Project measure / variable:   CSNA03   dist_f30_cocaine_in_d2

ID, description, units MPD:90337   dist_f30_cocaine_in_d2   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, founders   [cm]  day 2  
cocaine study
Data set, strains CSNA03   inbred w/CC8   10 strains     sex: both     age: 8-14wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, cocaine group, founders day 2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means6621.0   cm 5626.0   cm
Median of the strain means6330.0   cm 5238.0   cm
SD of the strain means± 4328.0 ± 3424.0
Coefficient of variation (CV)0.6536 0.6087
Min–max range of strain means440.7   –   11771.0   cm 1297.0   –   10995.0   cm
Mean sample size per strain6.2   mice 6.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 26932677.6272 26932677.6272 7.3791 0.0077
strain 8 1845036521.7315 230629565.2164 63.1884 < 0.0001
sex:strain 8 51829435.957 6478679.4946 1.775 0.0901
Residuals 105 383236295.4281 3649869.4803


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 440.7 840.3   6 343.1 1.9067 -1.43
129S1/SvImJ m 1427.0 981.5   6 400.7 0.688 105.1, 2700.0 -1.23
A/J f 2355.0 1399.0   12 403.8 0.5941 13.189, 4825.0 -0.99
A/J m 2576.0 1160.0   12 334.8 0.4502 180.9, 4850.0 -0.89
C57BL/6J f 6447.0 1041.0   6 425.0 0.1615 4644.0, 7701.0 -0.04
C57BL/6J m 5460.0 797.2   6 325.4 0.146 4163.0, 6412.0 -0.05
C57BL/6NJ f 6214.0 0.0   1   0.0 0.0 6214.0, 6214.0 -0.09
C57BL/6NJ m 3728.0 0.0   1   0.0 0.0 3728.0, 3728.0 -0.55
CAST/EiJ f 11771.0 1659.0   6 677.2 0.1409 8943.0, 13820.0 1.19
CAST/EiJ m 8288.0 2608.0   5 1166.0 0.3147 5842.0, 12555.0 0.78
DBA/2J f 4990.0 1611.0   3 930.3 0.3229 3666.0, 6784.0 -0.38
DBA/2J m 5017.0 1829.0   4 914.5 0.3645 3405.0, 7619.0 -0.18
NOD/ShiLtJ f 11403.0 1516.0   6 618.8 0.1329 9211.0, 12974.0 1.1
NOD/ShiLtJ m 10995.0 2053.0   6 838.1 0.1867 9228.0, 14489.0 1.57
NZO/HlLtJ f 1349.0 936.1   6 382.1 0.694 463.7, 3003.0 -1.22
NZO/HlLtJ m 1297.0 489.7   7 185.1 0.3775 596.3, 2144.0 -1.26
PWK/PhJ f 10365.0 3279.0   9 1093.0 0.3163 4760.0, 16306.0 0.86
PWK/PhJ m 9282.0 3275.0   9 1092.0 0.3528 4345.0, 14232.0 1.07
WSB/EiJ f 10880.0 1875.0   7 708.8 0.1724 8324.0, 13293.0 0.98
WSB/EiJ m 8192.0 2662.0   7 1006.0 0.3249 6106.0, 13777.0 0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 440.7166666667 779.9433184819 1987.2001912471 -1105.7668579137
129S1/SvImJ m 1426.65 779.9433184819 2973.1335245804 -119.8335245804
A/J f 2354.5490833333 551.5032094397 3448.0780705574 1261.0200961093
A/J m 2575.9916666667 551.5032094397 3669.5206538907 1482.4626794426
C57BL/6J f 6446.6666666667 779.9433184819 7993.150191247 4900.1831420863
C57BL/6J m 5460.5 779.9433184819 7006.9835245804 3914.0164754196
CAST/EiJ f 11771.3333333333 779.9433184819 13317.8168579137 10224.849808753
CAST/EiJ m 8287.6 854.385098216 9981.6878224455 6593.5121775545
DBA/2J f 4989.6666666667 1103.0064188794 7176.7246411148 2802.6086922186
DBA/2J m 5017.25 955.2315792869 6911.2977654214 3123.2022345786
NOD/ShiLtJ f 11402.8333333333 779.9433184819 12949.3168579137 9856.349808753
NOD/ShiLtJ m 10994.8333333333 779.9433184819 12541.3168579137 9448.3498087529
NZO/HlLtJ f 1348.75 779.9433184819 2895.2335245804 -197.7335245804
NZO/HlLtJ m 1297.0428571429 722.0872009339 2728.8083881665 -134.7226738807
PWK/PhJ f 10364.5555555556 636.8210528579 11627.2540658365 9101.8570452746
PWK/PhJ m 9282.0 636.8210528579 10544.6985102809 8019.3014897191
WSB/EiJ f 10879.5714285714 722.0872009339 12311.336959595 9447.8058975478
WSB/EiJ m 8192.1428571429 722.0872009339 9623.9083881665 6760.3773261193


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 933.6833333333 551.5032094397 2027.2123205574 -159.8456538907
A/J both 2465.270375 389.971659241 3238.5121372902 1692.0286127098
C57BL/6J both 5953.5833333333 551.5032094397 7047.1123205574 4860.0543461093
CAST/EiJ both 10029.4666666667 578.4214458546 11176.3695441978 8882.5637891355
DBA/2J both 5003.4583333333 729.5701697157 6450.0612091509 3556.8554575158
NOD/ShiLtJ both 11198.8333333333 551.5032094397 12292.3623205574 10105.3043461093
NZO/HlLtJ both 1322.8964285714 531.4417902737 2376.647327459 269.1455296838
PWK/PhJ both 9823.2777777778 450.3004848782 10716.1404569916 8930.415098564
WSB/EiJ both 9535.8571428571 510.5927563884 10548.2682589131 8523.4460268012




  GWAS USING LINEAR MIXED MODELS