Project measure / variable:   CSNA03   dist_f30_cocaine_do_d2

ID, description, units MPD:90339   dist_f30_cocaine_do_d2   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, DO   [cm]  day 2  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6758.0   cm 5859.0   cm
Median of the strain means6447.0   cm 5460.0   cm
SD of the strain means± 4559.0 ± 3558.0
Coefficient of variation (CV)0.6745 0.6072
Min–max range of strain means440.7   –   11771.0   cm 1297.0   –   10995.0   cm
Mean sample size per strain27.1   mice 27.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 58934334.9368 58934334.9368 9.3064 0.0024
strain 8 1876959030.0516 234619878.7564 37.049 < 0.0001
sex:strain 8 51775621.3172 6471952.6647 1.022 0.4182
Residuals 476 3014359570.0993 6332688.1725


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 440.7 840.3   6 343.1 1.9067 -1.39
129S1/SvImJ m 1427.0 981.5   6 400.7 0.688 105.1, 2700.0 -1.25
A/J f 2355.0 1399.0   12 403.8 0.5941 13.189, 4825.0 -0.97
A/J m 2576.0 1160.0   12 334.8 0.4502 180.9, 4850.0 -0.92
C57BL/6J f 6447.0 1041.0   6 425.0 0.1615 4644.0, 7701.0 -0.07
C57BL/6J m 5460.0 797.2   6 325.4 0.146 4163.0, 6412.0 -0.11
CAST/EiJ f 11771.0 1659.0   6 677.2 0.1409 8943.0, 13820.0 1.1
CAST/EiJ m 8288.0 2608.0   5 1166.0 0.3147 5842.0, 12555.0 0.68
J:DO f 5812.0 3017.0   186 221.2 0.5191 573.3, 19244.0 -0.21
J:DO m 5213.0 2245.0   192 162.0 0.4307 233.1, 12697.0 -0.18
NOD/ShiLtJ f 11403.0 1516.0   6 618.8 0.1329 9211.0, 12974.0 1.02
NOD/ShiLtJ m 10995.0 2053.0   6 838.1 0.1867 9228.0, 14489.0 1.44
NZO/HlLtJ f 1349.0 936.1   6 382.1 0.694 463.7, 3003.0 -1.19
NZO/HlLtJ m 1297.0 489.7   7 185.1 0.3775 596.3, 2144.0 -1.28
PWK/PhJ f 10365.0 3279.0   9 1093.0 0.3163 4760.0, 16306.0 0.79
PWK/PhJ m 9282.0 3275.0   9 1092.0 0.3528 4345.0, 14232.0 0.96
WSB/EiJ f 10880.0 1875.0   7 708.8 0.1724 8324.0, 13293.0 0.9
WSB/EiJ m 8192.0 2662.0   7 1006.0 0.3249 6106.0, 13777.0 0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 440.7166666666 1027.35000304 2459.4185634313 -1577.9852300982
129S1/SvImJ m 1426.6499999999 1027.35000304 3445.3518967646 -592.0518967649
A/J f 2354.5490833333 726.4461538016 3781.9868837298 927.1112829368
A/J m 2575.9916666666 726.4461538016 4003.4294670631 1148.5538662701
C57BL/6J f 6446.6666666665 1027.35000304 8465.3685634312 4427.9647699018
C57BL/6J m 5460.4999999998 1027.35000304 7479.2018967646 3441.7981032351
CAST/EiJ f 11771.3333333333 1027.35000304 13790.0352300981 9752.6314365686
CAST/EiJ m 8287.5999999999 1125.405542236 10498.9771314729 6076.2228685269
J:DO f 5811.902688172 184.5175075832 6174.4722520425 5449.3331243016
J:DO m 5213.1770833333 181.6115384504 5570.0365334324 4856.3176332342
NOD/ShiLtJ f 11402.8333333333 1027.35000304 13421.535230098 9384.1314365686
NOD/ShiLtJ m 10994.8333333333 1027.35000304 13013.535230098 8976.1314365686
NZO/HlLtJ f 1348.75 1027.35000304 3367.4518967647 -669.9518967647
NZO/HlLtJ m 1297.0428571428 951.1412823158 3165.9976486166 -571.9119343309
PWK/PhJ f 10364.5555555555 838.8277648982 12012.8187521762 8716.2923589348
PWK/PhJ m 9282.0 838.8277648982 10930.2631966207 7633.7368033792
WSB/EiJ f 10879.5714285714 951.1412823158 12748.5262200452 9010.6166370977
WSB/EiJ m 8192.1428571428 951.1412823158 10061.0976486166 6323.1880656691


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 933.6833333332 726.4461538016 2361.1211337297 -493.7544670633
A/J both 2465.2703749999 513.67500152 3474.6213233823 1455.9194266176
C57BL/6J both 5953.5833333332 726.4461538016 7381.0211337296 4526.1455329367
CAST/EiJ both 10029.4666666666 761.9031538263 11526.576061935 8532.3572713982
J:DO both 5512.5398857527 129.4502428571 5766.9044645418 5258.1753069636
NOD/ShiLtJ both 11198.8333333333 726.4461538016 12626.2711337298 9771.3955329368
NZO/HlLtJ both 1322.8964285714 700.0210296255 2698.4099109276 -52.6170537848
PWK/PhJ both 9823.2777777777 593.1408008071 10988.7758612885 8657.779694267
WSB/EiJ both 9535.8571428571 672.558450592 10857.4077496393 8214.3065360749




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA