Project measure / variable:   CSNA03   dist_f30_cont_in_d7

ID, description, units MPD:90352   dist_f30_cont_in_d7   distance traveled, first 30 min (pre-injection), on successive days, saline group, founders   [cm]  day 7  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, saline group, founders day 7



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6259.0   cm 5065.0   cm
Median of the strain means5504.0   cm 5719.0   cm
SD of the strain means± 4681.0 ± 3164.0
Coefficient of variation (CV)0.748 0.6247
Min–max range of strain means499.4   –   12872.0   cm 701.4   –   9105.0   cm
Mean sample size per strain6.9   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 48939150.7225 48939150.7225 10.0838 0.002
strain 8 1706612009.061 213326501.1326 43.9554 < 0.0001
sex:strain 8 97899309.7357 12237413.717 2.5215 0.0151
Residuals 104 504737773.557 4853247.8227


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 499.4 576.2   8 203.7 1.1538 -1.23
129S1/SvImJ m 701.4 693.4   8 245.1 0.9885 148.3, 2028.0 -1.38
A/J f 1571.0 537.0   7 203.0 0.3418 803.6, 2267.0 -1.0
A/J m 1518.0 685.9   8 242.5 0.452 850.2, 2639.0 -1.12
C57BL/6J f 5504.0 606.4   7 229.2 0.1102 4948.0, 6414.0 -0.16
C57BL/6J m 5484.0 1046.0   6 427.1 0.1908 3885.0, 6613.0 0.13
CAST/EiJ f 12255.0 2282.0   7 862.6 0.1862 8892.0, 15195.0 1.28
CAST/EiJ m 9105.0 3466.0   7 1310.0 0.3807 5082.0, 16028.0 1.28
DBA/2J f 3875.0 1887.0   3 1090.0 0.487 1696.0, 4999.0 -0.51
DBA/2J m 6032.0 3697.0   2   2614.0 0.6129 3418.0, 8647.0 0.31
NOD/ShiLtJ f 12872.0 7630.0   5 3412.0 0.5928 5919.0, 25430.0 1.41
NOD/ShiLtJ m 8035.0 1704.0   5 762.2 0.2121 5557.0, 9928.0 0.94
NZO/HlLtJ f 1841.0 889.5   10 281.3 0.4833 753.0, 3495.0 -0.94
NZO/HlLtJ m 1244.0 670.1   9 223.4 0.5386 437.7, 2281.0 -1.21
PWK/PhJ f 8669.0 1708.0   8 604.0 0.1971 6474.0, 12099.0 0.51
PWK/PhJ m 7749.0 2308.0   8 816.0 0.2978 5811.0, 12806.0 0.85
WSB/EiJ f 9241.0 2607.0   7 985.5 0.2822 5010.0, 13207.0 0.64
WSB/EiJ m 5719.0 1190.0   7 449.7 0.208 4362.0, 7217.0 0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 499.4125 778.8812347418 2043.9632171669 -1045.138217167
129S1/SvImJ m 701.4 778.8812347418 2245.9507171669 -843.150717167
A/J f 1570.9428571429 832.6590643975 3222.1370286099 -80.2513143242
A/J m 1517.625 778.8812347418 3062.1757171669 -26.925717167
C57BL/6J f 5504.0 832.6590643975 7155.1941714671 3852.8058285329
C57BL/6J m 5484.0 899.3745810898 7267.4935446667 3700.5064553332
CAST/EiJ f 12254.7142857143 832.6590643975 13905.9084571813 10603.5201142472
CAST/EiJ m 9104.8571428571 832.6590643975 10756.0513143242 7453.6629713901
DBA/2J f 3874.6666666667 1271.9077302309 6396.9074259392 1352.4259073941
DBA/2J m 6032.5 1557.7624694836 9121.6014343339 2943.3985656661
NOD/ShiLtJ f 12871.8 985.2154914193 14825.5192911577 10918.0807088424
NOD/ShiLtJ m 8035.4 985.2154914193 9989.1192911577 6081.6807088424
NZO/HlLtJ f 1840.52 696.6525549126 3222.0081593125 459.0318406875
NZO/HlLtJ m 1244.1777777778 734.3362704332 2700.3941591048 -212.0386035493
PWK/PhJ f 8669.125 778.8812347418 10213.675717167 7124.5742828331
PWK/PhJ m 7749.25 778.8812347418 9293.800717167 6204.699282833
WSB/EiJ f 9241.0 832.6590643975 10892.1941714671 7589.8058285329
WSB/EiJ m 5718.8571428571 832.6590643975 7370.0513143242 4067.6629713901


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 600.40625 550.7522028249 1692.5685359953 -491.7560359953
A/J both 1544.2839285714 570.0826903521 2674.7792967384 413.7885604045
C57BL/6J both 5494.0 612.8204783282 6709.2460055226 4278.7539944774
CAST/EiJ both 10679.7857142857 588.7788708519 11847.3563099858 9512.2151185856
DBA/2J both 4953.5833333333 1005.5313502761 6947.5897349868 2959.5769316799
NOD/ShiLtJ both 10453.6 696.6525549126 11835.0881593126 9072.1118406875
NZO/HlLtJ both 1542.3488888889 506.1063476039 2545.9767685791 538.7210091987
PWK/PhJ both 8209.1875 550.7522028249 9301.3497859953 7117.0252140047
WSB/EiJ both 7479.9285714286 588.7788708519 8647.4991671286 6312.3579757285




  GWAS USING LINEAR MIXED MODELS