Project measure / variable:   CSNA03   dist_f30_cont_in_d5

ID, description, units MPD:90346   dist_f30_cont_in_d5   distance traveled, first 30 min (pre-injection), on successive days, saline group, founders   [cm]  day 5  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, saline group, founders day 5



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6559.0   cm 5248.0   cm
Median of the strain means6369.0   cm 5319.0   cm
SD of the strain means± 4798.0 ± 3976.0
Coefficient of variation (CV)0.7315 0.7577
Min–max range of strain means512.2   –   12497.0   cm 549.9   –   12434.0   cm
Mean sample size per strain6.9   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 40686573.7257 40686573.7257 5.1464 0.0254
strain 8 2144207223.708 268025902.9635 33.9021 < 0.0001
sex:strain 8 106696503.3434 13337062.9179 1.687 0.1103
Residuals 103 814306248.3586 7905885.9064


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 512.2 675.8   8 238.9 1.3194 -1.26
129S1/SvImJ m 549.9 843.4   8 298.2 1.5338 -1.18
A/J f 1307.0 725.3   7 274.1 0.555 445.7, 2544.0 -1.09
A/J m 1498.0 888.8   8 314.2 0.5934 483.2, 2584.0 -0.94
C57BL/6J f 6369.0 1537.0   7 580.8 0.2413 5461.0, 9787.0 -0.04
C57BL/6J m 5319.0 1088.0   6 444.3 0.2046 3624.0, 6608.0 0.02
CAST/EiJ f 11229.0 2123.0   7 802.3 0.1891 9416.0, 15508.0 0.97
CAST/EiJ m 12434.0 8601.0   7 3251.0 0.6917 5482.0, 29980.0 1.81
DBA/2J f 4895.0 1092.0   3 630.4 0.2231 3712.0, 5864.0 -0.35
DBA/2J m 3564.0 3879.0   2   2743.0 1.0881 821.9, 6307.0 -0.42
NOD/ShiLtJ f 12497.0 6112.0   5 2734.0 0.4891 7598.0, 22277.0 1.24
NOD/ShiLtJ m 7992.0 2113.0   5 945.0 0.2644 4946.0, 10283.0 0.69
NZO/HlLtJ f 1304.0 510.2   10 161.4 0.3913 640.1, 2595.0 -1.1
NZO/HlLtJ m 1003.0 477.6   9 159.2 0.4761 406.4, 1845.0 -1.07
PWK/PhJ f 9433.0 1923.0   8 679.8 0.2038 6015.0, 12298.0 0.6
PWK/PhJ m 8045.0 2085.0   7 788.0 0.2592 6042.0, 11936.0 0.7
WSB/EiJ f 11488.0 3241.0   7 1225.0 0.2821 5882.0, 16404.0 1.03
WSB/EiJ m 6828.0 657.2   7 248.4 0.0962 5880.0, 7938.0 0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 512.223625 994.1004669043 2483.7874373138 -1459.3401873138
129S1/SvImJ m 549.875 994.1004669043 2521.4388123138 -1421.6888123138
A/J f 1306.8571428571 1062.7381014822 3414.5475148115 -800.8332290972
A/J m 1497.7375 994.1004669043 3469.3013123138 -473.8263123138
C57BL/6J f 6369.0 1062.7381014822 8476.6903719543 4261.3096280457
C57BL/6J m 5318.6666666667 1147.8883443374 7595.2324621945 3042.1008711389
CAST/EiJ f 11228.5714285714 1062.7381014822 13336.2618005257 9120.8810566171
CAST/EiJ m 12433.7142857143 1062.7381014822 14541.4046576686 10326.0239137599
DBA/2J f 4895.3333333333 1623.359264652 8114.8835570034 1675.7831096632
DBA/2J m 3564.45 1988.2009338086 7507.5776246276 -378.6776246276
NOD/ShiLtJ f 12496.8 1257.4486793817 14990.6528797106 10002.9471202895
NOD/ShiLtJ m 7992.0 1257.4486793817 10485.8528797106 5498.1471202895
NZO/HlLtJ f 1303.81 889.1504881849 3067.2302825249 -459.6102825249
NZO/HlLtJ m 1003.1444444445 937.2469084383 2861.9526327499 -855.663743861
PWK/PhJ f 9432.875 994.1004669043 11404.4388123138 7461.3111876862
PWK/PhJ m 8044.8571428571 1062.7381014822 10152.5475148115 5937.1667709028
WSB/EiJ f 11487.7142857143 1062.7381014822 13595.4046576686 9380.02391376
WSB/EiJ m 6828.4285714286 1062.7381014822 8936.1189433829 4720.7381994742


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 531.0493125 702.9351813287 1925.1554537291 -863.0568287291
A/J both 1402.2973214286 727.6070386275 2845.3342726234 -40.7396297662
C57BL/6J both 5843.8333333333 782.1540646522 7395.0514454469 4292.6152212198
CAST/EiJ both 11831.1428571428 751.4693181834 13321.5050117934 10340.7807024923
DBA/2J both 4229.8916666667 1283.3781842591 6775.1696036922 1684.6137296411
NOD/ShiLtJ both 10244.4 889.1504881849 12007.820282525 8480.9797174751
NZO/HlLtJ both 1153.4772222222 645.952853933 2434.5723566416 -127.6179121971
PWK/PhJ both 8738.8660714286 727.6070386275 10181.9030226234 7295.8291202338
WSB/EiJ both 9158.0714285714 751.4693181834 10648.4335832219 7667.7092739209




  GWAS USING LINEAR MIXED MODELS