Project measure / variable:   CSNA03   dist_f30_cocaine_do_d3

ID, description, units MPD:90345   dist_f30_cocaine_do_d3   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, DO   [cm]  day 3  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6470.0   cm 5593.0   cm
Median of the strain means6854.0   cm 5672.0   cm
SD of the strain means± 4528.0 ± 3571.0
Coefficient of variation (CV)0.6999 0.6386
Min–max range of strain means424.4   –   12992.0   cm 743.2   –   10234.0   cm
Mean sample size per strain27.1   mice 28.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 41484146.1491 41484146.1491 5.7597 0.0168
strain 8 1838702463.7626 229837807.9703 31.9108 < 0.0001
sex:strain 8 56220330.545 7027541.3181 0.9757 0.4541
Residuals 478 3442794258.4044 7202498.4485


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 424.4 692.0   6 282.5 1.6306 -1.34
129S1/SvImJ m 743.2 779.2   6 318.1 1.0484 13.189, 2187.0 -1.36
A/J f 2268.0 1069.0   12 308.5 0.4712 473.8, 3558.0 -0.93
A/J m 2422.0 1309.0   12 378.0 0.5406 332.4, 5507.0 -0.89
C57BL/6J f 6854.0 552.7   5 247.2 0.0806 5988.0, 7374.0 0.08
C57BL/6J m 5672.0 810.6   7 306.4 0.1429 4275.0, 6468.0 0.02
CAST/EiJ f 12992.0 7531.0   6 3074.0 0.5796 8630.0, 27922.0 1.44
CAST/EiJ m 8296.0 1535.0   5 686.5 0.185 6706.0, 10702.0 0.76
J:DO f 5276.0 3170.0   187 231.8 0.6008 755.7, 23034.0 -0.26
J:DO m 4804.0 2328.0   193 167.6 0.4847 202.2, 11642.0 -0.22
NOD/ShiLtJ f 10587.0 1771.0   6 723.2 0.1673 7642.0, 12587.0 0.91
NOD/ShiLtJ m 10234.0 2480.0   6 1013.0 0.2423 7480.0, 13294.0 1.3
NZO/HlLtJ f 916.2 437.2   6 178.5 0.4771 284.7, 1646.0 -1.23
NZO/HlLtJ m 1008.0 411.2   7 155.4 0.408 578.5, 1682.0 -1.28
PWK/PhJ f 9248.0 1437.0   9 478.9 0.1554 7110.0, 11491.0 0.61
PWK/PhJ m 8315.0 2436.0   9 811.9 0.2929 4813.0, 12469.0 0.76
WSB/EiJ f 9662.0 1933.0   7 730.6 0.2001 6949.0, 11918.0 0.71
WSB/EiJ m 8842.0 3240.0   7 1224.0 0.3664 5644.0, 15495.0 0.91


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 424.4166666668 1095.6351619452 2577.2732237765 -1728.4398904428
129S1/SvImJ m 743.1981666667 1095.6351619452 2896.0547237764 -1409.658390443
A/J f 2268.3166666667 774.7310527179 3790.6161371209 746.0171962125
A/J m 2422.1166666667 774.7310527179 3944.4161371209 899.8171962125
C57BL/6J f 6854.0000000001 1200.2081859865 9212.3361988039 4495.6638011963
C57BL/6J m 5671.7142857144 1014.3610549465 7664.8721582137 3678.5564132151
CAST/EiJ f 12992.5000000001 1095.6351619452 15145.3565571098 10839.6434428904
CAST/EiJ m 8295.8000000001 1200.2081859865 10654.1361988039 5937.4638011964
J:DO f 5276.428342246 196.2550240992 5662.0575463578 4890.7991381343
J:DO m 4803.7238341969 193.180342714 5183.311476107 4424.1361922868
NOD/ShiLtJ f 10587.0 1095.6351619452 12739.8565571097 8434.1434428903
NOD/ShiLtJ m 10234.0 1095.6351619452 12386.8565571097 8081.1434428903
NZO/HlLtJ f 916.2500000001 1095.6351619452 3069.1065571098 -1236.6065571096
NZO/HlLtJ m 1007.8 1014.3610549465 3000.9578724993 -985.3578724993
PWK/PhJ f 9248.1111111111 894.5823636725 11005.911129219 7490.3110930032
PWK/PhJ m 8314.6666666667 894.5823636725 10072.4666847746 6556.8666485588
WSB/EiJ f 9662.0 1014.3610549465 11655.1578724993 7668.8421275007
WSB/EiJ m 8842.0 1014.3610549465 10835.1578724993 6848.8421275007


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 583.8074166668 774.7310527179 2106.1068871209 -938.4920537874
A/J both 2345.2166666667 547.8175809726 3421.6449452215 1268.7883881118
C57BL/6J both 6262.8571428572 785.7206945698 7806.7505921676 4718.9636935468
CAST/EiJ both 10644.1500000001 812.5447830427 12240.7511541772 9047.548845823
J:DO both 5040.0760882215 137.6904855966 5310.6295307031 4769.5226457398
NOD/ShiLtJ both 10410.5 774.7310527179 11932.7994704542 8888.2005295458
NZO/HlLtJ both 962.025 746.5495224503 2428.9494748961 -504.899474896
PWK/PhJ both 8781.3888888889 632.5652556827 10024.3412016628 7538.436576115
WSB/EiJ both 9252.0 717.2615805242 10661.3754476196 7842.6245523804




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA