Project measure / variable:   CSNA03   dist_f30_cont_in_d9

ID, description, units MPD:90358   dist_f30_cont_in_d9   distance traveled, first 30 min (pre-injection), on successive days, saline group, founders   [cm]  day 9  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, saline group, founders day 9



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6662.0   cm 5059.0   cm
Median of the strain means6098.0   cm 5826.0   cm
SD of the strain means± 5000.0 ± 3112.0
Coefficient of variation (CV)0.7505 0.6151
Min–max range of strain means339.8   –   15363.0   cm 559.2   –   8437.0   cm
Mean sample size per strain6.9   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 73872266.719 73872266.719 6.9456 0.0097
strain 8 1757331079.5661 219666384.9458 20.6535 < 0.0001
sex:strain 8 158813816.6233 19851727.0779 1.8665 0.0731
Residuals 104 1106124132.4676 10635808.966


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 339.8 416.8   8 147.4 1.2268 -1.26
129S1/SvImJ m 559.2 820.7   8 290.1 1.4675 -1.45
A/J f 1635.0 893.4   7 337.7 0.5464 624.5, 2848.0 -1.01
A/J m 1780.0 947.9   8 335.1 0.5325 756.7, 3619.0 -1.05
C57BL/6J f 6098.0 1357.0   7 513.1 0.2226 4794.0, 8913.0 -0.11
C57BL/6J m 4914.0 1148.0   6 468.8 0.2337 3443.0, 6040.0 -0.05
CAST/EiJ f 11288.0 2300.0   7 869.2 0.2037 9416.0, 15260.0 0.93
CAST/EiJ m 8437.0 2616.0   7 988.9 0.3101 5447.0, 13091.0 1.09
DBA/2J f 5420.0 899.4   3 519.3 0.1659 4445.0, 6217.0 -0.25
DBA/2J m 7133.0 4173.0   2   2951.0 0.5851 4182.0, 10084.0 0.67
NOD/ShiLtJ f 15363.0 14751.0   5 6597.0 0.9602 5757.0, 40822.0 1.74
NOD/ShiLtJ m 7346.0 1875.0   5 838.3 0.2552 4966.0, 9254.0 0.73
NZO/HlLtJ f 1739.0 685.7   10 216.8 0.3942 951.3, 2931.0 -0.98
NZO/HlLtJ m 1250.0 670.1   9 223.4 0.536 461.5, 2765.0 -1.22
PWK/PhJ f 9411.0 1853.0   8 655.1 0.1969 6817.0, 12978.0 0.55
PWK/PhJ m 8287.0 2191.0   8 774.8 0.2645 5247.0, 12772.0 1.04
WSB/EiJ f 8668.0 2019.0   7 763.0 0.2329 6432.0, 12382.0 0.4
WSB/EiJ m 5826.0 937.7   7 354.4 0.1609 4751.0, 7318.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 339.788375 1153.0291066379 2626.288362591 -1946.7116125911
129S1/SvImJ m 559.23625 1153.0291066379 2845.7362375911 -1727.2637375911
A/J f 1635.1285714286 1232.6399640049 4079.4998766939 -809.2427338367
A/J m 1779.9125 1153.0291066379 4066.412487591 -506.5874875911
C57BL/6J f 6098.4285714286 1232.6399640049 8542.7998766939 3654.0572661633
C57BL/6J m 4913.6666666667 1331.4033302018 7553.8894333422 2273.4438999911
CAST/EiJ f 11288.1428571428 1232.6399640049 13732.5141624082 8843.7715518775
CAST/EiJ m 8436.5714285714 1232.6399640049 10880.9427338367 5992.2001233061
DBA/2J f 5420.3333333333 1882.8886465601 9154.1721776521 1686.4944890146
DBA/2J m 7133.0 2306.0582132759 11705.9999751821 2560.0000248179
NOD/ShiLtJ f 15362.6 1458.479274178 18254.8191322938 12470.3808677062
NOD/ShiLtJ m 7346.2 1458.479274178 10238.4191322938 4453.9808677063
NZO/HlLtJ f 1739.33 1031.3005849913 3784.4377611224 -305.7777611224
NZO/HlLtJ m 1250.2333333333 1087.0862669455 3405.9661952114 -905.4995285448
PWK/PhJ f 9410.75 1153.0291066379 11697.2499875911 7124.2500124089
PWK/PhJ m 8286.625 1153.0291066379 10573.1249875911 6000.1250124089
WSB/EiJ f 8667.8571428571 1232.6399640049 11112.2284481225 6223.4858375918
WSB/EiJ m 5826.1428571429 1232.6399640049 8270.5141624082 3381.7715518775


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 449.5123125 815.3147002092 2066.3119589086 -1167.2873339086
A/J both 1707.5205357143 843.9308919598 3381.0671642295 33.9739071991
C57BL/6J both 5506.0476190476 907.1984496975 7305.0561887657 3707.0390493295
CAST/EiJ both 9862.3571428571 871.6080773094 11590.788668548 8133.9256171662
DBA/2J both 6276.6666666667 1488.5541759004 9228.5254576812 3324.8078756521
NOD/ShiLtJ both 11354.4 1031.3005849913 13399.5077611225 9309.2922388776
NZO/HlLtJ both 1494.7816666667 749.2225050653 2980.5180098972 9.0453234361
PWK/PhJ both 8848.6875 815.3147002092 10465.4871464086 7231.8878535914
WSB/EiJ both 7247.0 871.6080773094 8975.4315256909 5518.5684743091




  GWAS USING LINEAR MIXED MODELS