221.0   cm 6646.0   cm
Median of the strain means6046.0   cm 6309.0   cm
SD of the strain means± 4943.0 ± 4325.0
Coefficient of variation (CV)0.6845 0.6508
Min–max range of strain means1195.0   –   15181.0   cm 1083.0   –   13783.0   cm
Mean sample size per strain22.7   mice 23.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17188010.3524 17188010.3524 1.5921 0.2078
strain 8 2275728186.1048 284466023.2631 26.3495 < 0.0001
sex:strain 8 47665750.5741 5958218.8218 0.5519 0.817
Residuals 394 4253571427.7628 10795866.5679


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1195.0 2391.0   6 976.2 2.0016 -1.22
129S1/SvImJ m 1083.0 758.2   6 309.5 0.7004 -1.29
A/J f 2460.0 1035.0   11 311.9 0.4206 432.2, 4223.0 -0.96
A/J m 3058.0 1532.0   12 442.3 0.5011 431.6, 5605.0 -0.83
C57BL/6J f 6003.0 3365.0   6 1374.0 0.5605 -0.25
C57BL/6J m 6309.0 1418.0   7 535.8 0.2247 4841.0, 8974.0 -0.08
CAST/EiJ f 15181.0 5213.0   6 2128.0 0.3434 9690.0, 23563.0 1.61
CAST/EiJ m 13783.0 10250.0   5 4584.0 0.7437 7397.0, 31972.0 1.65
J:DO f 6046.0 3746.0   147 309.0 0.6196 771.7, 17908.0 -0.24
J:DO m 5782.0 2808.0   149 230.1 0.4857 616.9, 15387.0 -0.2
NOD/ShiLtJ f 11782.0 2517.0   6 1028.0 0.2136 7862.0, 15048.0 0.92
NOD/ShiLtJ m 11114.0 2778.0   6 1134.0 0.25 8120.0, 16161.0 1.03
NZO/HlLtJ f 1857.0 750.9   6 306.6 0.4043 868.6, 3006.0 -1.09
NZO/HlLtJ m 1577.0 769.5   7 290.8 0.4878 578.8, 2565.0 -1.17
PWK/PhJ f 9103.0 2252.0   9 750.5 0.2474 6522.0, 12975.0 0.38
PWK/PhJ m 9300.0 2738.0   9 912.7 0.2944 7322.0, 15736.0 0.61
WSB/EiJ f 11358.0 4394.0   7 1661.0 0.3868 6512.0, 20347.0 0.84
WSB/EiJ m 7810.0 2928.0   7 1107.0 0.375 4064.0, 12331.0 0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1194.6666666667 1341.3840220661 3831.8319482869 -1442.4986149536
129S1/SvImJ m 1082.6333333333 1341.3840220661 3719.7986149535 -1554.5319482869
A/J f 2459.7454545455 990.6777555118 4407.4210933869 512.0698157041
A/J m 3057.9666666667 948.5017381782 4922.7241204101 1193.2092129233
C57BL/6J f 6003.0000000001 1341.3840220661 8640.1652816203 3365.8347183798
C57BL/6J m 6309.0000000001 1241.8802891426 8750.5406241464 3867.4593758537
CAST/EiJ f 15181.0000000001 1341.3840220661 17818.1652816204 12543.8347183799
CAST/EiJ m 13783.2000000001 1469.4125743253 16672.0698252258 10894.3301747744
J:DO f 6046.4727891157 271.0004966224 6579.2606330423 5513.684945189
J:DO m 5781.5154362416 269.1755566942 6310.7154424273 5252.3154300559
NOD/ShiLtJ f 11781.5 1341.3840220661 14418.6652816203 9144.3347183798
NOD/ShiLtJ m 11114.0 1341.3840220661 13751.1652816203 8476.8347183798
NZO/HlLtJ f 1857.2666666667 1341.3840220661 4494.431948287 -779.8986149535
NZO/HlLtJ m 1577.4142857143 1241.8802891426 4018.9549098606 -864.1263384321
PWK/PhJ f 9102.6666666667 1095.2354677281 11255.9031024509 6949.4302308825
PWK/PhJ m 9300.1111111111 1095.2354677281 11453.3475468953 7146.8746753269
WSB/EiJ f 11357.8571428572 1241.8802891426 13799.3977670035 8916.3165187108
WSB/EiJ m 7809.7142857143 1241.8802891426 10251.2549098606 5368.173661568


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1138.65 948.5017381782 3003.4074537434 -726.1074537434
A/J both 2758.8560606061 685.7656236997 4107.0734721748 1410.6386490374
C57BL/6J both 6156.0000000001 913.9991448594 7952.9252448239 4359.0747551763
CAST/EiJ both 14482.1000000001 994.7970155061 16437.8741171774 12526.3258828228
J:DO both 5913.9941126786 190.9821650647 6289.4656605964 5538.5225647609
NOD/ShiLtJ both 11447.75 948.5017381782 13312.5074537434 9582.9925462566
NZO/HlLtJ both 1717.3404761905 913.9991448594 3514.2657210143 -79.5847686333
PWK/PhJ both 9201.3888888889 774.4484262265 10723.9569741299 7678.8208036479
WSB/EiJ both 9583.7857142857 878.1419738746 11310.215646162 7857.3557824094




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA