Project measure / variable:   CSNA03   dist_f30_cocaine_do_d7

ID, description, units MPD:90357   dist_f30_cocaine_do_d7   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, DO   [cm]  day 7  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means7716.0   cm 5890.0   cm
Median of the strain means6625.0   cm 6621.0   cm
SD of the strain means± 6204.0 ± 3406.0
Coefficient of variation (CV)0.8039 0.5783
Min–max range of strain means579.6   –   20554.0   cm 1155.0   –   10604.0   cm
Mean sample size per strain27.0   mice 28.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 29083090.973 29083090.973 2.1876 0.1398
strain 8 2368918036.9492 296114754.6186 22.2732 < 0.0001
sex:strain 8 414139613.0203 51767451.6275 3.8938 0.0002
Residuals 477 6341568336.0892 13294692.5285


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 579.6 1095.0   6 447.0 1.8893 -1.15
129S1/SvImJ m 1155.0 1052.0   6 429.7 0.9108 64.6, 2791.0 -1.39
A/J f 2345.0 1425.0   12 411.3 0.6077 273.7, 4641.0 -0.87
A/J m 2534.0 1274.0   12 367.9 0.5029 710.6, 5535.0 -0.99
C57BL/6J f 6625.0 1285.0   5 574.7 0.194 4522.0, 7990.0 -0.18
C57BL/6J m 6621.0 1302.0   7 492.2 0.1967 4409.0, 8839.0 0.21
CAST/EiJ f 20554.0 15770.0   6 6438.0 0.7672 8587.0, 50704.0 2.07
CAST/EiJ m 8487.0 2233.0   5 998.8 0.2632 6935.0, 12362.0 0.76
J:DO f 5964.0 3864.0   186 283.3 0.6478 240.9, 26684.0 -0.28
J:DO m 5899.0 3124.0   193 224.9 0.5296 602.9, 18812.0 0.0
NOD/ShiLtJ f 12062.0 3339.0   6 1363.0 0.2768 6994.0, 15725.0 0.7
NOD/ShiLtJ m 10604.0 2919.0   6 1192.0 0.2753 7599.0, 15541.0 1.38
NZO/HlLtJ f 2007.0 599.8   6 244.9 0.2988 1160.0, 2530.0 -0.92
NZO/HlLtJ m 1699.0 694.7   7 262.6 0.4089 847.5, 2646.0 -1.23
PWK/PhJ f 9559.0 2011.0   9 670.5 0.2104 6095.0, 12414.0 0.3
PWK/PhJ m 9252.0 3088.0   9 1029.0 0.3338 5547.0, 14447.0 0.99
WSB/EiJ f 9751.0 4889.0   7 1848.0 0.5014 3186.0, 16783.0 0.33
WSB/EiJ m 6758.0 1777.0   7 671.5 0.2629 4262.0, 8829.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 579.5633333335 1488.5503310542 3504.4899015635 -2345.3632348965
129S1/SvImJ m 1155.4983333333 1488.5503310542 4080.4249015634 -1769.4282348967
A/J f 2344.7416666666 1052.5640332259 4412.9770775348 276.5062557984
A/J m 2533.8 1052.5640332259 4602.0354108681 465.5645891318
C57BL/6J f 6624.8 1630.6251886003 9828.8965209315 3420.7034790685
C57BL/6J m 6621.2857142857 1378.129816013 9329.2415215118 3913.3299070596
CAST/EiJ f 20554.1666666665 1488.5503310542 23479.0932348965 17629.2400984365
CAST/EiJ m 8486.7999999998 1630.6251886003 11690.8965209313 5282.7034790683
J:DO f 5964.0080645161 267.351531791 6489.3403842092 5438.675744823
J:DO m 5899.3378238342 262.4584105074 6415.0554061915 5383.6202414769
NOD/ShiLtJ f 12062.3333333333 1488.5503310542 14987.2599015633 9137.4067651033
NOD/ShiLtJ m 10603.8333333333 1488.5503310542 13528.7599015633 7678.9067651033
NZO/HlLtJ f 2007.3333333334 1488.5503310542 4932.2599015634 -917.5932348967
NZO/HlLtJ m 1698.8857142857 1378.129816013 4406.8415215118 -1009.0700929404
PWK/PhJ f 9559.4444444444 1215.3962558446 11947.6369868689 7171.25190202
PWK/PhJ m 9252.3333333333 1215.3962558446 11640.5258757578 6864.1407909089
WSB/EiJ f 9751.0 1378.129816013 12458.9558072261 7043.0441927739
WSB/EiJ m 6757.8571428572 1378.129816013 9465.8129500833 4049.9013356311


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 867.5308333334 1052.5640332259 2935.7662442016 -1200.7045775347
A/J both 2439.2708333333 744.2751655271 3901.7341174483 976.8075492183
C57BL/6J both 6623.0428571429 1067.4947652661 8720.6164058734 4525.4693084124
CAST/EiJ both 14520.4833333332 1103.938471313 16689.6669323505 12351.2997343159
J:DO both 5931.6729441752 187.3240900132 6299.7553639084 5563.590524442
NOD/ShiLtJ both 11333.0833333333 1052.5640332259 13401.3187442015 9264.8479224652
NZO/HlLtJ both 1853.1095238095 1014.276081482 3846.1110343099 -139.8919866909
PWK/PhJ both 9405.8888888889 859.4149343364 11094.5960304164 7717.1817473614
WSB/EiJ both 8254.4285714286 974.4849382582 10169.2424858717 6339.6146569855




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA